BLASTX nr result

ID: Rehmannia30_contig00020160 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00020160
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN08792.1| hypothetical protein CDL12_18629 [Handroanthus im...    71   2e-11
ref|XP_011097526.1| E3 ubiquitin-protein ligase RING1-like isofo...    57   1e-06
ref|XP_020554349.1| E3 ubiquitin-protein ligase RING1-like isofo...    57   1e-06
gb|EYU34575.1| hypothetical protein MIMGU_mgv1a019765mg [Erythra...    55   5e-06
ref|XP_012840819.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    55   5e-06

>gb|PIN08792.1| hypothetical protein CDL12_18629 [Handroanthus impetiginosus]
          Length = 377

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = -1

Query: 455 GRSLEKGPVSMKRSFSFSGKRSLRKNSRSLESISIPEL 342
           GR ++KGPVSMKRSFSFSGKRSLRKNSRSLESISIPEL
Sbjct: 337 GRFIQKGPVSMKRSFSFSGKRSLRKNSRSLESISIPEL 374


>ref|XP_011097526.1| E3 ubiquitin-protein ligase RING1-like isoform X2 [Sesamum indicum]
          Length = 373

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = -1

Query: 455 GRSLEKGPVSMKRSFSFSGKRSLRKN-SRSLESISIPEL 342
           GRSL KGPVSMKRSFSFSGKR LRKN SR+ +S+ IPE+
Sbjct: 329 GRSLAKGPVSMKRSFSFSGKRWLRKNGSRTEDSVPIPEI 367


>ref|XP_020554349.1| E3 ubiquitin-protein ligase RING1-like isoform X1 [Sesamum indicum]
          Length = 378

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = -1

Query: 455 GRSLEKGPVSMKRSFSFSGKRSLRKN-SRSLESISIPEL 342
           GRSL KGPVSMKRSFSFSGKR LRKN SR+ +S+ IPE+
Sbjct: 334 GRSLAKGPVSMKRSFSFSGKRWLRKNGSRTEDSVPIPEI 372


>gb|EYU34575.1| hypothetical protein MIMGU_mgv1a019765mg [Erythranthe guttata]
          Length = 366

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = -1

Query: 449 SLEKGPVSMKRSFSFSGKRSLRKNSRSLESISIPEL-*YTKPKPV 318
           S++KG VSMKRSFSFSGKRS  KNSRS ESI+I EL  YTK + +
Sbjct: 320 SIQKGSVSMKRSFSFSGKRSSSKNSRSQESITIRELAMYTKSQSI 364


>ref|XP_012840819.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Erythranthe
           guttata]
          Length = 393

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = -1

Query: 449 SLEKGPVSMKRSFSFSGKRSLRKNSRSLESISIPEL-*YTKPKPV 318
           S++KG VSMKRSFSFSGKRS  KNSRS ESI+I EL  YTK + +
Sbjct: 347 SIQKGSVSMKRSFSFSGKRSSSKNSRSQESITIRELAMYTKSQSI 391


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