BLASTX nr result

ID: Rehmannia30_contig00018774 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00018774
         (758 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA11329.1| hypothetical protein (mitochondrion) [Nerium ole...    57   7e-06
emb|CAA11332.1| hypothetical protein (mitochondrion) [Catharanth...    57   7e-06
gb|ABY83962.1| endonuclease, partial (mitochondrion) [Ixora sp. ...    56   9e-06

>emb|CAA11329.1| hypothetical protein (mitochondrion) [Nerium oleander]
 emb|CAA11348.1| hypothetical protein (mitochondrion) [Nerium oleander]
          Length = 277

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 28/31 (90%), Positives = 28/31 (90%), Gaps = 3/31 (9%)
 Frame = -2

Query: 217 PVILPIPLDAQSNW---FFDADGTISIAMKH 134
           PVILPIPLDAQSNW   FFDADGTISIAMKH
Sbjct: 142 PVILPIPLDAQSNWFAGFFDADGTISIAMKH 172


>emb|CAA11332.1| hypothetical protein (mitochondrion) [Catharanthus roseus]
          Length = 277

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 28/31 (90%), Positives = 28/31 (90%), Gaps = 3/31 (9%)
 Frame = -2

Query: 217 PVILPIPLDAQSNW---FFDADGTISIAMKH 134
           PVILPIPLDAQSNW   FFDADGTISIAMKH
Sbjct: 142 PVILPIPLDAQSNWFAGFFDADGTISIAMKH 172


>gb|ABY83962.1| endonuclease, partial (mitochondrion) [Ixora sp. Kew 21361]
          Length = 228

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 3/31 (9%)
 Frame = -2

Query: 217 PVILPIPLDAQSNW---FFDADGTISIAMKH 134
           PVILPIPLDAQSNW   FFDADGT+SIAMKH
Sbjct: 93  PVILPIPLDAQSNWFAGFFDADGTLSIAMKH 123


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