BLASTX nr result

ID: Rehmannia30_contig00018420 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00018420
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094422.1| splicing factor U2af small subunit B-like [S...    96   4e-21
gb|PIN03197.1| U2 snRNP splicing factor, small subunit [Handroan...    94   4e-20
ref|XP_011101487.1| splicing factor U2af small subunit B [Sesamu...    70   3e-11
ref|XP_012836089.1| PREDICTED: splicing factor U2af small subuni...    65   2e-09
ref|XP_022846233.1| splicing factor U2af small subunit B-like [O...    64   2e-09
gb|KZV28449.1| hypothetical protein F511_03252 [Dorcoceras hygro...    63   7e-09
ref|XP_015970382.1| splicing factor U2af small subunit B [Arachi...    54   9e-06

>ref|XP_011094422.1| splicing factor U2af small subunit B-like [Sesamum indicum]
 ref|XP_011094423.1| splicing factor U2af small subunit B-like [Sesamum indicum]
 ref|XP_011094424.1| splicing factor U2af small subunit B-like [Sesamum indicum]
          Length = 314

 Score = 96.3 bits (238), Expect = 4e-21
 Identities = 45/61 (73%), Positives = 52/61 (85%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDISHGLEHNDGHSSDNNLRSSAQGNENYD 230
           ESSAERRAKIEQWN+EREE  S+RD++SK+DD SHGL+HN G SSDNNL  S QGN +YD
Sbjct: 254 ESSAERRAKIEQWNKEREEAESARDYSSKSDDNSHGLKHNGGESSDNNLHPSDQGNGSYD 313

Query: 231 F 233
           F
Sbjct: 314 F 314


>gb|PIN03197.1| U2 snRNP splicing factor, small subunit [Handroanthus
           impetiginosus]
          Length = 314

 Score = 93.6 bits (231), Expect = 4e-20
 Identities = 44/60 (73%), Positives = 52/60 (86%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDISHGLEHNDGHSSDNNLRSSAQGNENYD 230
           ESS ERRAKIEQWN+EREE  S+RD+NSKTDDISHG EH+D  S+DNNL+SS +GN +YD
Sbjct: 254 ESSVERRAKIEQWNKEREEAVSARDNNSKTDDISHGHEHHDVPSNDNNLQSSEEGNGSYD 313


>ref|XP_011101487.1| splicing factor U2af small subunit B [Sesamum indicum]
          Length = 313

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDISHGLEHNDGHSSDNNLRSSAQGNENYD 230
           ESSAERRAKIEQWN+ERE   S+ D+++K+DD+SH  +  DG ++D+N   + Q N NYD
Sbjct: 254 ESSAERRAKIEQWNKERE-AESAIDNSNKSDDVSHVHQQKDGPTNDDNQHPAQQENGNYD 312

Query: 231 F 233
           F
Sbjct: 313 F 313


>ref|XP_012836089.1| PREDICTED: splicing factor U2af small subunit B-like [Erythranthe
           guttata]
 ref|XP_012836090.1| PREDICTED: splicing factor U2af small subunit B-like [Erythranthe
           guttata]
 ref|XP_012836091.1| PREDICTED: splicing factor U2af small subunit B-like [Erythranthe
           guttata]
 gb|EYU38608.1| hypothetical protein MIMGU_mgv1a009386mg [Erythranthe guttata]
 gb|EYU38609.1| hypothetical protein MIMGU_mgv1a009386mg [Erythranthe guttata]
          Length = 344

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDI-SHGLEHNDGHSSDNNLRSSAQGNENY 227
           ESSAERRAKIEQWN+ERE G +  ++ SK+DD  S   + NDG   +N+   S Q + NY
Sbjct: 283 ESSAERRAKIEQWNKERETGPAVENNTSKSDDSGSRAYQQNDGQLKENSAPRSQQEDGNY 342

Query: 228 DF 233
           DF
Sbjct: 343 DF 344


>ref|XP_022846233.1| splicing factor U2af small subunit B-like [Olea europaea var.
           sylvestris]
          Length = 276

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDISHGLEHNDGHSSDNNLRSSA---QGNE 221
           ESS ERRAKIEQWNRER++  S+R      +D S+G EH++ HS   N+RS     QGNE
Sbjct: 216 ESSMERRAKIEQWNRERDQAESAR---GNVNDNSNGFEHSESHSDHKNIRSPGSPEQGNE 272

Query: 222 NYD 230
           +Y+
Sbjct: 273 SYN 275


>gb|KZV28449.1| hypothetical protein F511_03252 [Dorcoceras hygrometricum]
          Length = 322

 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 31/60 (51%), Positives = 38/60 (63%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDISHGLEHNDGHSSDNNLRSSAQGNENYD 230
           ESS ERRAKIEQWN+ERE+   + D  S  DD   G EH   + +DNNL    Q +E+YD
Sbjct: 262 ESSVERRAKIEQWNKEREQAEPTGDEKSNFDDSDVGYEHIYENGNDNNLHPPQQRSESYD 321


>ref|XP_015970382.1| splicing factor U2af small subunit B [Arachis duranensis]
          Length = 319

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +3

Query: 51  ESSAERRAKIEQWNREREEGGSSRDHNSKTDDISHGLEHNDGHSSDNN 194
           ESSAERRAKIEQWNRE+E+G S   +N+  +D        +G+ SDN+
Sbjct: 264 ESSAERRAKIEQWNREKEQGDSGNQNNANGNDYKEPSVPKNGNESDNH 311


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