BLASTX nr result

ID: Rehmannia30_contig00017940 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00017940
         (948 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY67897.1| LRR receptor-like serine/threonine-protein kinase...    61   2e-06

>gb|OAY67897.1| LRR receptor-like serine/threonine-protein kinase ERECTA [Ananas
           comosus]
          Length = 806

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
 Frame = +1

Query: 193 VSNLLCLTRF*RYSNQLLGPIPCMLFLT*KFLESILFNLFKLYYDHE*FQLTRFQIHCYR 372
           +S L  L      +NQL+GPIP  L        S + NL  LY       +     HC R
Sbjct: 143 ISKLKQLENLILKNNQLIGPIPSTL--------SQIPNLKILYIL---IWVILTPSHC-R 190

Query: 373 DLAQNELSGEISRLLYWNIFFH*P*VRLSDLLKFSHRHSEWINI-*LTMIILISPSTLGV 549
           DLAQN+LSGEI RL+YWN           ++L++    S ++ I  L +I  +     G+
Sbjct: 191 DLAQNKLSGEIPRLIYWN-----------EVLQY--LFSMYLEIFYLVLICKLYILNRGL 237

Query: 550 EGEQPTSFLYPGMCQLTGLWYL*ITSYS 633
            G      L P MCQLTGLWY  + + S
Sbjct: 238 RGNNLEGILSPDMCQLTGLWYFDVKNNS 265


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