BLASTX nr result

ID: Rehmannia30_contig00016156 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00016156
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077678.1| methyl-CpG-binding domain-containing protein...    74   2e-12
ref|XP_011077676.1| methyl-CpG-binding domain-containing protein...    74   2e-12
ref|XP_011094058.1| methyl-CpG-binding domain-containing protein...    64   4e-09

>ref|XP_011077678.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
 ref|XP_011077679.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
 ref|XP_011077680.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
 ref|XP_011077682.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
 ref|XP_011077683.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
 ref|XP_020549622.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
 ref|XP_020549623.1| methyl-CpG-binding domain-containing protein 2 isoform X2 [Sesamum
           indicum]
          Length = 369

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 38/66 (57%), Positives = 44/66 (66%)
 Frame = -1

Query: 425 IEWVSADADTDSQLSGPGLSIGYSEPPGLKPEIQXXXXXXXXXXXXSNGDLVYNQNDVNV 246
           I WVS D DTD QLSGPGLS+ +SE PGLK E Q            SNGDLV +QN+VN+
Sbjct: 304 ITWVSPDVDTDLQLSGPGLSMNHSEDPGLKLETQSTKRKRTPSKRKSNGDLVNSQNEVNL 363

Query: 245 DESHPL 228
           +ESH L
Sbjct: 364 EESHEL 369


>ref|XP_011077676.1| methyl-CpG-binding domain-containing protein 2 isoform X1 [Sesamum
           indicum]
          Length = 403

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 38/66 (57%), Positives = 44/66 (66%)
 Frame = -1

Query: 425 IEWVSADADTDSQLSGPGLSIGYSEPPGLKPEIQXXXXXXXXXXXXSNGDLVYNQNDVNV 246
           I WVS D DTD QLSGPGLS+ +SE PGLK E Q            SNGDLV +QN+VN+
Sbjct: 338 ITWVSPDVDTDLQLSGPGLSMNHSEDPGLKLETQSTKRKRTPSKRKSNGDLVNSQNEVNL 397

Query: 245 DESHPL 228
           +ESH L
Sbjct: 398 EESHEL 403


>ref|XP_011094058.1| methyl-CpG-binding domain-containing protein 2 [Sesamum indicum]
          Length = 369

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 34/66 (51%), Positives = 38/66 (57%)
 Frame = -1

Query: 425 IEWVSADADTDSQLSGPGLSIGYSEPPGLKPEIQXXXXXXXXXXXXSNGDLVYNQNDVNV 246
           I WV  + DT+ QLSGPGLS  YSE P    EIQ            SNGDLVYN NDV +
Sbjct: 304 IAWVGPEVDTELQLSGPGLSTDYSEGPCPNLEIQSAKKKKIPSKRKSNGDLVYNHNDVKI 363

Query: 245 DESHPL 228
           +E H L
Sbjct: 364 EEPHLL 369


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