BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00015259
         (708 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37671.1| integrase [Populus trichocarpa]                        152   1e-38
gb|ABG37670.1| integrase [Populus trichocarpa]                        150   3e-38
ref|XP_011006379.1| PREDICTED: uncharacterized protein LOC105112...   145   6e-37
ref|XP_015387519.1| PREDICTED: uncharacterized protein LOC107177...   121   8e-31
gb|PON38683.1| hypothetical protein PanWU01x14_310810, partial [...   114   8e-29
ref|XP_024042762.1| uncharacterized protein LOC112099576 [Citrus...   122   3e-28
ref|XP_024043092.1| uncharacterized protein LOC112099834 [Citrus...   122   3e-28
ref|XP_024037605.1| LOW QUALITY PROTEIN: uncharacterized protein...   120   2e-27
ref|XP_024043336.1| LOW QUALITY PROTEIN: uncharacterized protein...   114   2e-25
ref|XP_024039289.1| LOW QUALITY PROTEIN: uncharacterized protein...   108   3e-23
gb|PON53295.1| Viral nucleic acid binding [Parasponia andersonii]      93   1e-20
ref|XP_018501907.1| PREDICTED: uncharacterized protein LOC103942...    99   4e-20
gb|ABG37659.1| integrase, partial [Populus trichocarpa]                99   6e-20
ref|XP_015389784.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    96   6e-19
gb|ABG37656.1| integrase [Populus trichocarpa]                         84   1e-14
ref|XP_024039259.1| uncharacterized protein LOC112097899 [Citrus...    82   4e-14
ref|XP_024041540.1| uncharacterized protein LOC112098940 [Citrus...    82   5e-14
ref|XP_015381681.1| PREDICTED: uncharacterized protein LOC102624...    80   1e-13
ref|XP_024035566.1| uncharacterized protein LOC112096369 [Citrus...    79   2e-13
ref|XP_024041924.1| uncharacterized protein LOC112099055 [Citrus...    78   1e-12

>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score =  152 bits (385), Expect = 1e-38
 Identities = 74/117 (63%), Positives = 86/117 (73%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N I KIY+AR  RLR+ MN GIPED+RW+IEAKV+L+G+ S S    +PG G        
Sbjct: 1168 NAITKIYRARCARLRLLMNHGIPEDIRWLIEAKVQLSGDSSNSFISYMPGTGKSTFAKKR 1227

Query: 534  XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTHP 704
                L+VCHKCARWTC+  CRSLGMVS NREDKIQFIKDGLSK SLDN+L T +THP
Sbjct: 1228 RAKRLKVCHKCARWTCNATCRSLGMVSINREDKIQFIKDGLSKGSLDNLLLTLETHP 1284


>gb|ABG37670.1| integrase [Populus trichocarpa]
          Length = 649

 Score =  150 bits (379), Expect = 3e-38
 Identities = 78/136 (57%), Positives = 93/136 (68%)
 Frame = +3

Query: 297 KMDKRIPPTLKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFS 476
           KMD  +   LKK F  L  N I KIY AR ERLR+ MN GIPED+RW+IEAKVRL+G+ +
Sbjct: 481 KMDTTLEK-LKKNFPALPQNAITKIYCARCERLRLLMNHGIPEDIRWLIEAKVRLSGKST 539

Query: 477 FSPTKCLPGLGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGL 656
           F+  +                  L+VCH+CARWTC+  CRSLGM+S NREDKIQFIKDGL
Sbjct: 540 FAKKR--------------RAKQLKVCHRCARWTCNATCRSLGMISVNREDKIQFIKDGL 585

Query: 657 SKESLDNILWTFDTHP 704
           SK SLDN+L T +THP
Sbjct: 586 SKGSLDNLLLTLETHP 601


>ref|XP_011006379.1| PREDICTED: uncharacterized protein LOC105112382 [Populus
           euphratica]
          Length = 561

 Score =  145 bits (367), Expect = 6e-37
 Identities = 73/122 (59%), Positives = 87/122 (71%)
 Frame = +3

Query: 339 DFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXX 518
           D +  N I KIY+AR  RLR+ MN GIPED+RW+I+AK RL+ E S S    +   G   
Sbjct: 392 DNVFKNAITKIYRARCARLRLLMNHGIPEDIRWLIKAKDRLSCESSNSFISHMSRTGKST 451

Query: 519 XXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDT 698
                    L+VCH+CARWTC+T+CRSLGMVS NREDKIQFIKDGLSKESLDN+L T +T
Sbjct: 452 FVKKHRAKRLKVCHRCARWTCNTQCRSLGMVSINREDKIQFIKDGLSKESLDNLLLTLET 511

Query: 699 HP 704
           HP
Sbjct: 512 HP 513


>ref|XP_015387519.1| PREDICTED: uncharacterized protein LOC107177719 [Citrus sinensis]
          Length = 184

 Score =  121 bits (304), Expect = 8e-31
 Identities = 67/134 (50%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
 Frame = +3

Query: 306 KRIPPTLKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSP 485
           + I   L K F  L  N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRL GEFS   
Sbjct: 2   EEIQHKLHKHFPSLPQNALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLVGEFSDPF 61

Query: 486 TKCLPGLGXXXXXXXXXXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLS 659
              +PG G            L   CH C R  C    C+SLGMVS  REDKI+F+KDG+S
Sbjct: 62  VSYMPGFGKSTFAKKRRAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMS 121

Query: 660 KESLDNILWTFDTH 701
           KE LD+IL + + H
Sbjct: 122 KELLDDILRSLEMH 135


>gb|PON38683.1| hypothetical protein PanWU01x14_310810, partial [Parasponia
           andersonii]
          Length = 104

 Score =  114 bits (284), Expect = 8e-29
 Identities = 57/100 (57%), Positives = 67/100 (67%)
 Frame = +3

Query: 405 MNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXXXXXXLQVCHKCARWTCD 584
           M   I EDVRWIIEAKVRL+GEF  S    +P               ++VCHKCARWT +
Sbjct: 1   MYMDISEDVRWIIEAKVRLSGEFLNSFVSYIPDHSKSSFVKKRRAKRMKVCHKCARWTYN 60

Query: 585 TRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTHP 704
           T+C SLG+VS NREDKI FIKDG+SK SLD+ L T +THP
Sbjct: 61  TKCHSLGIVSTNREDKINFIKDGMSKGSLDDFLSTLETHP 100


>ref|XP_024042762.1| uncharacterized protein LOC112099576 [Citrus clementina]
          Length = 1343

 Score =  122 bits (307), Expect = 3e-28
 Identities = 65/118 (55%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRLAGEFS      +PG G        
Sbjct: 1177 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFAKKR 1236

Query: 534  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                L   CH C R  C    C+SLGMVS  REDKI+F+KDG+SKESLD+IL + +TH
Sbjct: 1237 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKESLDDILRSLETH 1294


>ref|XP_024043092.1| uncharacterized protein LOC112099834 [Citrus clementina]
          Length = 1514

 Score =  122 bits (307), Expect = 3e-28
 Identities = 65/118 (55%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRLAGEFS      +PG G        
Sbjct: 1348 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFVKKR 1407

Query: 534  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                L   CH C R  C    C+SLGMVS  REDKI+F+KDG+SKESLD+IL + +TH
Sbjct: 1408 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKESLDDILRSLETH 1465


>ref|XP_024037605.1| LOW QUALITY PROTEIN: uncharacterized protein LOC112097216 [Citrus
            clementina]
          Length = 1856

 Score =  120 bits (302), Expect = 2e-27
 Identities = 64/118 (54%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRLAGEFS      +PG G        
Sbjct: 1690 NALKKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSDPFVSYMPGFGKSTFAKKR 1749

Query: 534  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                L   CH C R  C    C+SLGMVS  R+DKI+F+KDG+SKESLD+IL + +TH
Sbjct: 1750 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTRKDKIKFVKDGMSKESLDDILRSLETH 1807


>ref|XP_024043336.1| LOW QUALITY PROTEIN: uncharacterized protein LOC112100001 [Citrus
            clementina]
          Length = 1512

 Score =  114 bits (286), Expect = 2e-25
 Identities = 62/118 (52%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR ERLR+ M      D+RW+IEAKVRLAGEFS      +PG G        
Sbjct: 1346 NALRKIYKARCERLRLLMQMAFLFDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFVKKR 1405

Query: 534  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                L   CH C R  C    C+SLGMVS  REDKI+F+KDG+SKESLD+IL + +TH
Sbjct: 1406 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKESLDDILRSLETH 1463


>ref|XP_024039289.1| LOW QUALITY PROTEIN: uncharacterized protein LOC112097933 [Citrus
            clementina]
          Length = 1504

 Score =  108 bits (270), Expect = 3e-23
 Identities = 60/118 (50%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRLAGEFS      +PG G        
Sbjct: 1348 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFAKKR 1407

Query: 534  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                L   CH C R  C    C+SLGMV    +  I+F+KDG+SKESLD+IL + +TH
Sbjct: 1408 RAKRLGSKCHNCVRLGCKRPDCKSLGMVLILVKIXIKFVKDGMSKESLDDILRSLETH 1465


>gb|PON53295.1| Viral nucleic acid binding [Parasponia andersonii]
          Length = 118

 Score = 93.2 bits (230), Expect = 1e-20
 Identities = 41/70 (58%), Positives = 50/70 (71%)
 Frame = +3

Query: 495 LPGLGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLD 674
           +PG G            ++VCHKCARWTC+T+CRSLGM S NREDKI FIKDG+SK SLD
Sbjct: 1   MPGHGKSSFAKKRRAKRMKVCHKCARWTCNTKCRSLGMASTNREDKINFIKDGMSKRSLD 60

Query: 675 NILWTFDTHP 704
           ++L T + HP
Sbjct: 61  DLLSTLEMHP 70


>ref|XP_018501907.1| PREDICTED: uncharacterized protein LOC103942889 [Pyrus x
           bretschneideri]
          Length = 724

 Score = 99.4 bits (246), Expect = 4e-20
 Identities = 62/133 (46%), Positives = 74/133 (55%)
 Frame = +3

Query: 306 KRIPPTLKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSP 485
           K  P  + +RF   + N I KIY+AR  RLR+ MN GIPED+RW+IEAKVRL+ E S + 
Sbjct: 614 KYCPDQIFQRFIPDNENAITKIYRARCARLRLLMNHGIPEDIRWLIEAKVRLSDE-SSNF 672

Query: 486 TKCLPGLGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKE 665
              +PG                                 GMVS NREDKIQFIKD LSKE
Sbjct: 673 ISHMPG--------------------------------TGMVSINREDKIQFIKDDLSKE 700

Query: 666 SLDNILWTFDTHP 704
           SLDN+L T +THP
Sbjct: 701 SLDNLLLTLETHP 713


>gb|ABG37659.1| integrase, partial [Populus trichocarpa]
          Length = 612

 Score = 98.6 bits (244), Expect = 6e-20
 Identities = 48/87 (55%), Positives = 59/87 (67%)
 Frame = +3

Query: 444 EAKVRLAGEFSFSPTKCLPGLGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNR 623
           + KVRL+GE S S    +P  G            L+VCH+CA+WTC+  C SLGM+S NR
Sbjct: 478 KTKVRLSGESSNSFISYMPETGKNTFAKKRHTKRLKVCHRCAKWTCNATCCSLGMISVNR 537

Query: 624 EDKIQFIKDGLSKESLDNILWTFDTHP 704
           EDKIQFIK+GLSK SLDN+L T +THP
Sbjct: 538 EDKIQFIKNGLSKGSLDNLLLTLETHP 564


>ref|XP_015389784.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC107178737 [Citrus sinensis]
          Length = 791

 Score = 95.9 bits (237), Expect = 6e-19
 Identities = 54/114 (47%), Positives = 63/114 (55%)
 Frame = +3

Query: 324 LKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPG 503
           L  RF  L  N +  IYKAR ER+R+ M   IP ++ W+IEAKVRLAGE           
Sbjct: 456 LHNRFPSLPHNALFTIYKARSERMRLLMRNNIPANICWLIEAKVRLAGE----------- 504

Query: 504 LGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKE 665
                            CHKCAR  C+    SLGMVS NREDKIQFI+DGL+KE
Sbjct: 505 -------KRRARSIYVACHKCARMRCNKNPCSLGMVSDNREDKIQFIRDGLNKE 551


>gb|ABG37656.1| integrase [Populus trichocarpa]
          Length = 694

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 50/108 (46%), Positives = 58/108 (53%)
 Frame = +3

Query: 330 KRFDFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLG 509
           K F  L  N I K Y+A+  RLR+ MN GIPED+R +IEAK R A               
Sbjct: 518 KYFPALPPNAIAKNYRAKCARLRLLMNHGIPEDIRRLIEAKKRRAKR------------- 564

Query: 510 XXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDG 653
                       L+VCH   RWTC+  CRSLGM+  N EDKIQFIKDG
Sbjct: 565 ------------LKVCH---RWTCNATCRSLGMIFVNCEDKIQFIKDG 597


>ref|XP_024039259.1| uncharacterized protein LOC112097899 [Citrus clementina]
          Length = 779

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 49/116 (42%), Positives = 59/116 (50%)
 Frame = +3

Query: 354 NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
           N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRLA                       
Sbjct: 661 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLA----------------------- 697

Query: 534 XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                                  GMVS  REDKI+F+KDG+SKESLD+IL + +TH
Sbjct: 698 -----------------------GMVSDTREDKIKFVKDGMSKESLDDILRSLETH 730


>ref|XP_024041540.1| uncharacterized protein LOC112098940 [Citrus clementina]
          Length = 1194

 Score = 81.6 bits (200), Expect = 5e-14
 Identities = 49/116 (42%), Positives = 59/116 (50%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR ERLR+ M  GIP D+RW+IEAKVRLA                       
Sbjct: 1076 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLA----------------------- 1112

Query: 534  XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                                   GMVS  REDKI+F+KDG+SKESLD+IL + +TH
Sbjct: 1113 -----------------------GMVSDTREDKIKFVKDGMSKESLDDILRSLETH 1145


>ref|XP_015381681.1| PREDICTED: uncharacterized protein LOC102624758 [Citrus sinensis]
          Length = 927

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/111 (41%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = +3

Query: 330 KRFDFLSTNEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLG 509
           K F  L  N + KIYKAR ERLR+ M  GIP D+RW+IEAK + A               
Sbjct: 625 KHFPSLPQNALRKIYKARCERLRLLMINGIPSDIRWLIEAKKKRAKRLG----------- 673

Query: 510 XXXXXXXXXXXXLQVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLS 659
                          C  C R  C+  RC++LGMVS N EDKI+F+KDG++
Sbjct: 674 -------------SKCPHCVRLACNKPRCKTLGMVSVNCEDKIKFVKDGMT 711


>ref|XP_024035566.1| uncharacterized protein LOC112096369 [Citrus clementina]
          Length = 384

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = +3

Query: 420 PEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXXXXXXL-QVCHKCARWTC-DTRC 593
           P     +   KVRLAGEF       +PG G            L   C  C R TC + RC
Sbjct: 240 PRQEEILNRTKVRLAGEFFDPFISYMPGFGKSRFAKKRRAKRLGSECSHCVRLTCKNPRC 299

Query: 594 RSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTHP 704
           ++LGMVS N EDKI+F+KDG+SKESLD+IL + +THP
Sbjct: 300 KALGMVSVNCEDKIKFVKDGMSKESLDDILRSLETHP 336


>ref|XP_024041924.1| uncharacterized protein LOC112099055 [Citrus clementina]
          Length = 1198

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 47/116 (40%), Positives = 58/116 (50%)
 Frame = +3

Query: 354  NEILKIYKARLERLRMFMNKGIPEDVRWIIEAKVRLAGEFSFSPTKCLPGLGXXXXXXXX 533
            N + KIYKAR +RLR+ M  GIP D+RW+IEAKVRLA                       
Sbjct: 1080 NALRKIYKARCKRLRLLMINGIPSDIRWLIEAKVRLA----------------------- 1116

Query: 534  XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNILWTFDTH 701
                                   GMV   REDKI+F+KDG+SKESLD+IL + +TH
Sbjct: 1117 -----------------------GMVYDTREDKIKFVKDGMSKESLDDILRSLETH 1149