BLASTX nr result
ID: Rehmannia30_contig00014391
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00014391
(1288 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011098418.1| heterogeneous nuclear ribonucleoprotein A1-l... 379 e-126
gb|PIN01199.1| RNA-binding protein musashi/mRNA cleavage and pol... 369 e-122
ref|XP_012840693.1| PREDICTED: heterogeneous nuclear ribonucleop... 353 e-116
ref|XP_022888850.1| heterogeneous nuclear ribonucleoprotein 1 [O... 340 e-111
emb|CBI34862.3| unnamed protein product, partial [Vitis vinifera] 302 2e-97
ref|XP_009615253.1| PREDICTED: RNA-binding protein squid [Nicoti... 303 1e-96
ref|XP_019246078.1| PREDICTED: RNA-binding protein squid [Nicoti... 302 6e-96
ref|XP_009772282.1| PREDICTED: heterogeneous nuclear ribonucleop... 302 6e-96
ref|XP_022774379.1| heterogeneous nuclear ribonucleoprotein 1-li... 301 7e-96
ref|XP_024185269.1| heterogeneous nuclear ribonucleoprotein A0 i... 301 1e-95
ref|XP_016672764.1| PREDICTED: heterogeneous nuclear ribonucleop... 300 2e-95
ref|XP_012483855.1| PREDICTED: heterogeneous nuclear ribonucleop... 300 2e-95
gb|PPS20480.1| hypothetical protein GOBAR_AA00097 [Gossypium bar... 300 3e-95
ref|XP_016672614.1| PREDICTED: heterogeneous nuclear ribonucleop... 300 3e-95
ref|XP_017607733.1| PREDICTED: heterogeneous nuclear ribonucleop... 300 3e-95
ref|XP_022740412.1| heterogeneous nuclear ribonucleoprotein 1-li... 300 4e-95
ref|XP_009334135.1| PREDICTED: heterogeneous nuclear ribonucleop... 299 1e-94
gb|ESR59837.1| hypothetical protein CICLE_v10018414mg [Citrus cl... 293 1e-94
ref|XP_016649563.1| PREDICTED: heterogeneous nuclear ribonucleop... 298 1e-94
gb|PON47604.1| Splicing factor-like protein [Trema orientalis] 299 1e-94
>ref|XP_011098418.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Sesamum indicum]
Length = 380
Score = 379 bits (973), Expect = e-126
Identities = 188/226 (83%), Positives = 201/226 (88%)
Frame = -2
Query: 1104 MDEHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQF 925
MDEHQNA+E+E +PD +DV RT +VNF++ HPHTGDGASPGKIFIGGLARETTSAQF
Sbjct: 1 MDEHQNATELERLPDGDANDVDRTSPDVNFDTSHPHTGDGASPGKIFIGGLARETTSAQF 60
Query: 924 IKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIP 745
IKHFGKYGEITDSVIMKDR TGQPRGFGFVTYAD +VVDRVIEDTH+IHGKQVEIKRTIP
Sbjct: 61 IKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDRVIEDTHVIHGKQVEIKRTIP 120
Query: 744 RGANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
RGANSKDFKTKKIFVGGIPTTVGEDE RDFFSN+GEVKEQQIM+DHSSGRSRGFGF+TFE
Sbjct: 121 RGANSKDFKTKKIFVGGIPTTVGEDEFRDFFSNFGEVKEQQIMRDHSSGRSRGFGFITFE 180
Query: 564 SEQSVDDLLANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSR 427
SEQSVDDLLANGNRLDFAG QVEI PSRRQ+NSR
Sbjct: 181 SEQSVDDLLANGNRLDFAGTQVEIKKAEPKKPNLPPPPSRRQTNSR 226
>gb|PIN01199.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation factor
I complex, subunit HRP1 [Handroanthus impetiginosus]
Length = 383
Score = 369 bits (948), Expect = e-122
Identities = 185/226 (81%), Positives = 196/226 (86%)
Frame = -2
Query: 1104 MDEHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQF 925
MDEHQNASE+E +PD DV T D NF HPHTGDGASPGKIFIGGLARETTSAQF
Sbjct: 1 MDEHQNASEMEHIPDGEAGDVSGTADGENFGGSHPHTGDGASPGKIFIGGLARETTSAQF 60
Query: 924 IKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIP 745
IKHFGKYGEITDSVIMKDR TGQPRGFGF+TYADA+VVDRVIEDTH+I+GKQVEIKRTIP
Sbjct: 61 IKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADASVVDRVIEDTHVINGKQVEIKRTIP 120
Query: 744 RGANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
RGA+SKDFKTKKIFVGGIPTTVGEDE RDFFSN+GEVKEQQIM+DHSSGRSRGFGF+TFE
Sbjct: 121 RGASSKDFKTKKIFVGGIPTTVGEDEFRDFFSNFGEVKEQQIMRDHSSGRSRGFGFITFE 180
Query: 564 SEQSVDDLLANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSR 427
SEQSVDDLLANGNRL+FAG QVEI PSRRQ NSR
Sbjct: 181 SEQSVDDLLANGNRLEFAGTQVEIKKAEPKKPNLPPPPSRRQMNSR 226
>ref|XP_012840693.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog 2
[Erythranthe guttata]
gb|EYU34738.1| hypothetical protein MIMGU_mgv1a008302mg [Erythranthe guttata]
Length = 378
Score = 353 bits (905), Expect = e-116
Identities = 177/228 (77%), Positives = 190/228 (83%)
Frame = -2
Query: 1104 MDEHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQF 925
MDEHQ S+I+P NDD R+PDN+N+ES H G+ ASPGKIFIGGLARETTSAQF
Sbjct: 1 MDEHQIGSKIDPRLQEENDDDQRSPDNMNYESSRRHAGNEASPGKIFIGGLARETTSAQF 60
Query: 924 IKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIP 745
+KHFGKYGEITDSVIMKDR TGQPRGFGFVTYADAAVVDRVIEDTH HGKQVEIKRTIP
Sbjct: 61 VKHFGKYGEITDSVIMKDRNTGQPRGFGFVTYADAAVVDRVIEDTHTFHGKQVEIKRTIP 120
Query: 744 RGANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
RG SKDFKTKKIFVGG+PTTV EDE R FFSNYGEV EQQIM+DHS+GRSRGFGFVTFE
Sbjct: 121 RGGGSKDFKTKKIFVGGLPTTVDEDEFRGFFSNYGEVVEQQIMRDHSTGRSRGFGFVTFE 180
Query: 564 SEQSVDDLLANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRTP 421
S++SVDDLLANGNR+DF GAQVEI PSRRQSNSR P
Sbjct: 181 SDRSVDDLLANGNRIDFHGAQVEIKKAEPKKPSLLPPPSRRQSNSRPP 228
>ref|XP_022888850.1| heterogeneous nuclear ribonucleoprotein 1 [Olea europaea var.
sylvestris]
Length = 368
Score = 340 bits (872), Expect = e-111
Identities = 173/227 (76%), Positives = 192/227 (84%), Gaps = 1/227 (0%)
Frame = -2
Query: 1104 MDEHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQF 925
MDE NASE+ M + ++ V RTP+ NFE+ +PHTG+GASPGKIFIGGLARETTSAQF
Sbjct: 1 MDEQHNASEMNLMVNGEDNGVGRTPERTNFENSYPHTGNGASPGKIFIGGLARETTSAQF 60
Query: 924 IKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIP 745
+K+FGKYGEITDSVIMKDR+TG PRGFGFVTYAD +VVDRVIE+THII+GKQVEIKRTIP
Sbjct: 61 VKYFGKYGEITDSVIMKDRMTGHPRGFGFVTYADPSVVDRVIEETHIINGKQVEIKRTIP 120
Query: 744 RGANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
RGAN KDF+TKKIFVGGIPTTVGEDE DFFS GEVKE QIMKDHSSGRSRGFGF+TFE
Sbjct: 121 RGANIKDFRTKKIFVGGIPTTVGEDEFGDFFSKLGEVKELQIMKDHSSGRSRGFGFITFE 180
Query: 564 SEQSVDDLLANGNRLDFAGAQVEI-XXXXXXXXXXXXXPSRRQSNSR 427
+EQSVDD+LANGNRLDFAGAQVEI PS+R SNSR
Sbjct: 181 TEQSVDDILANGNRLDFAGAQVEIKKAEPKKPNPPPPPPSKRLSNSR 227
>emb|CBI34862.3| unnamed protein product, partial [Vitis vinifera]
Length = 281
Score = 302 bits (773), Expect = 2e-97
Identities = 150/199 (75%), Positives = 170/199 (85%), Gaps = 1/199 (0%)
Frame = -2
Query: 1020 NFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRITGQPRGFG 841
N PHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDR TGQPRGFG
Sbjct: 26 NDSKPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFG 85
Query: 840 FVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRGA-NSKDFKTKKIFVGGIPTTVGEDEL 664
FVTYAD +VVD+VI+DTH+I+GKQVEIKRTIP+GA +KDFKTKKIFVGGIP TV E+E
Sbjct: 86 FVTYADLSVVDQVIQDTHVINGKQVEIKRTIPKGAIGAKDFKTKKIFVGGIPATVTEEEF 145
Query: 663 RDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLLANGNRLDFAGAQVEIXXX 484
+DFF+ YGEVK+ QIM+DHS+ RSRGFGFVTF++EQ+VDDLL+ GN+L+ AGAQVEI
Sbjct: 146 KDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKA 205
Query: 483 XXXXXXXXXXPSRRQSNSR 427
PSRR S+SR
Sbjct: 206 EPKKPNPPVPPSRRYSDSR 224
>ref|XP_009615253.1| PREDICTED: RNA-binding protein squid [Nicotiana tomentosiformis]
ref|XP_016478563.1| PREDICTED: RNA-binding protein squid-like [Nicotiana tabacum]
Length = 375
Score = 303 bits (777), Expect = 1e-96
Identities = 149/204 (73%), Positives = 172/204 (84%), Gaps = 2/204 (0%)
Frame = -2
Query: 1098 EHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIK 919
E + +++ PD +NDDV + PHTGDGASPGKIFIGGLARETTSAQF+K
Sbjct: 17 EEEETNDLRTTPDHQNDDVGAS---------QPHTGDGASPGKIFIGGLARETTSAQFVK 67
Query: 918 HFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPR- 742
HFGKYGEI DSVIMKDR TGQPRGFGFVTYAD +VVDRVIE+ H+I+GKQVEIKRTIPR
Sbjct: 68 HFGKYGEIIDSVIMKDRRTGQPRGFGFVTYADPSVVDRVIEEDHVINGKQVEIKRTIPRG 127
Query: 741 -GANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
G++SKDFKTKKIFVGGIPTTV EDE +DFF +GEV E QIM+DHS+GRSRGFGF+TF+
Sbjct: 128 GGSSSKDFKTKKIFVGGIPTTVSEDEFKDFFLKFGEVNEHQIMRDHSTGRSRGFGFITFD 187
Query: 564 SEQSVDDLLANGNRLDFAGAQVEI 493
+E+SV+D+LANGNRLDFAG QVEI
Sbjct: 188 AEKSVEDILANGNRLDFAGTQVEI 211
>ref|XP_019246078.1| PREDICTED: RNA-binding protein squid [Nicotiana attenuata]
gb|OIT03731.1| heterogeneous nuclear ribonucleoprotein 1 [Nicotiana attenuata]
Length = 381
Score = 302 bits (773), Expect = 6e-96
Identities = 149/204 (73%), Positives = 171/204 (83%), Gaps = 2/204 (0%)
Frame = -2
Query: 1098 EHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIK 919
E + +++ PD +NDDV + PHTGDGASPGKIFIGGLARETTSAQF+K
Sbjct: 17 EEEETNDLSTTPDHQNDDVGAS---------QPHTGDGASPGKIFIGGLARETTSAQFVK 67
Query: 918 HFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPR- 742
HFGKYGEI DSVIMKDR TGQPRGFGFVTY D +VVD+VIE+ HII+GKQVEIKRTIPR
Sbjct: 68 HFGKYGEIIDSVIMKDRRTGQPRGFGFVTYLDPSVVDKVIEEDHIINGKQVEIKRTIPRG 127
Query: 741 -GANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
G++SKDFKTKKIFVGGIPTTV EDE +DFF +GEV E QIM+DHS+GRSRGFGF+TF+
Sbjct: 128 GGSSSKDFKTKKIFVGGIPTTVSEDEFKDFFLKFGEVNEHQIMRDHSTGRSRGFGFITFD 187
Query: 564 SEQSVDDLLANGNRLDFAGAQVEI 493
SE+SV+D+LANGNRLDFAG QVEI
Sbjct: 188 SEKSVEDILANGNRLDFAGTQVEI 211
>ref|XP_009772282.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Nicotiana
sylvestris]
ref|XP_016507040.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Nicotiana
tabacum]
Length = 381
Score = 302 bits (773), Expect = 6e-96
Identities = 149/204 (73%), Positives = 171/204 (83%), Gaps = 2/204 (0%)
Frame = -2
Query: 1098 EHQNASEIEPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIK 919
E + +++ PD +NDDV + PHTGDGASPGKIFIGGLARETTSAQF+K
Sbjct: 17 EEEETNDLRTSPDHQNDDVGAS---------QPHTGDGASPGKIFIGGLARETTSAQFVK 67
Query: 918 HFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPR- 742
HFGKYGEI DSVIMKDR TGQPRGFGFVTY D +VVD+VIE+ HII+GKQVEIKRTIPR
Sbjct: 68 HFGKYGEIIDSVIMKDRRTGQPRGFGFVTYLDPSVVDKVIEEDHIINGKQVEIKRTIPRG 127
Query: 741 -GANSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFE 565
G++SKDFKTKKIFVGGIPTTV EDE +DFF +GEV E QIM+DHS+GRSRGFGF+TF+
Sbjct: 128 GGSSSKDFKTKKIFVGGIPTTVSEDEFKDFFLKFGEVNEHQIMRDHSTGRSRGFGFITFD 187
Query: 564 SEQSVDDLLANGNRLDFAGAQVEI 493
SE+SV+D+LANGNRLDFAG QVEI
Sbjct: 188 SEKSVEDILANGNRLDFAGTQVEI 211
>ref|XP_022774379.1| heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Durio
zibethinus]
Length = 365
Score = 301 bits (771), Expect = 7e-96
Identities = 148/206 (71%), Positives = 175/206 (84%), Gaps = 1/206 (0%)
Frame = -2
Query: 1038 RTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRITG 859
R+ + + + HPHTGDGASPGKIF+GGLARET SAQF++HFGKYGEITDSVIMKDR TG
Sbjct: 18 RSSGHPDDDKSHPHTGDGASPGKIFVGGLARETNSAQFLEHFGKYGEITDSVIMKDRKTG 77
Query: 858 QPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFKTKKIFVGGIPTT 682
QPRGFGFVTYA+++VVD+VIEDTHII+GKQVEIKRTIP+G A SKDFKT+KIFVGGIP+
Sbjct: 78 QPRGFGFVTYAESSVVDKVIEDTHIINGKQVEIKRTIPKGAAGSKDFKTRKIFVGGIPSI 137
Query: 681 VGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLLANGNRLDFAGAQ 502
V EDE +DFFS YGEVKEQQIM+DH++ RSRGFGF+TFE+EQ+VDDLL GN++DFAGAQ
Sbjct: 138 VSEDEFKDFFSQYGEVKEQQIMRDHATNRSRGFGFITFETEQAVDDLLDKGNKIDFAGAQ 197
Query: 501 VEIXXXXXXXXXXXXXPSRRQSNSRT 424
VEI PS+R ++SRT
Sbjct: 198 VEIKRAEPKKPNPPPPPSKRYNDSRT 223
>ref|XP_024185269.1| heterogeneous nuclear ribonucleoprotein A0 isoform X1 [Rosa
chinensis]
gb|PRQ54035.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Rosa chinensis]
Length = 387
Score = 301 bits (771), Expect = 1e-95
Identities = 158/233 (67%), Positives = 179/233 (76%), Gaps = 7/233 (3%)
Frame = -2
Query: 1104 MDEHQNASEIE------PMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARE 943
MD H N + ++ PD R D + S PHTGDGASPGKIFIGGLARE
Sbjct: 1 MDSHTNDANLDGEAHDVDRPDHRGGGEAEDEDYKS--SSQPHTGDGASPGKIFIGGLARE 58
Query: 942 TTSAQFIKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVE 763
TT+AQF+KHFGKYGEI DSVIMKDR TGQPRGFGFVTYA+ +VVD VIE+TH+I+GKQVE
Sbjct: 59 TTTAQFVKHFGKYGEIIDSVIMKDRKTGQPRGFGFVTYANPSVVDTVIEETHVINGKQVE 118
Query: 762 IKRTIPRGA-NSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRG 586
IKRTIPRGA SKDFKTKKIFVGGIPTTV EDE DFFS +GEVKE QIM+DHS+GRSRG
Sbjct: 119 IKRTIPRGAMGSKDFKTKKIFVGGIPTTVNEDEFSDFFSQFGEVKEHQIMRDHSTGRSRG 178
Query: 585 FGFVTFESEQSVDDLLANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSR 427
FGFVTFE+EQ+VDDLL GN+L+FAGAQVEI PS+R ++SR
Sbjct: 179 FGFVTFETEQAVDDLLDKGNKLEFAGAQVEIKKAEPKKQTLPPPPSKRYNDSR 231
>ref|XP_016672764.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform X1
[Gossypium hirsutum]
Length = 371
Score = 300 bits (769), Expect = 2e-95
Identities = 148/218 (67%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Frame = -2
Query: 1074 EPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEI 895
+ +PD +D R+ D+ + + HPHTGDGASPGKIF+GGLARET+SAQF++HFGKYGEI
Sbjct: 7 DAIPDGETNDF-RSSDHPDDDKSHPHTGDGASPGKIFVGGLARETSSAQFLEHFGKYGEI 65
Query: 894 TDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFK 718
TDSVIMKDR TGQPRGFGFVTYA+ +VVD+VIEDTHII+GKQVEIKRTIP+G A SKDFK
Sbjct: 66 TDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEDTHIINGKQVEIKRTIPKGAAGSKDFK 125
Query: 717 TKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLL 538
T+KIFVGGIP+TV EDE +DFF+ YG V+E QIM+DH++ RSRGFGF+TFE+EQ+VDDLL
Sbjct: 126 TRKIFVGGIPSTVSEDEFKDFFTQYGVVREHQIMRDHATNRSRGFGFITFETEQAVDDLL 185
Query: 537 ANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRT 424
GN+++FAGAQVEI PS+R ++SRT
Sbjct: 186 EKGNKIEFAGAQVEIKRAEPKKPNPPPPPSKRYNDSRT 223
>ref|XP_012483855.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X1
[Gossypium raimondii]
gb|KJB33831.1| hypothetical protein B456_006G034100 [Gossypium raimondii]
Length = 371
Score = 300 bits (769), Expect = 2e-95
Identities = 148/218 (67%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Frame = -2
Query: 1074 EPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEI 895
+ +PD +D R+ D+ + + HPHTGDGASPGKIF+GGLARET+SAQF++HFGKYGEI
Sbjct: 7 DAIPDGETNDF-RSSDHPDDDKSHPHTGDGASPGKIFVGGLARETSSAQFLEHFGKYGEI 65
Query: 894 TDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFK 718
TDSVIMKDR TGQPRGFGFVTYA+ +VVD+VIEDTHII+GKQVEIKRTIP+G A SKDFK
Sbjct: 66 TDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEDTHIINGKQVEIKRTIPKGAAGSKDFK 125
Query: 717 TKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLL 538
T+KIFVGGIP+TV EDE +DFF+ YG V+E QIM+DH++ RSRGFGF+TFE+EQ+VDDLL
Sbjct: 126 TRKIFVGGIPSTVSEDEFKDFFTQYGVVREHQIMRDHATNRSRGFGFITFETEQAVDDLL 185
Query: 537 ANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRT 424
GN+++FAGAQVEI PS+R ++SRT
Sbjct: 186 EKGNKIEFAGAQVEIKRAEPKKPNPPPPPSKRYNDSRT 223
>gb|PPS20480.1| hypothetical protein GOBAR_AA00097 [Gossypium barbadense]
Length = 371
Score = 300 bits (767), Expect = 3e-95
Identities = 148/218 (67%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Frame = -2
Query: 1074 EPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEI 895
+ +PD +D R+ D+ + + HPHTGDGASPGKIF+GGLARET+SAQFI+HFGKYGEI
Sbjct: 7 DAIPDGETNDF-RSSDHPDDDKSHPHTGDGASPGKIFVGGLARETSSAQFIEHFGKYGEI 65
Query: 894 TDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFK 718
TDSVIMKDR TGQPRGFGFVTYA+ +VVD+VIE+THII+GKQVEIKRTIP+G A SKDFK
Sbjct: 66 TDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEETHIINGKQVEIKRTIPKGAAGSKDFK 125
Query: 717 TKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLL 538
T+KIFVGGIP+TV EDE +DFF+ YG V+E QIM+DH++ RSRGFGF+TFE+EQ+VDDLL
Sbjct: 126 TRKIFVGGIPSTVSEDEFKDFFTQYGVVREHQIMRDHATNRSRGFGFITFETEQAVDDLL 185
Query: 537 ANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRT 424
GN+++FAGAQVEI PS+R ++SRT
Sbjct: 186 EKGNKIEFAGAQVEIKRAEPKKPNPPPPPSKRYNDSRT 223
>ref|XP_016672614.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform X1
[Gossypium hirsutum]
Length = 371
Score = 300 bits (767), Expect = 3e-95
Identities = 148/218 (67%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Frame = -2
Query: 1074 EPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEI 895
+ +PD +D R+ D+ + + HPHTGDGASPGKIF+GGLARET+SAQFI+HFGKYGEI
Sbjct: 7 DAIPDGETNDF-RSSDHPDDDKSHPHTGDGASPGKIFVGGLARETSSAQFIEHFGKYGEI 65
Query: 894 TDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFK 718
TDSVIMKDR TGQPRGFGFVTYA+ +VVD+VIE+THII+GKQVEIKRTIP+G A SKDFK
Sbjct: 66 TDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEETHIINGKQVEIKRTIPKGAAGSKDFK 125
Query: 717 TKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLL 538
T+KIFVGGIP+TV EDE +DFF+ YG V+E QIM+DH++ RSRGFGF+TFE+EQ+VDDLL
Sbjct: 126 TRKIFVGGIPSTVSEDEFKDFFTQYGVVREHQIMRDHATNRSRGFGFITFETEQAVDDLL 185
Query: 537 ANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRT 424
GN+++FAGAQVEI PS+R ++SRT
Sbjct: 186 EKGNKIEFAGAQVEIKRAEPKKPNPPPPPSKRYNDSRT 223
>ref|XP_017607733.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X1
[Gossypium arboreum]
gb|KHG16529.1| Nuclear polyadenylated RNA-binding 4 [Gossypium arboreum]
Length = 371
Score = 300 bits (767), Expect = 3e-95
Identities = 148/218 (67%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Frame = -2
Query: 1074 EPMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEI 895
+ +PD +D R+ D+ + + HPHTGDGASPGKIF+GGLARET+SAQFI+HFGKYGEI
Sbjct: 7 DAIPDGETNDF-RSSDHPDDDKSHPHTGDGASPGKIFVGGLARETSSAQFIEHFGKYGEI 65
Query: 894 TDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFK 718
TDSVIMKDR TGQPRGFGFVTYA+ +VVD+VIE+THII+GKQVEIKRTIP+G A SKDFK
Sbjct: 66 TDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEETHIINGKQVEIKRTIPKGAAGSKDFK 125
Query: 717 TKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLL 538
T+KIFVGGIP+TV EDE +DFF+ YG V+E QIM+DH++ RSRGFGF+TFE+EQ+VDDLL
Sbjct: 126 TRKIFVGGIPSTVSEDEFKDFFTQYGVVREHQIMRDHATNRSRGFGFITFETEQAVDDLL 185
Query: 537 ANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRT 424
GN+++FAGAQVEI PS+R ++SRT
Sbjct: 186 EKGNKIEFAGAQVEIKRAEPKKPNPPPPPSKRYNDSRT 223
>ref|XP_022740412.1| heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Durio
zibethinus]
Length = 375
Score = 300 bits (767), Expect = 4e-95
Identities = 147/206 (71%), Positives = 175/206 (84%), Gaps = 1/206 (0%)
Frame = -2
Query: 1038 RTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRITG 859
R+ +++ + HPHTGDGASPGKIF+GGLARET SAQF++HFGKYGEITDSVIMKDR TG
Sbjct: 18 RSSNHLEDDKSHPHTGDGASPGKIFVGGLARETNSAQFLEHFGKYGEITDSVIMKDRKTG 77
Query: 858 QPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFKTKKIFVGGIPTT 682
QPRGFGFVTYA+ +VVD+VIEDTH I+GKQVEIKRTIP+G A SKDFKT+KIFVGGIP+T
Sbjct: 78 QPRGFGFVTYAEPSVVDKVIEDTHNINGKQVEIKRTIPKGAAGSKDFKTRKIFVGGIPST 137
Query: 681 VGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLLANGNRLDFAGAQ 502
V EDE +DFFS +GEVKE QIM+DH++ RSRGFGF+TFE+EQ+VDDLLA GN++DFAGAQ
Sbjct: 138 VSEDEFKDFFSQHGEVKEYQIMRDHATNRSRGFGFITFETEQAVDDLLAKGNKIDFAGAQ 197
Query: 501 VEIXXXXXXXXXXXXXPSRRQSNSRT 424
VEI PS+R ++SRT
Sbjct: 198 VEIKRAEPKKPNPPPPPSKRYNDSRT 223
>ref|XP_009334135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform X1
[Pyrus x bretschneideri]
Length = 384
Score = 299 bits (765), Expect = 1e-94
Identities = 155/233 (66%), Positives = 180/233 (77%), Gaps = 7/233 (3%)
Frame = -2
Query: 1104 MDEHQNASEIEPM------PDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARE 943
MD H N ++ PD R++ ++ ++ PHTGDGASPGKIFIGGLARE
Sbjct: 1 MDSHTNDPNLDGEAHDINGPDHRHEPA----EDDDYSRSQPHTGDGASPGKIFIGGLARE 56
Query: 942 TTSAQFIKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVE 763
TT+AQFIKHFG YGEI DSVIMKDR TGQPRGFGFVTYAD +VVD+VIED H+I+GKQVE
Sbjct: 57 TTTAQFIKHFGAYGEIIDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDAHVINGKQVE 116
Query: 762 IKRTIPRGA-NSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRG 586
IKRTIPRGA SKDFKTKKIFVGGIPTTV E+E DFFS YGEVKE QIM+DHS+GRSRG
Sbjct: 117 IKRTIPRGAMGSKDFKTKKIFVGGIPTTVNEEEFSDFFSQYGEVKEHQIMRDHSTGRSRG 176
Query: 585 FGFVTFESEQSVDDLLANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSR 427
FGFVTF++EQ+VD+LL GN+L+FAGAQVEI PS+R ++SR
Sbjct: 177 FGFVTFDTEQAVDELLDKGNKLEFAGAQVEIKKAEPKKPNQPAPPSKRYNDSR 229
>gb|ESR59837.1| hypothetical protein CICLE_v10018414mg [Citrus clementina]
Length = 217
Score = 293 bits (749), Expect = 1e-94
Identities = 148/204 (72%), Positives = 173/204 (84%), Gaps = 2/204 (0%)
Frame = -2
Query: 1104 MDEHQNASEIEPMPDRRNDDVPRTPDN-VNFESPHPHTGDGASPGKIFIGGLARETTSAQ 928
MD N E + DR ++DV ++ D+ + PHTGDGASPGKIFIGGLARET+SAQ
Sbjct: 1 MDPESN----EGIVDRDSNDVHKSSDHHPEDDRSQPHTGDGASPGKIFIGGLARETSSAQ 56
Query: 927 FIKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTI 748
FIKHFGKYGEITDSVIMKDR TGQPRGFGFVTYAD +VVD+VIEDTHII+GKQVEIKRTI
Sbjct: 57 FIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTI 116
Query: 747 PRGA-NSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVT 571
P+GA SKDFKTKKIFVGGIP++V EDE +DFF +GEV+E QIM+DHS+ RSRGFGF+T
Sbjct: 117 PKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFIT 176
Query: 570 FESEQSVDDLLANGNRLDFAGAQV 499
F++EQ+VDDLLA GN+L+ AGAQV
Sbjct: 177 FDTEQAVDDLLAKGNKLELAGAQV 200
>ref|XP_016649563.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Prunus mume]
Length = 381
Score = 298 bits (764), Expect = 1e-94
Identities = 155/228 (67%), Positives = 181/228 (79%), Gaps = 2/228 (0%)
Frame = -2
Query: 1104 MDEHQNASEIE-PMPDRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQ 928
MD N + ++ D D ++ +++S PHTGDGASPGKIFIGGLARETT+AQ
Sbjct: 1 MDSQTNDANLDGEAHDINRSDHRDEAEDEDYKS-QPHTGDGASPGKIFIGGLARETTTAQ 59
Query: 927 FIKHFGKYGEITDSVIMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTI 748
FIKHFGKYGEI DSVIMKDR TGQPRGFGFVTYAD +VVD+VI++TH+I+GKQVEIKRTI
Sbjct: 60 FIKHFGKYGEIIDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIDETHVINGKQVEIKRTI 119
Query: 747 PRGA-NSKDFKTKKIFVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVT 571
PRGA SKDFKTKKIFVGGIPTTV EDE DFFS +GEVKE QIM+DHS+GRSRGFGF+T
Sbjct: 120 PRGAMGSKDFKTKKIFVGGIPTTVNEDEFSDFFSQFGEVKEHQIMRDHSTGRSRGFGFIT 179
Query: 570 FESEQSVDDLLANGNRLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSR 427
F++EQSVD+LL GN+L+FAGAQVEI PS+R S+SR
Sbjct: 180 FDTEQSVDELLDKGNKLEFAGAQVEIKKAEPKKPNLPAAPSKRYSDSR 227
>gb|PON47604.1| Splicing factor-like protein [Trema orientalis]
Length = 393
Score = 299 bits (765), Expect = 1e-94
Identities = 153/214 (71%), Positives = 177/214 (82%), Gaps = 1/214 (0%)
Frame = -2
Query: 1062 DRRNDDVPRTPDNVNFESPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSV 883
DRR++D + +++S PHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEI DSV
Sbjct: 21 DRRDED-----EEEDYKS-QPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEIIDSV 74
Query: 882 IMKDRITGQPRGFGFVTYADAAVVDRVIEDTHIIHGKQVEIKRTIPRG-ANSKDFKTKKI 706
IMKDR TGQPRGFGFVTYAD +VVD+VI+D+H+I+GKQVEIKRTIPRG A SKDFKTKKI
Sbjct: 75 IMKDRKTGQPRGFGFVTYADPSVVDKVIQDSHVINGKQVEIKRTIPRGAAGSKDFKTKKI 134
Query: 705 FVGGIPTTVGEDELRDFFSNYGEVKEQQIMKDHSSGRSRGFGFVTFESEQSVDDLLANGN 526
FVGGIPTTV EDE RDFFS +GEVKE QIM+DH++ RSRGFGF+TFE+EQ+VDDLLA GN
Sbjct: 135 FVGGIPTTVNEDEFRDFFSQFGEVKEHQIMRDHATSRSRGFGFITFETEQAVDDLLAKGN 194
Query: 525 RLDFAGAQVEIXXXXXXXXXXXXXPSRRQSNSRT 424
+L+ AGAQVEI PS+R + R+
Sbjct: 195 KLEMAGAQVEIKKAEPKKPNPPPAPSKRYNEPRS 228