BLASTX nr result
ID: Rehmannia30_contig00014200
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00014200
(510 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN00171.1| Protein required for 18S rRNA maturation and 40S ... 238 4e-76
ref|XP_011078971.1| ribosomal RNA small subunit methyltransferas... 228 2e-72
ref|XP_022882702.1| ribosomal RNA small subunit methyltransferas... 223 2e-70
ref|XP_022893796.1| ribosomal RNA small subunit methyltransferas... 217 6e-68
gb|KZV52612.1| hypothetical protein F511_07005 [Dorcoceras hygro... 207 1e-65
ref|XP_012827928.1| PREDICTED: ribosomal RNA small subunit methy... 209 1e-64
ref|XP_004251974.1| PREDICTED: ribosomal RNA small subunit methy... 206 1e-63
gb|PHU09467.1| Ribosomal RNA small subunit methyltransferase NEP... 204 6e-63
gb|PHT74613.1| Ribosomal RNA small subunit methyltransferase NEP... 204 6e-63
gb|PHT40509.1| Ribosomal RNA small subunit methyltransferase NEP... 204 6e-63
ref|XP_015061820.1| PREDICTED: ribosomal RNA small subunit methy... 204 8e-63
ref|XP_006356609.1| PREDICTED: ribosomal RNA small subunit methy... 203 1e-62
ref|XP_019248174.1| PREDICTED: ribosomal RNA small subunit methy... 201 1e-61
ref|XP_009763268.1| PREDICTED: ribosomal RNA small subunit methy... 201 1e-61
gb|EPS65225.1| hypothetical protein M569_09552, partial [Genlise... 200 2e-61
gb|PHT35665.1| hypothetical protein CQW23_23365, partial [Capsic... 197 4e-61
ref|XP_009586732.1| PREDICTED: ribosomal RNA small subunit methy... 199 5e-61
ref|XP_019188123.1| PREDICTED: ribosomal RNA small subunit methy... 199 5e-61
ref|XP_009586730.1| PREDICTED: ribosomal RNA small subunit methy... 194 2e-60
ref|XP_019252217.1| PREDICTED: ribosomal RNA small subunit methy... 196 8e-60
>gb|PIN00171.1| Protein required for 18S rRNA maturation and 40S ribosome
biogenesis [Handroanthus impetiginosus]
Length = 281
Score = 238 bits (606), Expect = 4e-76
Identities = 116/120 (96%), Positives = 119/120 (99%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY
Sbjct: 162 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 221
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
NYVG +NNELDLVFVVGAMAHGKID+DYVEDY+SISEYPMSAAYCISIITTAVERKWKIL
Sbjct: 222 NYVGTINNELDLVFVVGAMAHGKIDQDYVEDYISISEYPMSAAYCISIITTAVERKWKIL 281
>ref|XP_011078971.1| ribosomal RNA small subunit methyltransferase NEP1 [Sesamum
indicum]
Length = 282
Score = 228 bits (582), Expect = 2e-72
Identities = 111/120 (92%), Positives = 118/120 (98%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPIN RKIGFSHSSEKLVDMY
Sbjct: 163 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINSRKIGFSHSSEKLVDMY 222
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
NYVG +NN+LDLVFVVGAM+HGKI+++YVEDY+SISEYPMSAAYCISIITTAVERKWKIL
Sbjct: 223 NYVGTINNDLDLVFVVGAMSHGKIEDEYVEDYISISEYPMSAAYCISIITTAVERKWKIL 282
>ref|XP_022882702.1| ribosomal RNA small subunit methyltransferase NEP1-like [Olea
europaea var. sylvestris]
ref|XP_022882703.1| ribosomal RNA small subunit methyltransferase NEP1-like [Olea
europaea var. sylvestris]
ref|XP_022882704.1| ribosomal RNA small subunit methyltransferase NEP1-like [Olea
europaea var. sylvestris]
ref|XP_022882705.1| ribosomal RNA small subunit methyltransferase NEP1-like [Olea
europaea var. sylvestris]
Length = 279
Score = 223 bits (569), Expect = 2e-70
Identities = 110/120 (91%), Positives = 116/120 (96%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPIN RKIGFSHSSEKLVDMY
Sbjct: 160 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINSRKIGFSHSSEKLVDMY 219
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YVG + ++DLVFVVGAMAHGKID+DYVEDYLSISE+PMSAAYCISIITTAVERKWKIL
Sbjct: 220 DYVGTLERDMDLVFVVGAMAHGKIDKDYVEDYLSISEFPMSAAYCISIITTAVERKWKIL 279
>ref|XP_022893796.1| ribosomal RNA small subunit methyltransferase NEP1-like [Olea
europaea var. sylvestris]
Length = 282
Score = 217 bits (552), Expect = 6e-68
Identities = 108/120 (90%), Positives = 114/120 (95%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPIN RKIGFSHSSEKLVDMY
Sbjct: 163 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINSRKIGFSHSSEKLVDMY 222
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV V+N +DLVFVVGAMAHGKID+DYVEDYL ISE+PMSAAYCISIITTAVE +WKIL
Sbjct: 223 DYVSTVDNGMDLVFVVGAMAHGKIDKDYVEDYLLISEFPMSAAYCISIITTAVELQWKIL 282
>gb|KZV52612.1| hypothetical protein F511_07005 [Dorcoceras hygrometricum]
Length = 183
Score = 207 bits (528), Expect = 1e-65
Identities = 101/120 (84%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLLQKLHITA+GKGEKLLRVIKNPVTQYLPI RKIGFSHSSEKLV M+
Sbjct: 64 RTYKRFSGLMVQLLQKLHITASGKGEKLLRVIKNPVTQYLPIKSRKIGFSHSSEKLVKMH 123
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YVG VN+ELDLVFVVGAMAHGKID+DYVEDY+SIS +P+SA YC+SIIT A+E+KW IL
Sbjct: 124 DYVGTVNSELDLVFVVGAMAHGKIDKDYVEDYVSISSFPLSAVYCLSIITNALEQKWDIL 183
>ref|XP_012827928.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
[Erythranthe guttata]
gb|EYU18830.1| hypothetical protein MIMGU_mgv1a011236mg [Erythranthe guttata]
Length = 288
Score = 209 bits (531), Expect = 1e-64
Identities = 101/120 (84%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLL L I A+GKGEKLLRVIKNPVT+YLP+N RKIGFSHSSEKL DMY
Sbjct: 169 RTYKRFSGLMVQLLNDLDIKASGKGEKLLRVIKNPVTKYLPVNSRKIGFSHSSEKLTDMY 228
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
NYV VN++LDLVFVVGAMAHGKI+++YVEDY+SISEYP+SAAYCISI+TTAVERKWKIL
Sbjct: 229 NYVDTVNDDLDLVFVVGAMAHGKIEDNYVEDYISISEYPLSAAYCISIVTTAVERKWKIL 288
>ref|XP_004251974.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Solanum lycopersicum]
Length = 278
Score = 206 bits (523), Expect = 1e-63
Identities = 99/120 (82%), Positives = 113/120 (94%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRFSG+M+QLLQKL ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 159 RTFKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQ 218
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+++LVFVVGAMAHGKID+DYVEDYLSIS+YP+SAAYCIS+IT A+ERKWKIL
Sbjct: 219 DYVNGVNNDMNLVFVVGAMAHGKIDKDYVEDYLSISDYPLSAAYCISMITNAMERKWKIL 278
>gb|PHU09467.1| Ribosomal RNA small subunit methyltransferase NEP1 [Capsicum
chinense]
Length = 279
Score = 204 bits (519), Expect = 6e-63
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 160 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQ 219
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+ +LVFVVGAMAHGKID+DYVEDYLS+S+YP+SAAYCIS+IT AVERKWKIL
Sbjct: 220 DYVNGVNNDTNLVFVVGAMAHGKIDKDYVEDYLSVSDYPLSAAYCISMITNAVERKWKIL 279
>gb|PHT74613.1| Ribosomal RNA small subunit methyltransferase NEP1 [Capsicum
annuum]
Length = 279
Score = 204 bits (519), Expect = 6e-63
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 160 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQ 219
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+ +LVFVVGAMAHGKID+DYVEDYLS+S+YP+SAAYCIS+IT AVERKWKIL
Sbjct: 220 DYVNGVNNDTNLVFVVGAMAHGKIDKDYVEDYLSVSDYPLSAAYCISMITNAVERKWKIL 279
>gb|PHT40509.1| Ribosomal RNA small subunit methyltransferase NEP1 [Capsicum
baccatum]
Length = 279
Score = 204 bits (519), Expect = 6e-63
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 160 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQ 219
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+ +LVFVVGAMAHGKID+DYVEDYLS+S+YP+SAAYCIS+IT AVERKWKIL
Sbjct: 220 DYVNGVNNDTNLVFVVGAMAHGKIDKDYVEDYLSVSDYPLSAAYCISMITNAVERKWKIL 279
>ref|XP_015061820.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Solanum pennellii]
Length = 278
Score = 204 bits (518), Expect = 8e-63
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRFSG+M+QLLQKL ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 159 RTFKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQ 218
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+++LVFVVGAMAHGKID+DYVEDYLSIS+YP+SAAYCIS+IT A+ERKW IL
Sbjct: 219 DYVNGVNNDMNLVFVVGAMAHGKIDKDYVEDYLSISDYPLSAAYCISMITNAMERKWNIL 278
>ref|XP_006356609.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Solanum tuberosum]
Length = 278
Score = 203 bits (517), Expect = 1e-62
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 159 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQ 218
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+ +LVFVVGAMAHGKID+DYVEDYLSIS+YP+SAAYCIS+IT A+ERKWKIL
Sbjct: 219 DYVNGVNNDTNLVFVVGAMAHGKIDKDYVEDYLSISDYPLSAAYCISMITNAMERKWKIL 278
>ref|XP_019248174.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana attenuata]
ref|XP_019248175.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana attenuata]
gb|OIT02837.1| hypothetical protein A4A49_01890 [Nicotiana attenuata]
Length = 276
Score = 201 bits (510), Expect = 1e-61
Identities = 93/120 (77%), Positives = 113/120 (94%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPV+QYLPI+CRKIGFSHSSEKLVD+
Sbjct: 157 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVSQYLPIDCRKIGFSHSSEKLVDIQ 216
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV +NN+++LVFVVGAMAHGKI++DYVEDY+S+S+YP+SAAYCIS++T AVERKWKIL
Sbjct: 217 DYVNGINNDMNLVFVVGAMAHGKIEKDYVEDYISVSDYPLSAAYCISMVTNAVERKWKIL 276
>ref|XP_009763268.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana sylvestris]
ref|XP_016442157.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana tabacum]
Length = 276
Score = 201 bits (510), Expect = 1e-61
Identities = 94/120 (78%), Positives = 112/120 (93%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPV+QYLPI+CRKIGFSHSSEKLVD+
Sbjct: 157 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVSQYLPIDCRKIGFSHSSEKLVDIQ 216
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV +NNE +LVFVVGAMAHGKI++DYVEDY+S+S+YP+SAAYCIS++T AVERKWKIL
Sbjct: 217 DYVNGINNETNLVFVVGAMAHGKIEKDYVEDYISVSDYPLSAAYCISMVTNAVERKWKIL 276
>gb|EPS65225.1| hypothetical protein M569_09552, partial [Genlisea aurea]
Length = 280
Score = 200 bits (509), Expect = 2e-61
Identities = 98/120 (81%), Positives = 110/120 (91%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RTYKRFSGLMVQLLQKLHITAAGKGEKL RVIK+PV QYLP NCRKIG SHSS KLVDMY
Sbjct: 161 RTYKRFSGLMVQLLQKLHITAAGKGEKLCRVIKSPVDQYLPANCRKIGLSHSSGKLVDMY 220
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
++VG ++NE DLVFVVGAMAHGKIDE VE+++SISEYP+SAAYC+SIITTA+E+K KIL
Sbjct: 221 SFVGTISNESDLVFVVGAMAHGKIDEKQVEEFISISEYPLSAAYCVSIITTALEKKLKIL 280
>gb|PHT35665.1| hypothetical protein CQW23_23365, partial [Capsicum baccatum]
Length = 217
Score = 197 bits (501), Expect = 4e-61
Identities = 95/120 (79%), Positives = 109/120 (90%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVI+NPVTQYLPI+CRKIGFSHSSEKLVD+
Sbjct: 98 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVIRNPVTQYLPIDCRKIGFSHSSEKLVDIQ 157
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV VNN+ +LV+VVGAM HG ID+DYVEDYLSIS YP+SAAYCIS+IT AVERKWKIL
Sbjct: 158 DYVNGVNNDTNLVYVVGAMTHGNIDKDYVEDYLSISYYPLSAAYCISMITNAVERKWKIL 217
>ref|XP_009586732.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana tomentosiformis]
Length = 276
Score = 199 bits (506), Expect = 5e-61
Identities = 95/120 (79%), Positives = 111/120 (92%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRVIKNPV++YLPI+CRKIGFSHSSEKLVD+
Sbjct: 157 RTFKRFAGVMLQLLQKLSITAVGKREKLLRVIKNPVSKYLPIDCRKIGFSHSSEKLVDIQ 216
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
YV +N +++LVFVVGAMAHGKID+DYVEDYLSIS+YP+SAAYCIS+IT AVERKWKIL
Sbjct: 217 EYVNGINKDMNLVFVVGAMAHGKIDKDYVEDYLSISDYPLSAAYCISMITNAVERKWKIL 276
>ref|XP_019188123.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Ipomoea nil]
ref|XP_019188124.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Ipomoea nil]
ref|XP_019188126.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Ipomoea nil]
ref|XP_019188127.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
[Ipomoea nil]
Length = 279
Score = 199 bits (506), Expect = 5e-61
Identities = 94/120 (78%), Positives = 114/120 (95%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRFSG+M+QLLQKL+ITA GK EKLLRVIKNPVTQYLPI+CRKIGFSHSSEKLVD++
Sbjct: 160 RTFKRFSGIMLQLLQKLNITAVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIH 219
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
+YV V+++++LVFVVGAMAHGKID+DYVEDY+SIS+YP+SAAYCIS+IT A+E KWK+L
Sbjct: 220 DYVANVDSDMNLVFVVGAMAHGKIDKDYVEDYISISDYPLSAAYCISMITNALEHKWKML 279
>ref|XP_009586730.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana tomentosiformis]
Length = 182
Score = 194 bits (493), Expect = 2e-60
Identities = 92/120 (76%), Positives = 110/120 (91%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
R++KRF+G+M+QLLQK ITA GK EKLLRVI+NPV++YLPI+CRKIGFSHSSEKLVD+
Sbjct: 63 RSFKRFAGIMLQLLQKWSITAVGKREKLLRVIENPVSKYLPIDCRKIGFSHSSEKLVDIQ 122
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
YV +N +++LVFVVGAMAHGKID+DYVEDYLSIS+YP+SAAYCIS+IT AVERKWKIL
Sbjct: 123 EYVNGINKDMNLVFVVGAMAHGKIDKDYVEDYLSISDYPLSAAYCISMITNAVERKWKIL 182
>ref|XP_019252217.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Nicotiana attenuata]
Length = 277
Score = 196 bits (498), Expect = 8e-60
Identities = 94/120 (78%), Positives = 109/120 (90%)
Frame = +3
Query: 3 RTYKRFSGLMVQLLQKLHITAAGKGEKLLRVIKNPVTQYLPINCRKIGFSHSSEKLVDMY 182
RT+KRF+G+M+QLLQKL ITA GK EKLLRV +NPV+QYLPI+CRKIGFSHSSEKLVD+
Sbjct: 158 RTFKRFAGIMLQLLQKLSITAVGKREKLLRVRENPVSQYLPIDCRKIGFSHSSEKLVDVQ 217
Query: 183 NYVGAVNNELDLVFVVGAMAHGKIDEDYVEDYLSISEYPMSAAYCISIITTAVERKWKIL 362
YV +N +++LVFVVGAMAHGKID DYVEDYLSIS+YP+SAAYCIS+IT AVERKWKIL
Sbjct: 218 EYVNGINKDMNLVFVVGAMAHGKIDTDYVEDYLSISDYPLSAAYCISMITNAVERKWKIL 277
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Mar 24, 2018 3:07 PM
Number of letters in database: 54,822,741,787
Number of sequences in database: 149,584,005
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 149584005
Number of Hits to DB: 645,368,825,169,149
Number of extensions: 1621677022
Number of successful extensions: 1976384790
Number of sequences better than 1.0e-05: 137974312
Number of HSP's gapped: 1428521228
Number of HSP's successfully gapped: 196300570
Length of database: 54,822,741,787
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)