BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00012370
         (523 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIM98980.1| U1 snRNP-specific protein C [Handroanthus impetig...    60   6e-08
ref|XP_011082507.1| U1 small nuclear ribonucleoprotein C [Sesamu...    56   2e-06

>gb|PIM98980.1| U1 snRNP-specific protein C [Handroanthus impetiginosus]
          Length = 192

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   GGPPMFAPAMYQGNVSSLPTSGGSDGSNINAQAPEA 110
           G PPMFAP MYQG+ + LPTSGGSDG NINAQAPEA
Sbjct: 156 GAPPMFAPPMYQGS-APLPTSGGSDGVNINAQAPEA 190


>ref|XP_011082507.1| U1 small nuclear ribonucleoprotein C [Sesamum indicum]
          Length = 194

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   GGPPMFAPAMYQGNVSSLPTSGGSDGSNINAQAPEA 110
           G PPMFAP +YQG+VS LP+SGG DG+N +AQAPEA
Sbjct: 158 GAPPMFAPPVYQGSVS-LPSSGGGDGTNASAQAPEA 192