BLASTX nr result

ID: Rehmannia30_contig00011928 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00011928
         (957 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    47   4e-09
ref|XP_012856930.1| PREDICTED: uncharacterized protein LOC105976...    35   5e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 46.6 bits (109), Expect(3) = 4e-09
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = -1

Query: 375 IYVIKDFLVTKETDKYKATATKHKILFYGKTHVFEMFEQSFPRFL 241
           ++ IK+ +V +   KYK T +K+KI F  KTHV E+F+ SFP  +
Sbjct: 59  LFAIKNIIVAENRMKYKTTTSKYKINFITKTHVCEIFDDSFPSIM 103



 Score = 32.0 bits (71), Expect(3) = 4e-09
 Identities = 11/26 (42%), Positives = 21/26 (80%)
 Frame = -3

Query: 448 QGDRIHATIRKFQIANFKNLLKEGHI 371
           +GDRIHA+++K  +   +++LK+GH+
Sbjct: 34  EGDRIHASVKKPVLDKVRHILKDGHL 59



 Score = 31.2 bits (69), Expect(3) = 4e-09
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 623 WVVKLRLIRLFEKPSFTDMNQIMSLEGIFHD 531
           W +KLRL+R +E P++ + +   +LE +FHD
Sbjct: 3   WALKLRLVRCYELPAY-EKSGDFTLECVFHD 32


>ref|XP_012856930.1| PREDICTED: uncharacterized protein LOC105976187 [Erythranthe
           guttata]
          Length = 171

 Score = 35.4 bits (80), Expect(3) = 5e-06
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = -3

Query: 448 QGDRIHATIRKFQIANFKNLLKEGH 374
           QG +IHA+I+K Q+ NF N++KEG+
Sbjct: 50  QGGKIHASIKKTQVNNFYNIVKEGN 74



 Score = 32.0 bits (71), Expect(3) = 5e-06
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 372 YVIKDFLVTKETDKYKATATKHKILFYGKTHVFEMFEQSFP 250
           YV ++ LV     KY+AT   HKI+F   T V     ++ P
Sbjct: 76  YVFQNILVVPNDGKYRATRNAHKIIFIKTTRVTNCKVENIP 116



 Score = 31.6 bits (70), Expect(3) = 5e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -2

Query: 674 MAPFITLVRNLNDSQTLWVVKLRLIRLFEKPSFTDMNQIMSLEGIFHD 531
           MAP +T   ++   +  W V  R+IRL++ PS  D   I S++ I  D
Sbjct: 1   MAPQVTCFNDITPDRFNWKVVARVIRLWKVPSKIDQTIINSIDMILVD 48


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