BLASTX nr result

ID: Rehmannia30_contig00011700 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00011700
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016497532.1| PREDICTED: serine/arginine-rich splicing fac...    66   5e-10

>ref|XP_016497532.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform
           X2 [Nicotiana tabacum]
          Length = 193

 Score = 65.9 bits (159), Expect = 5e-10
 Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 10/68 (14%)
 Frame = -2

Query: 531 RYITVERKILRQLCWQKSKMISPSIATS*N----------SFSLASDQLNSIYIAQQLYN 382
           RYITVE+K L QLCWQ+SKMIS S+AT  +           F+  S   +S YIAQQLYN
Sbjct: 126 RYITVEKKTLPQLCWQQSKMISSSLATLYSLSLINGPLKQLFTCISSAKHSNYIAQQLYN 185

Query: 381 LSKYSQLS 358
           LSKY QL+
Sbjct: 186 LSKYFQLN 193


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