BLASTX nr result

ID: Rehmannia30_contig00011695 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00011695
         (467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088064.1| protein RETICULATA-RELATED 4, chloroplastic ...    79   3e-14

>ref|XP_011088064.1| protein RETICULATA-RELATED 4, chloroplastic [Sesamum indicum]
          Length = 387

 Score = 79.0 bits (193), Expect = 3e-14
 Identities = 42/67 (62%), Positives = 42/67 (62%)
 Frame = -3

Query: 312 MATATFSHLKIQSTVSSTXXXXXXXXXXASLTYQLSTTHFCKTSLSSTSFPRLGSLHSPR 133
           MATA FSHL  Q TVS T           SL Y    THFCK SLS TS P LGSLHSPR
Sbjct: 1   MATAAFSHLTAQFTVSPTGHHRSSYQNPTSLNYPFLATHFCKASLSCTSSPILGSLHSPR 60

Query: 132 RPSFITF 112
           RPSFITF
Sbjct: 61  RPSFITF 67


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