BLASTX nr result

ID: Rehmannia30_contig00010926 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00010926
         (430 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus im...    88   7e-20
gb|PIN08233.1| hypothetical protein CDL12_19190 [Handroanthus im...    64   3e-10

>gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus impetiginosus]
          Length = 107

 Score = 88.2 bits (217), Expect = 7e-20
 Identities = 52/92 (56%), Positives = 61/92 (66%)
 Frame = -2

Query: 414 MKHVIWLIAVIPFLSHFPFPTTAYERISKSSNEIRSPFMEQGEQTLDCKQPYCFLNSREM 235
           MK+V   +  +   SHFPFPT A E I K SN+ +S  +EQG+QTLD  QP    NS+EM
Sbjct: 1   MKYVSLCLMALLLFSHFPFPTLARENIPKLSNKTKSHTLEQGKQTLDRDQPR-LTNSQEM 59

Query: 234 VVQIKQRARTVPRAIPGGTGGRTRSSAVRGNT 139
           VVQIK+RA    R IPGGT  RTRSSAVR  T
Sbjct: 60  VVQIKKRA----RMIPGGTRARTRSSAVREQT 87


>gb|PIN08233.1| hypothetical protein CDL12_19190 [Handroanthus impetiginosus]
          Length = 123

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -2

Query: 423 MAQMKHVIWLIAVIPFLSH-FPFPTTAYERISKSSNEIRSPFMEQGEQTLDCKQPYCFLN 247
           M + KH+  L+ +  FL   F   T+AY+ I    NE  SP ++Q +QTL+   P C ++
Sbjct: 16  MTERKHIQSLMIITLFLLPVFSLTTSAYQSIF---NESPSPSLQQEKQTLNITHPCCMMS 72

Query: 246 SREMVVQIKQRARTVPRAIPGGTGGRTRSSA 154
           S+++  QIK+R R +P  +PGGT  RTRSSA
Sbjct: 73  SQKLGFQIKRRGRIIP--VPGGTRARTRSSA 101


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