BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00010165
         (1258 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX86534.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   238   2e-69
gb|KYP49651.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]   213   3e-64
gb|PNY17337.1| retrotransposon-related protein [Trifolium pratense]   223   6e-64
gb|OMO55084.1| reverse transcriptase [Corchorus capsularis]           228   3e-62
ref|XP_010646171.1| PREDICTED: uncharacterized protein LOC104878...   224   3e-62
gb|PNX81390.1| transposon Tf2-1 polyprotein, partial [Trifolium ...   215   6e-62
gb|KYP37665.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   215   2e-61
gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   201   9e-60
ref|XP_010655166.1| PREDICTED: uncharacterized protein LOC104880...   220   1e-59
dbj|GAU10375.1| hypothetical protein TSUD_419040, partial [Trifo...   202   1e-59
gb|KYP45652.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]   205   2e-59
gb|KYP53324.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]   205   2e-59
gb|PRQ23185.1| putative nucleotidyltransferase, Ribonuclease H [...   204   3e-59
gb|PNX93203.1| hypothetical protein L195_g016354 [Trifolium prat...   211   3e-59
gb|PKA64490.1| putative mitochondrial protein [Apostasia shenzhe...   211   1e-58
ref|XP_006598537.1| PREDICTED: uncharacterized protein LOC100793...   207   2e-58
gb|PNX89231.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   204   5e-58
gb|KYP46454.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   196   6e-58
gb|OMO55704.1| reverse transcriptase [Corchorus capsularis]           215   7e-58
gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   203   8e-58

>gb|PNX86534.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 544

 Score =  238 bits (607), Expect = 2e-69
 Identities = 110/184 (59%), Positives = 142/184 (77%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            VNR LEQYLR FTQ QP  W+ LL WAE+ YNT+YHSS +M+PFQALYGR PP +P Y  
Sbjct: 269  VNRGLEQYLRAFTQQQPSSWLLLLPWAEFHYNTSYHSSLKMSPFQALYGRKPPTVPGYTR 328

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
               ++Q +DE L NR ELLR LK NL++AQNRM+Q+AN HRR+  F VGD VLV+LQPYR
Sbjct: 329  GSTSIQTLDEALTNRDELLRQLKQNLLEAQNRMIQKANAHRRDFSFAVGDLVLVRLQPYR 388

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SV +  + KL++RYYGP++V++++G VAY+L LP ES+IHPVFH+++LKPF+G     
Sbjct: 389  QSSVRQHKHHKLSKRYYGPYRVIERIGPVAYKLQLPSESRIHPVFHIAVLKPFRGSNNPP 448

Query: 718  VSTL 707
            +S L
Sbjct: 449  LSDL 452



 Score = 63.5 bits (153), Expect = 4e-07
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = -3

Query: 743 FQRRSN*NRVDAAKESFLNQPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWED 564
           F+  +N    D   ES  NQPV QP  I   R IL       QVL+QW  + P+EASWED
Sbjct: 441 FRGSNNPPLSDLPSESLNNQPVDQPSAILERRTILIHGVPREQVLIQWKGAPPDEASWED 500

Query: 563 RNLMGSWITETNLEDKVNFQGRESDT 486
            +++ +     +LEDKV  +G  SDT
Sbjct: 501 VDIITACYPNFHLEDKVILEGEGSDT 526


>gb|KYP49651.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 828

 Score =  213 bits (543), Expect(2) = 3e-64
 Identities = 100/180 (55%), Positives = 130/180 (72%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+CLE YLRCF+   PK W+KLL WAEY YNT++H S  MTPFQA+YGR+PP I  Y P
Sbjct: 500  LNKCLEMYLRCFSSQNPKDWVKLLPWAEYWYNTSFHHSLGMTPFQAVYGRLPPAIIRYAP 559

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
                +QAV ++L +R  LL  LK+NL+QAQ  M  +A+ HR+++ F  GD+V V+LQPYR
Sbjct: 560  SQYDIQAVQDVLHSRDILLAKLKDNLIQAQQHMKLQADRHRQDIVFAEGDKVWVRLQPYR 619

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SVA R NQKL+ +Y+GPF +  ++G VAY+L LP  +KIHPVFHVS LK F+G    T
Sbjct: 620  QHSVALRQNQKLSMKYFGPFTITQRIGKVAYKLALPATAKIHPVFHVSQLKAFRGNEVIT 679



 Score = 62.4 bits (150), Expect(2) = 3e-64
 Identities = 32/58 (55%), Positives = 35/58 (60%)
 Frame = -3

Query: 674 QPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQG 501
           QP  I   R IL++ K IPQVLV W    PEEASWEDRN +       NLEDKV F G
Sbjct: 695 QPKAILQHRTILKKHKQIPQVLVHWEGQQPEEASWEDRNTIEQSYPLFNLEDKVVFNG 752


>gb|PNY17337.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1514

 Score =  223 bits (569), Expect(2) = 6e-64
 Identities = 107/174 (61%), Positives = 136/174 (78%)
 Frame = -1

Query: 1255 NRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMPH 1076
            NR +EQYLR F+ + PK+W + L WAEY YNT++HS+  MTPFQA+YGR PP IP+Y+  
Sbjct: 1205 NRYVEQYLRAFSADYPKKWGRFLSWAEYHYNTSHHSAINMTPFQAVYGRPPPTIPHYVRG 1264

Query: 1075 VATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYRQ 896
             + +QAVD  L  R E+L+ LK+NL +AQ+RMVQ+AN  R +VQF VGD VLVKLQPYRQ
Sbjct: 1265 NSKIQAVDGDLLTRDEILQHLKHNLTRAQHRMVQQANKKRTDVQFAVGDLVLVKLQPYRQ 1324

Query: 895  LSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKG 734
             +VA R N K+ RRY+GPF +L++VG VAY+LGLP ES+IHP FHVSLL+ FKG
Sbjct: 1325 ATVAVRLNHKIARRYFGPFPILERVGTVAYKLGLPSESRIHPTFHVSLLRAFKG 1378



 Score = 51.2 bits (121), Expect(2) = 6e-64
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
 Frame = -3

Query: 698  SFLNQPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLED 519
            S  N+P+  P  I A R + +Q     Q+LVQWS +  E+A+WED  +        +LED
Sbjct: 1391 SVANRPLLHPTAILAGRIVSQQGVPRKQILVQWSHNQQEDATWEDLQIFTDLYGVPDLED 1450

Query: 518  KVNFQGRESDTTRPILQAQEKNLDKAQEESW----EKATLIHIWRKKRRGGPAEQRD 360
            KV FQ   SD+        + N  +   + W    +K     I   ++R  P   RD
Sbjct: 1451 KVIFQEGSSDSFSHKEVPLDTNTTQQLMKEWVSPIDKPNQQDILEPRQRKKPVWTRD 1507


>gb|OMO55084.1| reverse transcriptase [Corchorus capsularis]
          Length = 1254

 Score =  228 bits (580), Expect = 3e-62
 Identities = 109/176 (61%), Positives = 133/176 (75%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +NRCLE YLR FT  QPK W+K+L WAE+SYNT YHS+A MTPFQALYG  PP IP+Y+ 
Sbjct: 969  LNRCLETYLRSFTSEQPKNWVKILHWAEWSYNTAYHSAASMTPFQALYGHPPPTIPSYVA 1028

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
               T   +D  L  R +LL+ LK NL +A NRMV +A+  R+E QF  GD VLVKLQPYR
Sbjct: 1029 GTTTNAQLDNSLIERQQLLKQLKANLARAHNRMVMQADRKRQERQFAEGDWVLVKLQPYR 1088

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGE 731
            Q SV +RSNQKL +RY+GP+K+L K+G VAY+L LP  S++HPVFH+SLLK FKGE
Sbjct: 1089 QQSVVQRSNQKLAKRYFGPYKILKKIGSVAYKLQLPEGSRVHPVFHISLLKAFKGE 1144


>ref|XP_010646171.1| PREDICTED: uncharacterized protein LOC104878095 [Vitis vinifera]
          Length = 799

 Score =  224 bits (571), Expect = 3e-62
 Identities = 105/180 (58%), Positives = 135/180 (75%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            VNRC+EQYLR F    P++W   L WAEY YNT YH+S +MTP+QALYGR+PP+IP Y  
Sbjct: 531  VNRCVEQYLRYFVHQWPRKWSTYLAWAEYWYNTTYHASTKMTPYQALYGRLPPLIPAYPD 590

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
             ++ V  VD+ L +R ELL  LK NL  + NRM Q+AN  RR++QF VGD+VL+KL PYR
Sbjct: 591  GLSPVHEVDQTLLHRDELLHQLKTNLEISMNRMKQQANSKRRDIQFAVGDQVLLKLHPYR 650

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q +V +R++QKL+ RYYGP+ +L+K+G VAYRL LPP ++IHPVFHVSLLKP+ G    T
Sbjct: 651  QQTVFKRAHQKLSSRYYGPYPILEKIGAVAYRLQLPPTARIHPVFHVSLLKPYNGTPAVT 710


>gb|PNX81390.1| transposon Tf2-1 polyprotein, partial [Trifolium pratense]
          Length = 423

 Score =  215 bits (548), Expect = 6e-62
 Identities = 97/184 (52%), Positives = 140/184 (76%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +NRCLE YLRCF   +PK W++ L  AE+ YNT++HS+  MTPF+ALYGR PP + +Y  
Sbjct: 135  LNRCLETYLRCFVSEEPKLWLRYLPLAEFWYNTSFHSAIGMTPFEALYGRKPPNMVHYSA 194

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
              +T+ ++DE+L  + ++L+ILK NL++A+NRM+Q+AN HR++  F  GD V +KLQPYR
Sbjct: 195  GQSTIASLDELLTQKTQILKILKENLLRARNRMIQQANRHRQDHNFAEGDWVYLKLQPYR 254

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SV  R++QKL +R+YGPF+++ ++G VAY+L LP  S+IHPVFHVSLLKP +G+ T  
Sbjct: 255  QNSVHHRTSQKLAKRFYGPFRIIKRIGKVAYQLELPVSSRIHPVFHVSLLKPCQGQPTSQ 314

Query: 718  VSTL 707
            +S +
Sbjct: 315  ISPI 318


>gb|KYP37665.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 976

 Score =  215 bits (547), Expect(2) = 2e-61
 Identities = 104/176 (59%), Positives = 130/176 (73%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +NRCLE YLRCFT + PK W K+L WAEY YNT++H+S  MTPF+A+YGR PP +P Y+ 
Sbjct: 664  LNRCLEMYLRCFTVDDPKSWSKMLPWAEYWYNTSFHTSIGMTPFKAVYGRDPPTLPKYVK 723

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
                  ++ EIL +R + +  LK NL++AQN M + A+  R  V+F VGD V VKLQPYR
Sbjct: 724  DDTEPPSLQEILLHRDQTILCLKQNLMKAQNLMKKYADQKRVHVEFQVGDLVFVKLQPYR 783

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGE 731
            Q SVA R NQKL  RY+GPF V+ ++GLVAY+L LPP +KIHPVFHVSLLKP KGE
Sbjct: 784  QHSVALRKNQKLGLRYFGPFPVMQRIGLVAYKLALPPTAKIHPVFHVSLLKPCKGE 839



 Score = 51.2 bits (121), Expect(2) = 2e-61
 Identities = 28/61 (45%), Positives = 34/61 (55%)
 Frame = -3

Query: 683  PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
            PV QPL +   R ILR+ + IPQVLVQW      + +WED   + S     NLEDKV   
Sbjct: 856  PVIQPLKVLQSRVILRENQHIPQVLVQWEGLDISQVTWEDALTLQSEYPNFNLEDKVVVH 915

Query: 503  G 501
            G
Sbjct: 916  G 916


>gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1502

 Score =  201 bits (512), Expect(2) = 9e-60
 Identities = 105/193 (54%), Positives = 130/193 (67%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+ LE +LRCFT + PK W K++ WAEY YNT + +S  MTPF+ALYGR PP +  Y  
Sbjct: 1227 LNKTLELFLRCFTFHNPKSWFKVMSWAEYWYNTAFQTSIGMTPFKALYGRDPPYLTKYEV 1286

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
             V    A+ E L  R ++L+ LK NL +AQ  M Q+A+ HRREV F VGD VLVKLQPY+
Sbjct: 1287 QVDDPPALREELMERDQILQQLKTNLERAQQYMKQQADKHRREVSFKVGDLVLVKLQPYK 1346

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SVA R NQKL  RY+GPF+V+  VG VAY+L LP  +KIHPVFHVS LKPF G + E 
Sbjct: 1347 QQSVALRKNQKLGMRYFGPFEVIACVGKVAYKLQLPENAKIHPVFHVSQLKPFHGTSQEQ 1406

Query: 718  VSTLRRRVF*TSP 680
               L   +  T P
Sbjct: 1407 YLPLPLTMSDTGP 1419



 Score = 59.3 bits (142), Expect(2) = 9e-60
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
 Frame = -3

Query: 683  PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
            P+ QP  I   R I+R  K + Q+ +QW  +SPEEASWED + + +     NLEDKV F+
Sbjct: 1419 PIFQPATILQARTIVRGNKKVHQLQIQWDLNSPEEASWEDLDELQNKFPNINLEDKVVFK 1478

Query: 503  GRESDTTRP----ILQAQE 459
            G E    RP    IL+A E
Sbjct: 1479 G-EGIVMRPNNTNILEASE 1496


>ref|XP_010655166.1| PREDICTED: uncharacterized protein LOC104880390 [Vitis vinifera]
          Length = 1314

 Score =  220 bits (561), Expect = 1e-59
 Identities = 103/180 (57%), Positives = 135/180 (75%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            VNRC+EQYLRCF    P++W   L WAEY YNT YH+S +MTP+QALYGR+PP+IP Y  
Sbjct: 1041 VNRCVEQYLRCFVHQWPRKWSTYLAWAEYWYNTTYHASTKMTPYQALYGRLPPLIPAYPE 1100

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
             ++ V  VD+ L +R ELL  LK NL  + NRM Q+A+  RR++QF VG++VL+KL PYR
Sbjct: 1101 GLSPVHEVDQTLLHRDELLHQLKTNLEISMNRMKQQADPKRRDIQFAVGNQVLLKLCPYR 1160

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q +V +R++QKL+ RYYGP+ +L+K+  VAYRL LPP ++IHPVFHVSLLKP+ G    T
Sbjct: 1161 QQTVFKRAHQKLSSRYYGPYPILEKIRAVAYRLQLPPTARIHPVFHVSLLKPYNGNPVVT 1220


>dbj|GAU10375.1| hypothetical protein TSUD_419040, partial [Trifolium subterraneum]
          Length = 708

 Score =  202 bits (514), Expect(2) = 1e-59
 Identities = 101/179 (56%), Positives = 122/179 (68%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+C+E YLRCFT   PK W K L WAE  YNT  H+S  MTPFQALYGR PP +  Y  
Sbjct: 431  LNKCVEMYLRCFTFQNPKSWYKALDWAELWYNTALHTSLGMTPFQALYGRPPPTLSRYSH 490

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
                   V + L  R  LL  LK NL +AQ  M  +A+ HRR+V F VG++VLVKLQPYR
Sbjct: 491  SPTDNMVVQQQLMQRDMLLAQLKENLKRAQQVMKAQADKHRRDVHFEVGEQVLVKLQPYR 550

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATE 722
            Q SVA R NQKL  RY+GPF + +K+G VAY+L LPPE++IHPVFH+S LK FKG  T+
Sbjct: 551  QNSVALRKNQKLGMRYFGPFTIKEKIGQVAYKLLLPPEARIHPVFHISQLKQFKGPITD 609



 Score = 58.2 bits (139), Expect(2) = 1e-59
 Identities = 25/61 (40%), Positives = 42/61 (68%)
 Frame = -3

Query: 683 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
           P+ QP  +  +R+I+R+ ++IPQVL++W   S +EA+WED + +       NLEDK++F+
Sbjct: 623 PILQPTTVLQKRDIMRKEQVIPQVLIKWEGLSDKEATWEDVDDISGSYPNFNLEDKIDFK 682

Query: 503 G 501
           G
Sbjct: 683 G 683


>gb|KYP45652.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 1210

 Score =  205 bits (522), Expect(2) = 2e-59
 Identities = 101/175 (57%), Positives = 127/175 (72%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+CLE +LRCFT + PK W K L WAEY YNT++H+S  MTPF+ALYGR PP +  Y  
Sbjct: 897  LNKCLEMFLRCFTFDNPKSWSKGLTWAEYWYNTSFHTSLGMTPFKALYGRDPPTLTRYQR 956

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
                 + V + L  R +LL  LK NL +AQ RM  +A+  R ++QF VGD+VLVKLQPYR
Sbjct: 957  SPTDPRDVQDQLTKRDQLLDQLKCNLTKAQQRMKHQADKKRSDMQFQVGDQVLVKLQPYR 1016

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKG 734
            Q SV  R +QKL+ RY+GPFKVL KVG+VAY+L LP  ++IHPVFH+S LKPFKG
Sbjct: 1017 QHSVVLRKHQKLSMRYFGPFKVLGKVGVVAYKLELPETARIHPVFHISQLKPFKG 1071



 Score = 54.3 bits (129), Expect(2) = 2e-59
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = -3

Query: 683  PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
            P  QP+ I   R IL+  KL+ QVLVQW  SS    SWED   + +     NLEDKV  +
Sbjct: 1089 PFLQPVAILHARTILQGSKLLSQVLVQWDPSSNVPNSWEDVTFIKTHFPYLNLEDKVVLK 1148

Query: 503  GRESDTTRPI--LQAQEKNLDKAQEE 432
            G  +   RP+     +  N++  Q E
Sbjct: 1149 GEGNVMKRPVEPYYMENNNVESLQGE 1174


>gb|KYP53324.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 751

 Score =  205 bits (522), Expect(2) = 2e-59
 Identities = 101/175 (57%), Positives = 127/175 (72%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+CLE +LRCFT + PK W K L WAEY YNT++H+S  MTPF+ALYGR PP +  Y  
Sbjct: 438  LNKCLEMFLRCFTFDNPKSWSKGLTWAEYWYNTSFHTSLGMTPFKALYGRDPPTLTRYQR 497

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
                 + V + L  R +LL  LK NL +AQ RM  +A+  R ++QF VGD+VLVKLQPYR
Sbjct: 498  SPTDPRDVQDQLTKRDQLLDQLKCNLTKAQQRMKHQADKKRSDMQFQVGDQVLVKLQPYR 557

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKG 734
            Q SV  R +QKL+ RY+GPFKVL KVG+VAY+L LP  ++IHPVFH+S LKPFKG
Sbjct: 558  QHSVVLRKHQKLSMRYFGPFKVLGKVGVVAYKLELPETARIHPVFHISQLKPFKG 612



 Score = 54.3 bits (129), Expect(2) = 2e-59
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = -3

Query: 683 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
           P  QP+ I   R IL+  KL+ QVLVQW  SS    SWED   + +     NLEDKV  +
Sbjct: 630 PFLQPVAILHARTILQGSKLLSQVLVQWDPSSNVPNSWEDVTFIKTHFPYLNLEDKVVLK 689

Query: 503 GRESDTTRPI--LQAQEKNLDKAQEE 432
           G  +   RP+     +  N++  Q E
Sbjct: 690 GEGNVMKRPVEPYYMENNNVESLQGE 715


>gb|PRQ23185.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 290

 Score =  204 bits (519), Expect = 3e-59
 Identities = 98/184 (53%), Positives = 133/184 (72%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            VNR LE +LRCF  ++P  W +LL  AE+ YNT YHS+ +MTPFQA+YG  PP +  Y P
Sbjct: 46   VNRSLEHFLRCFVLDKPSSWSELLHCAEWWYNTTYHSTIKMTPFQAVYGTPPPSVSQYSP 105

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
              ++V AVD+ LQ+R  LL++L++++++AQNRM Q+A+ HR E +F  GD V +KL PYR
Sbjct: 106  GSSSVHAVDQALQDRNTLLQLLRSHMLEAQNRMKQQADRHRTEREFNTGDWVFLKLHPYR 165

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SV +R + KL  R+YGPF+V ++VG VAY+L LPP  +IHPVFHVSLLK   GE T  
Sbjct: 166  QQSVVKRPSHKLAPRFYGPFRVRERVGTVAYKLDLPPRCRIHPVFHVSLLKRRVGEGTPL 225

Query: 718  VSTL 707
             ++L
Sbjct: 226  TTSL 229


>gb|PNX93203.1| hypothetical protein L195_g016354 [Trifolium pratense]
          Length = 869

 Score =  211 bits (537), Expect(2) = 3e-59
 Identities = 103/179 (57%), Positives = 125/179 (69%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+CLE YLRC T   PK W K L WAEY YNT YH+S  MTPFQALYGR PP +  Y  
Sbjct: 563  LNKCLEMYLRCLTFQNPKSWFKALDWAEYWYNTAYHNSLGMTPFQALYGRTPPTLVRYTH 622

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
                   V + L  R  L+  LK+NL +AQ  M  +A+ HRR+ QF VG++VLVKLQPYR
Sbjct: 623  SPTDTLDVQQQLMERDRLIATLKDNLKRAQQIMKNQADKHRRDAQFEVGEQVLVKLQPYR 682

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATE 722
            Q SVA R NQKL  RY+GPF +++KVG VAY++ LP E+KIHPVFH+S LK FKG AT+
Sbjct: 683  QNSVALRKNQKLGMRYFGPFTIIEKVGKVAYKVQLPVEAKIHPVFHISQLKQFKGRATD 741



 Score = 47.8 bits (112), Expect(2) = 3e-59
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = -3

Query: 683 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
           P+ QP+ +   R+I+R    I QVL++W   +  +A+WED + +       NLEDKV  +
Sbjct: 755 PILQPIAVLQRRDIVRNEHAIQQVLIKWEGLNDTDATWEDVDEITENYPNFNLEDKVEVK 814

Query: 503 GR 498
           G+
Sbjct: 815 GK 816


>gb|PKA64490.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 593

 Score =  211 bits (537), Expect = 1e-58
 Identities = 102/173 (58%), Positives = 130/173 (75%)
 Frame = -1

Query: 1255 NRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMPH 1076
            NR LEQYLRCFT   P  W+  L WAE SYNT+YHS+   +PFQ LYGR+PP I +Y  +
Sbjct: 297  NRGLEQYLRCFTMESPTAWLTYLPWAELSYNTSYHSAIGCSPFQVLYGRLPPPIHSYEDN 356

Query: 1075 VATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYRQ 896
              +V+AVD +L  R  +LR LK NL + ++RM Q+A+  RR++QF VGD VLVKLQPYRQ
Sbjct: 357  STSVEAVDVMLSQRDAMLRQLKENLHRTRHRMKQQADKKRRDLQFKVGDRVLVKLQPYRQ 416

Query: 895  LSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFK 737
             S+ R++  KL RRYYGP+++L++VG VAYRL LP  S+IHPVFHVSLLKP+K
Sbjct: 417  SSLKRQTYSKLRRRYYGPYEILERVGSVAYRLALPNPSRIHPVFHVSLLKPYK 469


>ref|XP_006598537.1| PREDICTED: uncharacterized protein LOC100793977 [Glycine max]
          Length = 490

 Score =  207 bits (528), Expect = 2e-58
 Identities = 105/179 (58%), Positives = 125/179 (69%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+CLE +LRCFT   PK W K L WAEY YNT YH+S QMTPF+ALYGR PP +  Y P
Sbjct: 180  LNKCLEMFLRCFTFENPKGWYKALAWAEYWYNTTYHTSIQMTPFKALYGRDPPTLVRYQP 239

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
             +  V  V E L  R ELLR LK+NL++AQ  M   A+  R++V   VGD VLVKLQPY+
Sbjct: 240  EITDVPTVQEQLTARDELLRQLKDNLMKAQTYMKNPADKKRQDVNLQVGDLVLVKLQPYK 299

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATE 722
            Q SVA R N KL  R++GPFK+L KVG VAY+L LP E++IH VFHVS LK FKG   E
Sbjct: 300  QHSVALRKNHKLGMRFFGPFKILAKVGAVAYKLELPAEARIHNVFHVSQLKLFKGTPGE 358


>gb|PNX89231.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 408

 Score =  204 bits (520), Expect = 5e-58
 Identities = 104/205 (50%), Positives = 137/205 (66%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+ LE +LRCFT N PK W K++ WAEY YNT + +S  MTPF+ALYGR PP +  Y  
Sbjct: 94   LNKVLELFLRCFTFNNPKSWFKVISWAEYWYNTAFQTSIGMTPFKALYGREPPYLVKYEA 153

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
            H     A+ + L+ R ++L+ LK+NL +AQ  M  +A+ HR++V+F +G+ VLV+LQPYR
Sbjct: 154  HENDSPALQDELRGRDKILQQLKSNLERAQQYMKHQADKHRKDVKFQIGELVLVRLQPYR 213

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SVA R NQKL  RY+GPF+++D VG VAY+L LP  +KIHPVFHVS LKPFKG   E 
Sbjct: 214  QQSVALRKNQKLGMRYFGPFEIIDCVGKVAYKLKLPDNAKIHPVFHVSQLKPFKGTTDEQ 273

Query: 718  VSTLRRRVF*TSPSISHW*YVQRET 644
               L   +  T P I     +Q  T
Sbjct: 274  YLPLPLTMADTGPIIQSAAVLQART 298


>gb|KYP46454.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 1139

 Score =  196 bits (498), Expect(2) = 6e-58
 Identities = 98/178 (55%), Positives = 126/178 (70%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+CLE YLRCFT + PK W +LL WAE+ YNT  H+S+ MTPF+ +YGR PP +  Y  
Sbjct: 836  LNKCLEMYLRCFTHDSPKDWAQLLPWAEFWYNTACHNSSGMTPFKVVYGRDPPKLIKYTV 895

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
              A   ++ E L  R   +  LK NL +AQ  M + A+  RR+++F +GD VLVKLQPYR
Sbjct: 896  DQADPVSLQEQLLTRDLTINKLKQNLHKAQGHMKKYADQKRRQLEFQIGDLVLVKLQPYR 955

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEAT 725
            Q SVA R NQKL+ RY+GPF V++++GLVAY+L LP  +KIHPVFHVS LKP KGE T
Sbjct: 956  QHSVALRKNQKLSLRYFGPFPVIERIGLVAYKLLLPSTTKIHPVFHVSQLKPCKGEHT 1013



 Score = 58.5 bits (140), Expect(2) = 6e-58
 Identities = 36/103 (34%), Positives = 54/103 (52%)
 Frame = -3

Query: 686  QPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNF 507
            QP+ QP  I  ER I++  + +PQ LVQW     E+A+WED   +     + NLEDKVN 
Sbjct: 1027 QPIIQPAKILKERVIVQGQQQVPQKLVQWQGFENEQATWEDTTALQQAFPDFNLEDKVNL 1086

Query: 506  QGRESDTTRPILQAQEKNLDKAQEESWEKATLIHIWRKKRRGG 378
            +G    T + ++  +E   +K  EE  E+      W+ + R G
Sbjct: 1087 KGGGIVTRQNMI--KESLAEKESEEHVEE------WKLRARKG 1121


>gb|OMO55704.1| reverse transcriptase [Corchorus capsularis]
          Length = 2083

 Score =  215 bits (548), Expect = 7e-58
 Identities = 104/184 (56%), Positives = 137/184 (74%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +NRCLE YLR F    PK+W ++L WAE+SYN+++HS+A MTPFQALYG  PP IP+Y+P
Sbjct: 1232 LNRCLETYLRAFVSENPKQWTRILHWAEWSYNSSFHSAACMTPFQALYGFPPPSIPSYLP 1291

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
               TV  +D+ L +R +LL+ LK NL +A NRM  +A+  R E QF  GD VLVKLQPYR
Sbjct: 1292 GSTTVAQLDDSLIDRQQLLKQLKANLARASNRMKIQADRKRVEKQFTEGDLVLVKLQPYR 1351

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SV  R++QKL+++Y+GP+K+L K+G VAY+L LP  S++HPVFHVSLL+ FKG+   T
Sbjct: 1352 QQSVVSRTSQKLSKKYFGPYKILQKIGPVAYKLELPEGSRVHPVFHVSLLRAFKGDLPAT 1411

Query: 718  VSTL 707
             S L
Sbjct: 1412 PSPL 1415


>gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1535

 Score =  203 bits (516), Expect(2) = 8e-58
 Identities = 103/193 (53%), Positives = 133/193 (68%)
 Frame = -1

Query: 1258 VNRCLEQYLRCFTQNQPKRWIKLLKWAEYSYNTNYHSSAQMTPFQALYGRVPPIIPNYMP 1079
            +N+ LE +LRCFT + PK W K+L WAEY YNT + +S  MTPF+ALYGR PP +  Y  
Sbjct: 1224 LNKALELFLRCFTFHNPKSWSKVLSWAEYWYNTAFQTSIGMTPFKALYGRDPPYLTKYEA 1283

Query: 1078 HVATVQAVDEILQNRAELLRILKNNLVQAQNRMVQRANLHRREVQFLVGDEVLVKLQPYR 899
             V    A+ E L  R ++L+ LK+NL +AQ  M ++A+ HR++V F VGD VLVKLQPYR
Sbjct: 1284 QVTDPPALQEELMERDKILQQLKSNLDRAQQYMKKQADKHRKDVTFQVGDLVLVKLQPYR 1343

Query: 898  QLSVARRSNQKLTRRYYGPFKVLDKVGLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 719
            Q SVA R NQKL  RY+GPF+++  +G VAY+L LP  +KIHPVFHVS LKPFKG A++ 
Sbjct: 1344 QQSVALRKNQKLGMRYFGPFEIIACIGAVAYKLKLPDNAKIHPVFHVSQLKPFKGAASDQ 1403

Query: 718  VSTLRRRVF*TSP 680
               L   +  T P
Sbjct: 1404 YLPLPLTMTETGP 1416



 Score = 51.2 bits (121), Expect(2) = 8e-58
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = -3

Query: 683  PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 504
            P+ QP+ +   R I+R  + + Q+LVQW  ++  EA+WED + +       NLEDKV F 
Sbjct: 1416 PIMQPIAVLQARTIMRGTQRVHQILVQWDTNAEAEATWEDFDDLQLKFPTLNLEDKVVFN 1475

Query: 503  GRESDTTRP 477
            G E    RP
Sbjct: 1476 G-EGIVMRP 1483