BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00009511
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAE31340.1| hypothetical protein AXG93_4510s1160 [Marchantia ...   231   7e-71
gb|KYP72416.1| Retrovirus-related Pol polyprotein from transposo...   219   8e-68
gb|PNX96445.1| copia LTR rider [Trifolium pratense]                   233   1e-67
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   232   3e-67
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]    228   8e-66
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   224   2e-65
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   223   4e-64
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     222   8e-64
emb|CAA37920.1| unnamed protein product, partial [Arabidopsis th...   212   3e-63
gb|KYP46595.1| Retrovirus-related Pol polyprotein from transposo...   204   4e-63
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   218   2e-62
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   218   2e-62
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   209   5e-62
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   210   1e-61
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             216   1e-61
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...   215   3e-61
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   201   4e-61
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen...   206   6e-61
gb|POM77273.1| Integrase catalytic core protein [Phytophthora pa...   209   8e-61
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        213   2e-60

>gb|OAE31340.1| hypothetical protein AXG93_4510s1160 [Marchantia polymorpha subsp.
           ruderalis]
          Length = 467

 Score =  231 bits (588), Expect = 7e-71
 Identities = 113/183 (61%), Positives = 135/183 (73%), Gaps = 3/183 (1%)
 Frame = +1

Query: 7   YEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECESV 177
           Y++A+   +S  W  AM EEM SL+ N TW +VP+P +   V C+WL+K+K      E  
Sbjct: 253 YQDAIAGSDSEKWKEAMREEMESLYRNKTWNIVPRPKDQKPVTCRWLYKIKEGVVNSEEP 312

Query: 178 RFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGDL 357
           RFKARLVAKGFTQ EG+DY EIF+PVVK+ T+RIMLAL  Q+N EL+QMDVKTAFLHGDL
Sbjct: 313 RFKARLVAKGFTQVEGVDYNEIFSPVVKYKTIRIMLALVVQYNLELQQMDVKTAFLHGDL 372

Query: 358 DEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRCL 537
           +E IYM QP G+  +K  D VCLLKKSLYGLKQSPR W K+FD  ML   + RSSYD CL
Sbjct: 373 EEVIYMEQPPGYEVQKGRDMVCLLKKSLYGLKQSPRQWYKRFDTFMLEQGYNRSSYDSCL 432

Query: 538 YFK 546
           YFK
Sbjct: 433 YFK 435


>gb|KYP72416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 328

 Score =  219 bits (557), Expect = 8e-68
 Identities = 106/182 (58%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
 Frame = +1

Query: 10  EEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV---R 180
           E  L SK    WLNAM EEM SLH N+TW ++ KP    VV CKWLFK K   + V   R
Sbjct: 15  EFVLVSKEKQSWLNAMKEEMKSLHDNHTWKMIKKPIGSRVVSCKWLFKKKEGIQGVEPAR 74

Query: 181 FKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGDLD 360
           +KARLVA+GFTQKEG+D+ E+F+PVVK  ++RI+L++ A  + EL+QMDVKTAFL+G LD
Sbjct: 75  YKARLVARGFTQKEGVDFNEVFSPVVKHRSIRILLSMVATLDLELEQMDVKTAFLYGKLD 134

Query: 361 EKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRCLY 540
           E+I M+QP GFV+K   D VC L KSL GLKQSPR WN++FD+ M  + F RS YD C+Y
Sbjct: 135 EEILMQQPEGFVEKGKEDHVCKLNKSLCGLKQSPRQWNRRFDEFMTKISFNRSQYDNCVY 194

Query: 541 FK 546
           FK
Sbjct: 195 FK 196


>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
          Length = 1318

 Score =  233 bits (595), Expect = 1e-67
 Identities = 106/185 (57%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
 Frame = +1

Query: 1    KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV- 177
            + Y+E ++S+N  +WL AM++EM SLH N+TW L+ KPA   +V CKW+FKVK   E V 
Sbjct: 795  RDYKEVMRSRNKTEWLKAMDDEMKSLHDNHTWELIKKPAGARLVSCKWIFKVKEGIEGVT 854

Query: 178  --RFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
              R+KARLVA+GFTQKEG+D+ ++F+PVVK  ++R++LA+ AQF+ EL+QMDVKTAFL+G
Sbjct: 855  SKRYKARLVARGFTQKEGVDFNDVFSPVVKHRSIRMLLAMVAQFDLELEQMDVKTAFLYG 914

Query: 352  DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
            DLDE I MRQP G+V++   D+VC LK+SLYGLKQSPR WN++FD  M  + F RS +D 
Sbjct: 915  DLDETILMRQPEGYVERGKEDYVCKLKRSLYGLKQSPRQWNRRFDKFMARISFIRSQFDH 974

Query: 532  CLYFK 546
            C+YF+
Sbjct: 975  CVYFR 979


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  232 bits (591), Expect = 3e-67
 Identities = 110/185 (59%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
 Frame = +1

Query: 1    KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---E 171
            +SY+EA++SK+S  WL++M++EM SL  N TW LVP P     VDCKWLFK+K+     E
Sbjct: 915  RSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDE 974

Query: 172  SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
              ++K+RLVAKGF+QKEGIDY E+F+PVVK  ++R++LA+ + FN EL Q+DVKTAFLHG
Sbjct: 975  PPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHG 1034

Query: 352  DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
            +L+E+IYM+QP GFVD +  D VC LKKSLYGLKQSPR W K+FD  M+S +F R+ YD 
Sbjct: 1035 NLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDS 1094

Query: 532  CLYFK 546
            C+YFK
Sbjct: 1095 CVYFK 1099


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score =  228 bits (581), Expect = 8e-66
 Identities = 112/185 (60%), Positives = 139/185 (75%), Gaps = 3/185 (1%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV-- 177
            +Y EA+ S++S  W  AM EEM+SLH N TW+LV KP    +V CKW+FK+K     V  
Sbjct: 791  TYNEAIASEDSERWQVAMQEEMDSLHKNQTWVLVDKPKGQKIVTCKWIFKLKEGIPGVEG 850

Query: 178  -RFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGD 354
             R+KARLVAKGFTQ+ GIDY E+F+PVVK +++R++L+L A    EL+Q+DVKTAFLHG 
Sbjct: 851  PRYKARLVAKGFTQRAGIDYNEVFSPVVKHSSIRVILSLTAVMGMELEQLDVKTAFLHGY 910

Query: 355  LDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRC 534
            LDE+I M QP GFV K   D VCLLK+SLYGLKQSPR W K+FD+ M+S  FKRSSYD C
Sbjct: 911  LDEEILMNQPQGFVKKGEEDKVCLLKRSLYGLKQSPRQWYKRFDEYMVSNSFKRSSYDAC 970

Query: 535  LYFKE 549
            +YFKE
Sbjct: 971  VYFKE 975


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  224 bits (572), Expect = 2e-65
 Identities = 108/186 (58%), Positives = 140/186 (75%), Gaps = 3/186 (1%)
 Frame = +1

Query: 1    KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---E 171
            +SY+EA + K    W NA +EEM+SL  N TW LV KP N  ++ C+WLFK+K+     E
Sbjct: 518  ESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGVE 577

Query: 172  SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
             VRFKARLVAKG+TQ+EG+DY EIFAPVVK T++R+++++    + EL+QMDVKTAFLHG
Sbjct: 578  PVRFKARLVAKGYTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKTAFLHG 637

Query: 352  DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
            DL+E++YM QP GF+  K  D VCLLKKSLYGLKQSPR WNK+F   M+  KF RS++D 
Sbjct: 638  DLEEELYMEQPEGFITDKTKDKVCLLKKSLYGLKQSPRQWNKRFGRFMMEQKFIRSAHDA 697

Query: 532  CLYFKE 549
            C+Y K+
Sbjct: 698  CVYVKQ 703


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  223 bits (568), Expect = 4e-64
 Identities = 111/185 (60%), Positives = 137/185 (74%), Gaps = 3/185 (1%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKN---ECES 174
            SY EA   K++A W  AM EEM SLH N TW+LV +P     V CKW++K K    E E+
Sbjct: 1380 SYIEATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKGMRTVGCKWVYKKKEGIPEVEA 1439

Query: 175  VRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGD 354
             RFKARLVAKGF+QKEGIDY EIF+PVVK +++R++LAL AQF+ EL+Q+DVKTAFLHGD
Sbjct: 1440 ARFKARLVAKGFSQKEGIDYNEIFSPVVKHSSIRVLLALVAQFDLELQQLDVKTAFLHGD 1499

Query: 355  LDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRC 534
            L+E IYM QP GF+ +   D VC LKKSLYGLKQSPR W K+FD  M +  F RS++D C
Sbjct: 1500 LEETIYMDQPEGFLAEGKEDHVCQLKKSLYGLKQSPRQWYKRFDAFMTTHGFSRSAFDSC 1559

Query: 535  LYFKE 549
            +Y K+
Sbjct: 1560 VYHKK 1564


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  222 bits (566), Expect = 8e-64
 Identities = 104/183 (56%), Positives = 139/183 (75%), Gaps = 3/183 (1%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECES 174
            +YE+A++S  SA W+ AM EEM SLH N+ W LVPKP    +V CKW+F+ K   +E ++
Sbjct: 784  TYEDAIESVESAGWIGAMTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDA 843

Query: 175  VRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGD 354
            + +KARLVAKG++QKEG+DY EIF+PVVK T++R++L++ AQ++ E++QMDVKTAFLHGD
Sbjct: 844  ITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGD 903

Query: 355  LDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRC 534
            L+E IYM QP GFV+    + VC LKKSLYGLKQSPR W K FD  ML + + R  YD C
Sbjct: 904  LEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCC 963

Query: 535  LYF 543
            +Y+
Sbjct: 964  VYY 966


>emb|CAA37920.1| unnamed protein product, partial [Arabidopsis thaliana]
          Length = 494

 Score =  212 bits (539), Expect = 3e-63
 Identities = 101/186 (54%), Positives = 137/186 (73%), Gaps = 3/186 (1%)
 Frame = +1

Query: 1   KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---E 171
           +SY+EA  +K    W  A +EEM+SL  N TW+LV KP +  ++ C+WLFK+K+     E
Sbjct: 72  QSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVE 131

Query: 172 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
            VR+KARLVAKG+TQ+EG+DY EIFAPV K T++RI++++    + EL+QMDVKTAFLHG
Sbjct: 132 PVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTAFLHG 191

Query: 352 DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
           +L+E++YM QP GF+ +   + VCLLKKSLYGLKQSPR WNK+F   M+   F RS +D 
Sbjct: 192 ELEEELYMEQPDGFISEDGENKVCLLKKSLYGLKQSPRQWNKRFSRFMIDQNFIRSEHDA 251

Query: 532 CLYFKE 549
           C+Y K+
Sbjct: 252 CVYVKQ 257


>gb|KYP46595.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 248

 Score =  204 bits (519), Expect = 4e-63
 Identities = 105/185 (56%), Positives = 128/185 (69%), Gaps = 3/185 (1%)
 Frame = +1

Query: 1   KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---E 171
           K+    + SK S  WLNAM EEM SLH N T  LV KP    VV CKWLFK K      E
Sbjct: 6   KTVRVVMTSKESKKWLNAMREEMKSLHENQTRKLVKKPPRARVVSCKWLFKKKERIPRIE 65

Query: 172 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
             RFKARLVA+GFTQK+GID+ E+  PVVK  ++ ++L++ AQ + EL+QMDVKTAFL+G
Sbjct: 66  PERFKARLVARGFTQKKGIDFNEVLFPVVKHRSIILILSMVAQLDLELEQMDVKTAFLYG 125

Query: 352 DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
            LDE+I M QP GF  K   D+VC L KSLYGLKQSP+ WN++FD+ M  +KF  S YD 
Sbjct: 126 YLDEEILMSQPEGFEVKGKVDYVCKLTKSLYGLKQSPKQWNRRFDEFMEHVKFIESHYDN 185

Query: 532 CLYFK 546
           C+YFK
Sbjct: 186 CVYFK 190


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  218 bits (556), Expect = 2e-62
 Identities = 107/185 (57%), Positives = 135/185 (72%), Gaps = 3/185 (1%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---ES 174
            SY EA+    SA W  AM+EE+ SLH N+TW LV  P+N  +V CKW+FK K      E+
Sbjct: 1303 SYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEA 1362

Query: 175  VRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGD 354
             RFKARLVAKGFTQKEGIDY E+F+PVVK +++R++LA+ A+ + EL+Q+DVKTAFLHG+
Sbjct: 1363 TRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGE 1422

Query: 355  LDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRC 534
            L+E IYMRQP GF      D VCLLKKSLYGLKQSPR W K+FD  M+   + R  YD C
Sbjct: 1423 LEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDAC 1482

Query: 535  LYFKE 549
            +Y ++
Sbjct: 1483 VYHRK 1487


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  218 bits (556), Expect = 2e-62
 Identities = 107/185 (57%), Positives = 135/185 (72%), Gaps = 3/185 (1%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---ES 174
            SY EA+    SA W  AM+EE+ SLH N+TW LV  P+N  +V CKW+FK K      E+
Sbjct: 1324 SYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEA 1383

Query: 175  VRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGD 354
             RFKARLVAKGFTQKEGIDY E+F+PVVK +++R++LA+ A+ + EL+Q+DVKTAFLHG+
Sbjct: 1384 TRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGE 1443

Query: 355  LDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRC 534
            L+E IYMRQP GF      D VCLLKKSLYGLKQSPR W K+FD  M+   + R  YD C
Sbjct: 1444 LEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDAC 1503

Query: 535  LYFKE 549
            +Y ++
Sbjct: 1504 VYHRK 1508


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  209 bits (533), Expect = 5e-62
 Identities = 102/186 (54%), Positives = 136/186 (73%), Gaps = 3/186 (1%)
 Frame = +1

Query: 1   KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV- 177
           KSY+EA++SK ++ WL AM+EEM SL  N TW LVP P     V CKW+ K K     V 
Sbjct: 194 KSYKEAIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGVE 253

Query: 178 --RFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
             RFKARLVAKGF+QKEGIDY E+F+PVVK  T+R++LA+ +  + +L+Q++VK AFLHG
Sbjct: 254 PSRFKARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHG 313

Query: 352 DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
           +L+E++YM QP GF++    + VCLLKKSLYGLKQSPR W K+FD  M+S  F R+ +D 
Sbjct: 314 NLEEQVYMSQPDGFLEVGKKNHVCLLKKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDN 373

Query: 532 CLYFKE 549
           C+Y ++
Sbjct: 374 CVYSRK 379


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment)
 emb|CAA37917.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 587

 Score =  210 bits (534), Expect = 1e-61
 Identities = 101/186 (54%), Positives = 136/186 (73%), Gaps = 3/186 (1%)
 Frame = +1

Query: 1   KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNEC---E 171
           +SY+EA   K    W  A +EEM+SL  N TW+LV KP +  ++ C+WLFK+K+     E
Sbjct: 71  QSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQDRKIIGCRWLFKMKSGIPGVE 130

Query: 172 SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
            VR+KARLVAKG+TQ+EG+DY EIFAPVVK T +RI++++    + EL+QMDVKTAFLHG
Sbjct: 131 PVRYKARLVAKGYTQREGVDYQEIFAPVVKHTFIRILMSVVVDQDLELEQMDVKTAFLHG 190

Query: 352 DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
           +L+E++YM QP GF+ +   + VCLLKK LYGLKQSPR WNK+F+  M+   F RS +D 
Sbjct: 191 ELEEELYMEQPEGFISEDGKNKVCLLKKLLYGLKQSPRQWNKRFNRFMIDQNFIRSEHDA 250

Query: 532 CLYFKE 549
           C+Y K+
Sbjct: 251 CVYVKQ 256


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  216 bits (550), Expect = 1e-61
 Identities = 101/183 (55%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV-- 177
            +++EA+ S + + W  AM EE+ +LH NNTW LVP P     +  KW+FK+K   +    
Sbjct: 783  TFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQVE 842

Query: 178  RFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGDL 357
            R++ARLV KG+ QKEGID+ EIF+PVV+ TTVR++LA+CA FN  L+Q+DVKTAFLHGDL
Sbjct: 843  RYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDL 902

Query: 358  DEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRCL 537
            +E+IYM QP GF DK+N + VC L KSLYGLKQ+PRCW K+FD  ++ L + R + D C 
Sbjct: 903  EEEIYMLQPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCA 962

Query: 538  YFK 546
            YFK
Sbjct: 963  YFK 965


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score =  215 bits (547), Expect = 3e-61
 Identities = 104/186 (55%), Positives = 137/186 (73%), Gaps = 3/186 (1%)
 Frame = +1

Query: 1    KSYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESV- 177
            KSYEEALKS     W NAM EEM+S   ++TW L+ KP    ++ CKW+FK+K     V 
Sbjct: 734  KSYEEALKSSKRKQWENAMKEEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGVE 793

Query: 178  --RFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
              R+KARLVAKGF+Q+EGIDY E+F+ VVK  ++R+ML+L    ++EL+QMDVKTAFLHG
Sbjct: 794  KQRYKARLVAKGFSQQEGIDYNEVFSLVVKHVSIRLMLSLMVNMDYELEQMDVKTAFLHG 853

Query: 352  DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
            +L+E+I M QP GF+ + N + VCLL+KSLYGLKQSPR WN++FD  M   KF+RS YD 
Sbjct: 854  NLEERILMSQPEGFIQEGNENKVCLLRKSLYGLKQSPRLWNQRFDAFMKDQKFERSCYDP 913

Query: 532  CLYFKE 549
            C+Y ++
Sbjct: 914  CVYMRD 919


>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  201 bits (512), Expect = 4e-61
 Identities = 101/185 (54%), Positives = 130/185 (70%), Gaps = 3/185 (1%)
 Frame = +1

Query: 4   SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECES--- 174
           +Y++A++S     W  AMNEEM SL+ N+TW L   P     + CKW+F  K    +   
Sbjct: 112 TYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCKWVFAKKEGFPNQVD 171

Query: 175 VRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGD 354
           VR+KARLVAKG+ QKEGIDY E+F+PVVK +++RIMLAL AQ + EL QMDVKTAFLHG+
Sbjct: 172 VRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVAQLDLELVQMDVKTAFLHGN 231

Query: 355 LDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRC 534
           L+E+IYM QP GF      + VC L+KSLYGLKQS R W K+FD+ ML   +KRS YD C
Sbjct: 232 LEEEIYMTQPEGFKVAGKENMVCKLEKSLYGLKQSSRQWYKRFDEFMLRQGYKRSKYDHC 291

Query: 535 LYFKE 549
           +Y ++
Sbjct: 292 VYLRK 296


>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 502

 Score =  206 bits (524), Expect = 6e-61
 Identities = 95/166 (57%), Positives = 128/166 (77%), Gaps = 3/166 (1%)
 Frame = +1

Query: 55  MNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVK---NECESVRFKARLVAKGFTQKEG 225
           M EEM SLH N+ W LVPKP    +V CKW+F+ K   ++ +++++KARLVAKG++QKEG
Sbjct: 1   MTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGVHDADAIKYKARLVAKGYSQKEG 60

Query: 226 IDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGDLDEKIYMRQPIGFVDKK 405
           +DY EIF+PVVK T++R++L++ AQ++ E++QMDVKTAFLHGDL+E IYM QP GFV+  
Sbjct: 61  VDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETG 120

Query: 406 NPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRCLYF 543
             D VC L+KSLYGLKQSPR W K+FD  ML + + R  YD C+Y+
Sbjct: 121 KEDLVCRLRKSLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYY 166


>gb|POM77273.1| Integrase catalytic core protein [Phytophthora palmivora var.
           palmivora]
          Length = 643

 Score =  209 bits (531), Expect = 8e-61
 Identities = 99/183 (54%), Positives = 131/183 (71%)
 Frame = +1

Query: 4   SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNECESVRF 183
           ++  A++S N+A W  A + E+NSL  N TW+LVP P     + C+W+F++K E ++   
Sbjct: 369 TFTSAMESSNAAKWKEACDSEINSLRKNETWVLVPLPKGRKAISCRWVFRIK-ENQAGEI 427

Query: 184 KARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHGDLDE 363
           + RLVAKGF QK GIDY E FAPV KFT++RI+L+L A++N  + QMDVKTAFL+G LDE
Sbjct: 428 ERRLVAKGFLQKYGIDYEETFAPVAKFTSIRILLSLAAKYNLTVHQMDVKTAFLNGWLDE 487

Query: 364 KIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDRCLYF 543
            IYM QP GF+D+ +PDFVC LK+SLYGLKQSPR WN+  D  ML L FK+   D C+Y 
Sbjct: 488 DIYMVQPDGFIDEAHPDFVCKLKRSLYGLKQSPRMWNQTIDKFMLELGFKKCEADHCIYV 547

Query: 544 KED 552
           K +
Sbjct: 548 KRN 550


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  213 bits (541), Expect = 2e-60
 Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
 Frame = +1

Query: 4    SYEEALKSKNSADWLNAMNEEMNSLHVNNTWILVPKPANCSVVDCKWLFKVKNE----CE 171
            ++ EA++S +   WL AM +EM SL  N TW L+P P N  +++CKW+FK +NE     E
Sbjct: 816  NFSEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFK-RNEGIPDVE 874

Query: 172  SVRFKARLVAKGFTQKEGIDYTEIFAPVVKFTTVRIMLALCAQFNWELKQMDVKTAFLHG 351
              ++KARLVA+GFTQ+EG+D+ EIF+PVVK +++RI+LA+ A  + EL+QMDVKTAFLHG
Sbjct: 875  PPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHG 934

Query: 352  DLDEKIYMRQPIGFVDKKNPDFVCLLKKSLYGLKQSPRCWNKKFDD*MLSLKFKRSSYDR 531
            +L+E+I M QP GF  K   D+VCLL KSLYGLKQSPR W ++FDD M+S  ++RS YD 
Sbjct: 935  NLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDS 994

Query: 532  CLYF 543
            C+YF
Sbjct: 995  CVYF 998