BLASTX nr result

ID: Rehmannia30_contig00009368 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00009368
         (516 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083598.1| DNA ligase 1 [Sesamum indicum]                     62   7e-08
gb|PIN01731.1| Chromatin-associated protein Dek [Handroanthus im...    59   6e-07

>ref|XP_011083598.1| DNA ligase 1 [Sesamum indicum]
          Length = 579

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 31/54 (57%), Positives = 36/54 (66%)
 Frame = -1

Query: 516 TEEEDDDISEPSHSEDDQGDDNKVPXXXXXXXXXXXXXETDEDQDEPKKQMVVE 355
           T++EDDD SEPSHSE DQ DDN  P             ETDEDQD+P+KQ+VVE
Sbjct: 332 TDDEDDDKSEPSHSEADQDDDNSDPGAESDQEENDSEEETDEDQDKPEKQVVVE 385


>gb|PIN01731.1| Chromatin-associated protein Dek [Handroanthus impetiginosus]
          Length = 575

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 32/59 (54%), Positives = 36/59 (61%)
 Frame = -1

Query: 177 PLTKKQKVEKESEKDXXXXXXXXXXXXXXXXXXXXKVLEKDQGDSESSENAEKEPTKQE 1
           PLTKKQKVEKESEKD                    KVLEKDQG+ +S + AEKEPTK+E
Sbjct: 440 PLTKKQKVEKESEKDTSPPEKGTSSSKKKASKSSSKVLEKDQGEGQSGKKAEKEPTKEE 498


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