BLASTX nr result

ID: Rehmannia30_contig00006703 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00006703
         (1081 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    47   8e-09
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    45   3e-07

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
            hygrometricum]
          Length = 161

 Score = 47.0 bits (110), Expect(2) = 8e-09
 Identities = 25/69 (36%), Positives = 41/69 (59%)
 Frame = -3

Query: 1076 EGSVYAIKDFGIAXXXXXXXXXXXXXKIQFHGKTHIFQLDDNALPRILFNFKSFRDLSIV 897
            +G ++AIK+  +A             KI F  KTH+ ++ D++ P I+F+FKSF D+   
Sbjct: 56   DGHLFAIKNIIVAENRMKYKTTTSKYKINFITKTHVCEIFDDSFPSIMFDFKSFNDVKNA 115

Query: 896  ENVDETVLF 870
            E ++ET+LF
Sbjct: 116  E-IEETMLF 123



 Score = 42.7 bits (99), Expect(2) = 8e-09
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -2

Query: 777 DIIGRVVAMQSAQSKELGGKLTRFIDITLEDLE 679
           D+IG+VVA  S QS+E GG+ TR +DI L+D E
Sbjct: 124 DVIGQVVARDSPQSREFGGRETRLLDIVLQDYE 156


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
            hygrometricum]
          Length = 388

 Score = 44.7 bits (104), Expect(2) = 3e-07
 Identities = 24/69 (34%), Positives = 41/69 (59%)
 Frame = -3

Query: 1076 EGSVYAIKDFGIAXXXXXXXXXXXXXKIQFHGKTHIFQLDDNALPRILFNFKSFRDLSIV 897
            EG ++AIK+  +A             KI F  KTH+ ++ D++ P ++F+FKSF ++   
Sbjct: 136  EGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNA 195

Query: 896  ENVDETVLF 870
            E ++ET+LF
Sbjct: 196  E-IEETMLF 203



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 777 DIIGRVVAMQSAQSKELGGKLTRFIDITLEDLE 679
           D+IG+VVA  S QSKE GG+ TR + I L D E
Sbjct: 204 DVIGQVVARDSPQSKEFGGRETRLLYIVLHDYE 236


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