BLASTX nr result

ID: Rehmannia30_contig00005438 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00005438
         (500 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101548.1| TBC1 domain family member 13 isoform X2 [Ses...    86   2e-16
ref|XP_012844609.1| PREDICTED: TBC1 domain family member 13 [Ery...    66   2e-09
ref|XP_022871475.1| TBC1 domain family member 13-like [Olea euro...    64   1e-08

>ref|XP_011101548.1| TBC1 domain family member 13 isoform X2 [Sesamum indicum]
 ref|XP_020547026.1| TBC1 domain family member 13 isoform X1 [Sesamum indicum]
          Length = 475

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 51/97 (52%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
 Frame = -1

Query: 350 MMKKRVPDWLNXXXXXXXXXXXXXXXXPHNVA------AIAEPSVPIPPPAVERPSDTPV 189
           MMKKRVPDWLN                P +VA      AIAE  VP+PPPAV RP++ P 
Sbjct: 1   MMKKRVPDWLNSSLWSSPNRSPSPPPTPQDVAPKTTAPAIAEAPVPVPPPAVARPAERPA 60

Query: 188 SSSVHAHS-TKGETRDPLSGTGTYGNNVSVCNSDEEN 81
           SSS +A S  KGETR+PLSG    GN+ SVC+SD+EN
Sbjct: 61  SSSAYATSAAKGETRNPLSGHS--GNSTSVCDSDDEN 95


>ref|XP_012844609.1| PREDICTED: TBC1 domain family member 13 [Erythranthe guttata]
 gb|EYU31447.1| hypothetical protein MIMGU_mgv1a005668mg [Erythranthe guttata]
          Length = 475

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
 Frame = -1

Query: 350 MMKKRVPDWLNXXXXXXXXXXXXXXXXPH---NVAAIAEPSVPIPPP-AVERPSDTP--- 192
           M+ KRVPDWLN                     +  AI++P + IPPP A+ RPS+ P   
Sbjct: 1   MVNKRVPDWLNSSLWSSPQPPPSPPPPSPPPLSAVAISDPPLLIPPPPAIARPSEPPPSS 60

Query: 191 VSSSVHAHSTKGETRDPLSGTGTYGNNVSV-CNSDEEN 81
            SSS +AH+ KGE RDPL  T +Y NN SV C  D+E+
Sbjct: 61  TSSSPYAHAPKGENRDPL--TSSYANNTSVYCTDDDED 96


>ref|XP_022871475.1| TBC1 domain family member 13-like [Olea europaea var. sylvestris]
          Length = 528

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 45/111 (40%), Positives = 55/111 (49%), Gaps = 21/111 (18%)
 Frame = -1

Query: 350 MMKKRVPDWLNXXXXXXXXXXXXXXXXPHN-----------------VAAIAEPSVPIPP 222
           M+KKRVPDWLN                 ++                 V +I EP VP+PP
Sbjct: 1   MVKKRVPDWLNSSLWSSQAQQPQSPPGSNDSVESHVPAARGAAKSAVVESIVEPPVPVPP 60

Query: 221 PAVERPSDTPVSSSVHAH-STKGETRDPLS--GTGTYGN-NVSVCNSDEEN 81
           P V RP + P SSSVH+  S KGE +DPL+      YGN N S  NS+EEN
Sbjct: 61  PNVSRPVEPP-SSSVHSSTSVKGEVKDPLNSHNGSNYGNTNNSSYNSEEEN 110


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