BLASTX nr result

ID: Rehmannia30_contig00005406 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00005406
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN18796.1| Chaperone HSP104 [Handroanthus impetiginosus]           67   3e-10
gb|EYU24516.1| hypothetical protein MIMGU_mgv1a0010411mg, partia...    65   8e-10
ref|XP_012852691.1| PREDICTED: ATP-dependent Clp protease ATP-bi...    65   9e-10
ref|XP_022856568.1| ATP-dependent Clp protease ATP-binding subun...    57   4e-07

>gb|PIN18796.1| Chaperone HSP104 [Handroanthus impetiginosus]
          Length = 924

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 240 MARALLQSTNLPSSVGWANNGQFEGSNKTKKASTMLCSS 356
           MA AL+QSTNL SSVGW NNGQFEGSNK K+A TMLCS+
Sbjct: 1   MAHALVQSTNLTSSVGWVNNGQFEGSNKYKRAPTMLCST 39


>gb|EYU24516.1| hypothetical protein MIMGU_mgv1a0010411mg, partial [Erythranthe
           guttata]
          Length = 400

 Score = 65.1 bits (157), Expect = 8e-10
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 240 MARALLQSTNLPSSVGWANNGQFEGSNKTKKASTMLCSS 356
           MARAL+QSTNLPSSV WANN  FEGSNKTK   TMLC+S
Sbjct: 1   MARALVQSTNLPSSVSWANNCPFEGSNKTKAGPTMLCNS 39


>ref|XP_012852691.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
           homolog CD4B, chloroplastic [Erythranthe guttata]
          Length = 921

 Score = 65.1 bits (157), Expect = 9e-10
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 240 MARALLQSTNLPSSVGWANNGQFEGSNKTKKASTMLCSS 356
           MARAL+QSTNLPSSV WANN  FEGSNKTK   TMLC+S
Sbjct: 1   MARALVQSTNLPSSVSWANNCPFEGSNKTKAGPTMLCNS 39


>ref|XP_022856568.1| ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B,
           chloroplastic-like [Olea europaea var. sylvestris]
          Length = 939

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +3

Query: 228 LKADMARALLQSTNLPSSVGWANNGQFEGSNKTKKASTMLCS 353
           LK +MA AL+QSTNLPSSV    NGQ +GSNKTK A+ MLCS
Sbjct: 12  LKGNMANALVQSTNLPSSVTNRRNGQLKGSNKTKGAAKMLCS 53


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