BLASTX nr result

ID: Rehmannia30_contig00004422 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00004422
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088289.1| polyadenylate-binding protein RBP47 [Sesamum...   117   2e-28
gb|PIN12328.1| Apoptosis-promoting RNA-binding protein TIA-1/TIA...   115   4e-28
gb|PIN20448.1| Apoptosis-promoting RNA-binding protein TIA-1/TIA...   115   8e-28
ref|XP_022897109.1| polyadenylate-binding protein RBP47-like iso...   114   1e-27
ref|XP_015060188.1| PREDICTED: polyadenylate-binding protein RBP...   115   1e-27
ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP...   115   1e-27
ref|XP_022897108.1| polyadenylate-binding protein RBP47-like iso...   114   1e-27
ref|XP_022897107.1| polyadenylate-binding protein RBP47-like iso...   114   2e-27
ref|XP_012831045.1| PREDICTED: polyadenylate-binding protein RBP...   114   2e-27
ref|XP_022897106.1| polyadenylate-binding protein RBP47-like iso...   114   2e-27
ref|XP_009794615.1| PREDICTED: polyadenylate-binding protein RBP...   114   3e-27
ref|XP_011092727.1| polyadenylate-binding protein RBP47-like iso...   113   3e-27
ref|NP_001312351.1| polyadenylate-binding protein RBP47-like [Ni...   114   3e-27
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   114   3e-27
ref|XP_019230881.1| PREDICTED: polyadenylate-binding protein RBP...   114   3e-27
ref|XP_009590296.1| PREDICTED: polyadenylate-binding protein RBP...   114   4e-27
ref|XP_009794616.1| PREDICTED: polyadenylate-binding protein RBP...   114   4e-27
ref|XP_011092726.1| polyadenylate-binding protein RBP47-like iso...   113   4e-27
gb|KZV54012.1| hypothetical protein F511_40647 [Dorcoceras hygro...   113   4e-27
ref|NP_001275480.1| DNA binding protein ACBF-like [Solanum tuber...   112   5e-27

>ref|XP_011088289.1| polyadenylate-binding protein RBP47 [Sesamum indicum]
          Length = 423

 Score =  117 bits (293), Expect = 2e-28
 Identities = 54/60 (90%), Positives = 56/60 (93%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE YLQSCFSQTGEV SVKIIRNK TGQSERYGF+EFNSH
Sbjct: 84  IQSSGEDNKTIWIGDLQQWMDEGYLQSCFSQTGEVVSVKIIRNKQTGQSERYGFIEFNSH 143


>gb|PIN12328.1| Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM
           superfamily) [Handroanthus impetiginosus]
          Length = 394

 Score =  115 bits (289), Expect = 4e-28
 Identities = 53/60 (88%), Positives = 57/60 (95%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDN+TIWIGDLQQWMDE+Y+QSCFSQTGEV SVKIIRNK TGQSERYGFVEFNSH
Sbjct: 71  IQSSGEDNRTIWIGDLQQWMDESYVQSCFSQTGEVVSVKIIRNKQTGQSERYGFVEFNSH 130


>gb|PIN20448.1| Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM
           superfamily) [Handroanthus impetiginosus]
          Length = 419

 Score =  115 bits (288), Expect = 8e-28
 Identities = 53/60 (88%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ S EDNKTIWIGDLQQWMDE YLQSCFSQ+GEV SVKIIRNK TGQSERYGF+EFNSH
Sbjct: 80  IQGSGEDNKTIWIGDLQQWMDEGYLQSCFSQSGEVVSVKIIRNKQTGQSERYGFIEFNSH 139


>ref|XP_022897109.1| polyadenylate-binding protein RBP47-like isoform X4 [Olea europaea
           var. sylvestris]
          Length = 362

 Score =  114 bits (285), Expect = 1e-27
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ S EDNKTIWIGDLQQWMDE YLQSCFS+TGEV SVK+IRNKHTGQS+RYGF+EF SH
Sbjct: 72  IQISSEDNKTIWIGDLQQWMDETYLQSCFSETGEVVSVKVIRNKHTGQSDRYGFIEFRSH 131


>ref|XP_015060188.1| PREDICTED: polyadenylate-binding protein RBP47 [Solanum pennellii]
          Length = 411

 Score =  115 bits (287), Expect = 1e-27
 Identities = 53/60 (88%), Positives = 54/60 (90%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQNS EDNKTIWIGDLQQWMDE+YL SCFS  GEV SVKIIRNK TGQSERYGFVEFNSH
Sbjct: 66  IQNSSEDNKTIWIGDLQQWMDESYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNSH 125


>ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP47 [Solanum
           lycopersicum]
          Length = 413

 Score =  115 bits (287), Expect = 1e-27
 Identities = 53/60 (88%), Positives = 54/60 (90%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQNS EDNKTIWIGDLQQWMDE+YL SCFS  GEV SVKIIRNK TGQSERYGFVEFNSH
Sbjct: 68  IQNSSEDNKTIWIGDLQQWMDESYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNSH 127


>ref|XP_022897108.1| polyadenylate-binding protein RBP47-like isoform X3 [Olea europaea
           var. sylvestris]
          Length = 367

 Score =  114 bits (285), Expect = 1e-27
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ S EDNKTIWIGDLQQWMDE YLQSCFS+TGEV SVK+IRNKHTGQS+RYGF+EF SH
Sbjct: 72  IQISSEDNKTIWIGDLQQWMDETYLQSCFSETGEVVSVKVIRNKHTGQSDRYGFIEFRSH 131


>ref|XP_022897107.1| polyadenylate-binding protein RBP47-like isoform X2 [Olea europaea
           var. sylvestris]
          Length = 404

 Score =  114 bits (285), Expect = 2e-27
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ S EDNKTIWIGDLQQWMDE YLQSCFS+TGEV SVK+IRNKHTGQS+RYGF+EF SH
Sbjct: 72  IQISSEDNKTIWIGDLQQWMDETYLQSCFSETGEVVSVKVIRNKHTGQSDRYGFIEFRSH 131


>ref|XP_012831045.1| PREDICTED: polyadenylate-binding protein RBP47-like [Erythranthe
           guttata]
 gb|EYU42664.1| hypothetical protein MIMGU_mgv1a008163mg [Erythranthe guttata]
          Length = 383

 Score =  114 bits (284), Expect = 2e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQNS EDNKTIWIGDLQQWMDE YLQ+CFS +GEV SVKIIRNKHTGQSERYGF+EF SH
Sbjct: 71  IQNSGEDNKTIWIGDLQQWMDEGYLQTCFSPSGEVHSVKIIRNKHTGQSERYGFIEFVSH 130


>ref|XP_022897106.1| polyadenylate-binding protein RBP47-like isoform X1 [Olea europaea
           var. sylvestris]
          Length = 409

 Score =  114 bits (285), Expect = 2e-27
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ S EDNKTIWIGDLQQWMDE YLQSCFS+TGEV SVK+IRNKHTGQS+RYGF+EF SH
Sbjct: 72  IQISSEDNKTIWIGDLQQWMDETYLQSCFSETGEVVSVKVIRNKHTGQSDRYGFIEFRSH 131


>ref|XP_009794615.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X1
           [Nicotiana sylvestris]
          Length = 402

 Score =  114 bits (284), Expect = 3e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE+YL SCFSQ GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 50  IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 109


>ref|XP_011092727.1| polyadenylate-binding protein RBP47-like isoform X2 [Sesamum
           indicum]
          Length = 387

 Score =  113 bits (283), Expect = 3e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE YL +CFSQTGEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 73  IQSSGEDNKTIWIGDLQQWMDEGYLHACFSQTGEVVSVKIIRNKQTGQSERYGFVEFNTH 132


>ref|NP_001312351.1| polyadenylate-binding protein RBP47-like [Nicotiana tabacum]
 gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  114 bits (284), Expect = 3e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE+YL SCFSQ GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 76  IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 135


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
           Short=Poly(A)-binding protein RBP47; AltName:
           Full=RNA-binding protein 47; Short=NplRBP47
 emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
          Length = 428

 Score =  114 bits (284), Expect = 3e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE+YL SCFSQ GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 76  IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 135


>ref|XP_019230881.1| PREDICTED: polyadenylate-binding protein RBP47 [Nicotiana
           attenuata]
 gb|OIT29124.1| polyadenylate-binding protein rbp47 [Nicotiana attenuata]
          Length = 429

 Score =  114 bits (284), Expect = 3e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE+YL SCFSQ GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 77  IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 136


>ref|XP_009590296.1| PREDICTED: polyadenylate-binding protein RBP47 [Nicotiana
           tomentosiformis]
          Length = 430

 Score =  114 bits (284), Expect = 4e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE+YL SCFSQ GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 78  IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 137


>ref|XP_009794616.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X2
           [Nicotiana sylvestris]
          Length = 431

 Score =  114 bits (284), Expect = 4e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE+YL SCFSQ GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 79  IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 138


>ref|XP_011092726.1| polyadenylate-binding protein RBP47-like isoform X1 [Sesamum
           indicum]
          Length = 403

 Score =  113 bits (283), Expect = 4e-27
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDNKTIWIGDLQQWMDE YL +CFSQTGEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 73  IQSSGEDNKTIWIGDLQQWMDEGYLHACFSQTGEVVSVKIIRNKQTGQSERYGFVEFNTH 132


>gb|KZV54012.1| hypothetical protein F511_40647 [Dorcoceras hygrometricum]
          Length = 415

 Score =  113 bits (283), Expect = 4e-27
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQ+S EDN+TIWIGDLQQWMD+ YLQSCFSQTGEV SVKIIRNK TGQSERYGFVEF+SH
Sbjct: 75  IQSSGEDNRTIWIGDLQQWMDDGYLQSCFSQTGEVVSVKIIRNKQTGQSERYGFVEFSSH 134


>ref|NP_001275480.1| DNA binding protein ACBF-like [Solanum tuberosum]
 gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
          Length = 372

 Score =  112 bits (281), Expect = 5e-27
 Identities = 52/60 (86%), Positives = 53/60 (88%)
 Frame = -3

Query: 180 IQNSDEDNKTIWIGDLQQWMDEAYLQSCFSQTGEVFSVKIIRNKHTGQSERYGFVEFNSH 1
           IQNS EDNKTIWIGDLQQWMDE YL SCFS  GEV SVKIIRNK TGQSERYGFVEFN+H
Sbjct: 25  IQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTH 84


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