BLASTX nr result

ID: Rehmannia30_contig00003644 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00003644
         (589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011093323.1| nuclear transcription factor Y subunit A-1-l...    77   2e-13
emb|CAM12541.1| YA3 [Antirrhinum majus]                                64   6e-09
ref|XP_022896618.1| nuclear transcription factor Y subunit A-4-l...    62   6e-08
ref|XP_022896613.1| nuclear transcription factor Y subunit A-4-l...    62   6e-08

>ref|XP_011093323.1| nuclear transcription factor Y subunit A-1-like [Sesamum indicum]
 ref|XP_011093324.1| nuclear transcription factor Y subunit A-1-like [Sesamum indicum]
          Length = 310

 Score = 77.4 bits (189), Expect = 2e-13
 Identities = 46/92 (50%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
 Frame = -3

Query: 563 SGEINSTQSCSSASAHLSTNGNNTVSNHQNDGASMVEEIHR-------------LGLYYT 423
           SGEI  TQS S ASAHLS N NN +SN Q +GAS ++  H+             L LYY 
Sbjct: 220 SGEITHTQSSSPASAHLSYNRNN-ISNQQGNGASTIQGTHKKQNLPNGFSHGNGLALYYA 278

Query: 422 QSSRRDPRNGHFSEDNWNSLANRAPLGSSSSK 327
            S+RRD  N HFSEDN  SL + AP G S  K
Sbjct: 279 DSTRRDLENDHFSEDNRTSLVSTAPQGPSFRK 310


>emb|CAM12541.1| YA3 [Antirrhinum majus]
          Length = 257

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 41/89 (46%), Positives = 46/89 (51%), Gaps = 18/89 (20%)
 Frame = -3

Query: 581 NAKNSGSGE------INSTQSCSSASAHLSTNGNNTVSNHQNDGASMVEEIHR------- 441
           N KNS SGE        STQS SSASA  S+N NN  S  + DG S V+E+H        
Sbjct: 165 NEKNSSSGEQLYSGAAPSTQSYSSASAQSSSN-NNATSGQREDGTSTVQEMHNDPRMFSN 223

Query: 440 -----LGLYYTQSSRRDPRNGHFSEDNWN 369
                +  YY  S RR   NGH SEDNWN
Sbjct: 224 GNNNGVSFYYPTSPRRGTGNGHTSEDNWN 252


>ref|XP_022896618.1| nuclear transcription factor Y subunit A-4-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 297

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 14/100 (14%)
 Frame = -3

Query: 584 DNAKNSGSGEINSTQSC-SSASAHLSTNGNNTVSNHQNDGASMVEEIHR----------- 441
           ++ + S SG    TQSC SS S HLS+NG+  +S+ + DG SMV   H+           
Sbjct: 199 NSTEQSKSGSTVPTQSCNSSVSEHLSSNGDG-ISDKRGDGGSMVLNSHKEQSLPNGNSDG 257

Query: 440 --LGLYYTQSSRRDPRNGHFSEDNWNSLANRAPLGSSSSK 327
             L  Y TQS+R +  +GH ++D+W+ L N+ P G   +K
Sbjct: 258 HALFFYLTQSTRNEQPSGHINQDHWSLLVNQVPHGVGPTK 297


>ref|XP_022896613.1| nuclear transcription factor Y subunit A-4-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022896615.1| nuclear transcription factor Y subunit A-4-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022896616.1| nuclear transcription factor Y subunit A-4-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022896617.1| nuclear transcription factor Y subunit A-4-like isoform X1 [Olea
           europaea var. sylvestris]
          Length = 298

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 14/100 (14%)
 Frame = -3

Query: 584 DNAKNSGSGEINSTQSC-SSASAHLSTNGNNTVSNHQNDGASMVEEIHR----------- 441
           ++ + S SG    TQSC SS S HLS+NG+  +S+ + DG SMV   H+           
Sbjct: 200 NSTEQSKSGSTVPTQSCNSSVSEHLSSNGDG-ISDKRGDGGSMVLNSHKEQSLPNGNSDG 258

Query: 440 --LGLYYTQSSRRDPRNGHFSEDNWNSLANRAPLGSSSSK 327
             L  Y TQS+R +  +GH ++D+W+ L N+ P G   +K
Sbjct: 259 HALFFYLTQSTRNEQPSGHINQDHWSLLVNQVPHGVGPTK 298


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