BLASTX nr result

ID: Rehmannia30_contig00003143 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00003143
         (568 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV88228.1| hypothetical protein CFOL_v3_31651 [Cephalotus f...    57   4e-06

>dbj|GAV88228.1| hypothetical protein CFOL_v3_31651 [Cephalotus follicularis]
          Length = 468

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/98 (41%), Positives = 46/98 (46%), Gaps = 23/98 (23%)
 Frame = +1

Query: 193 FTSPPHHHQNIHLLHITINPH--------------LHHPSYRHLH--IFINLRPFHLHPH 324
           FT+P HHH + HLLH++ N H              LHH   RHLH     NL   H H H
Sbjct: 46  FTNPHHHHLHHHLLHMSTNLHRHRLHHLLLLMSINLHHLLLRHLHHLTSTNLHHLHHHHH 105

Query: 325 LHTITISRPLLPLHLLDQYITI-----HHL--LLHPAT 417
           LH I  S   L LH L   I I     HHL  LLH +T
Sbjct: 106 LHPIFTSHHHLLLHFLLPLIYINHHHPHHLHHLLHMST 143


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