BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00003122
         (1054 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 ...   447   e-152
ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 ...   447   e-151
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   414   e-138
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   310   8e-99
ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europ...   308   3e-97
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   257   2e-77
ref|XP_019175901.1| PREDICTED: RNA polymerase sigma factor sigC-...   253   7e-76
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   249   4e-74
ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-...   248   1e-73
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   248   1e-73
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   246   3e-73
ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC ...   245   7e-73
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ...   243   4e-72
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ...   241   2e-71
ref|XP_017983625.1| PREDICTED: RNA polymerase sigma factor sigC ...   239   1e-70
ref|XP_023891394.1| RNA polymerase sigma factor sigC [Quercus su...   239   2e-70
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   238   6e-70
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   237   8e-70
ref|XP_019184937.1| PREDICTED: RNA polymerase sigma factor sigC-...   237   9e-70
ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC ...   235   4e-69

>ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum]
          Length = 556

 Score =  447 bits (1151), Expect = e-152
 Identities = 237/328 (72%), Positives = 264/328 (80%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETLNDTS 248
            MGFRLNLKW G                   CRGRD+SY L RLSA+S+LYGE ETLND S
Sbjct: 1    MGFRLNLKWSGLSVQSPFSTSTSSLPYTYPCRGRDTSYILARLSASSVLYGETETLNDAS 60

Query: 249  RAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQAT 428
            R HVCSSSPQLLENYYLGTRE+KVA+GKGSSDGL SLL+  I+TSN++DKLAYLTSLQAT
Sbjct: 61   RVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQAT 120

Query: 429  QASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDL 608
            Q SQF+LLMKNLD+LEDMFSDSN VRLERDILEQLERLGALRLF+SCLSRTLKSS S DL
Sbjct: 121  QLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDL 180

Query: 609  SNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISR 788
            SNA  E+VEE +VNDSVDNHV +V ++SG                  I+ QELP+ TIS+
Sbjct: 181  SNATTELVEEPKVNDSVDNHVGEV-VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK 239

Query: 789  DFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSW 968
               Q K AS RR SRSRNKRQ+IARNEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSW
Sbjct: 240  ---QHKYASARRASRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSW 296

Query: 969  AEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            AEAAGIKKKELQQ+L+YGWHCRDELLRS
Sbjct: 297  AEAAGIKKKELQQNLHYGWHCRDELLRS 324


>ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum]
          Length = 578

 Score =  447 bits (1151), Expect = e-151
 Identities = 237/328 (72%), Positives = 264/328 (80%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETLNDTS 248
            MGFRLNLKW G                   CRGRD+SY L RLSA+S+LYGE ETLND S
Sbjct: 1    MGFRLNLKWSGLSVQSPFSTSTSSLPYTYPCRGRDTSYILARLSASSVLYGETETLNDAS 60

Query: 249  RAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQAT 428
            R HVCSSSPQLLENYYLGTRE+KVA+GKGSSDGL SLL+  I+TSN++DKLAYLTSLQAT
Sbjct: 61   RVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQAT 120

Query: 429  QASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDL 608
            Q SQF+LLMKNLD+LEDMFSDSN VRLERDILEQLERLGALRLF+SCLSRTLKSS S DL
Sbjct: 121  QLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDL 180

Query: 609  SNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISR 788
            SNA  E+VEE +VNDSVDNHV +V ++SG                  I+ QELP+ TIS+
Sbjct: 181  SNATTELVEEPKVNDSVDNHVGEV-VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK 239

Query: 789  DFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSW 968
               Q K AS RR SRSRNKRQ+IARNEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSW
Sbjct: 240  ---QHKYASARRASRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSW 296

Query: 969  AEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            AEAAGIKKKELQQ+L+YGWHCRDELLRS
Sbjct: 297  AEAAGIKKKELQQNLHYGWHCRDELLRS 324


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttata]
          Length = 562

 Score =  414 bits (1063), Expect = e-138
 Identities = 226/331 (68%), Positives = 253/331 (76%), Gaps = 3/331 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETLNDTS 248
            MGFRLNL W G                   CRGRDSSYFL R SAAS++YG+ ETLNDTS
Sbjct: 1    MGFRLNLNWCGLSVQSPLSTSTSSWPTSSSCRGRDSSYFLARSSAASVIYGDTETLNDTS 60

Query: 249  RA-HVCSSSPQLLENYYLG-TRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 422
            R  HV  SS QLLENYYLG  ++ KVALGKGSSD LYSLLD+DIQ   N+DKL  LTS+Q
Sbjct: 61   RGIHVYPSSHQLLENYYLGGAKQLKVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQ 120

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
            ATQAS+ +LLMKNLD+LEDMF+DSNAVRLE DILEQLERLGALRLFHSCLSRT+KS  S 
Sbjct: 121  ATQASKLRLLMKNLDVLEDMFADSNAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSF 180

Query: 603  DLSNAPVEIVEE-RRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSET 779
            DLS+ P EIVEE  RVNDSVDNH+ KVF+ SG                 + ++QE PS+T
Sbjct: 181  DLSDGPTEIVEECARVNDSVDNHLGKVFVHSG-KKELRKLRRKRTSDNESPTIQESPSKT 239

Query: 780  ISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASL 959
            IS+D QQ K A   RT RSRNKRQK ARNEA+MS+GVK VAELEK+RT LE+ETGQIASL
Sbjct: 240  ISKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASL 299

Query: 960  SSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            S+WAEAAGIKKKELQQHL+YGWHCRDELLRS
Sbjct: 300  SNWAEAAGIKKKELQQHLHYGWHCRDELLRS 330


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  310 bits (793), Expect = 8e-99
 Identities = 169/246 (68%), Positives = 191/246 (77%)
 Frame = +3

Query: 315  KVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDS 494
            +VALGKGSSD LYSLLD+DIQ   N+DKL  LTS+QATQAS+ +LLMKNLD+LEDMF+DS
Sbjct: 13   QVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADS 72

Query: 495  NAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVS 674
            NAVRLE DILEQLERLGALRLFHSCLSRT+KS  S DLS+ P EIVEE            
Sbjct: 73   NAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEE-----------C 121

Query: 675  KVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQK 854
            KVF+ SG                 + ++QE PS+TIS+D QQ K A   RT RSRNKRQK
Sbjct: 122  KVFVHSG-KKELRKLRRKRTSDNESPTIQESPSKTISKDLQQLKFAIAGRTPRSRNKRQK 180

Query: 855  IARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCR 1034
             ARNEA+MS+GVK VAELEK+RT LE+ETGQIASLS+WAEAAGIKKKELQQHL+YGWHCR
Sbjct: 181  TARNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCR 240

Query: 1035 DELLRS 1052
            DELLRS
Sbjct: 241  DELLRS 246


>ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europaea var. sylvestris]
          Length = 558

 Score =  308 bits (789), Expect = 3e-97
 Identities = 170/330 (51%), Positives = 219/330 (66%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXX-CRGRD-SSYFLMRLSAASILYGEAETLND 242
            MGFRL+ KW                      CRG+   S +L +L   S++YGE E L D
Sbjct: 1    MGFRLDFKWRSLSVQSLLSTSSSSSLPSSYSCRGKGRESTYLTKLPITSVVYGETEALID 60

Query: 243  TSRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 422
                  C +SPQ+LE+ Y G +E K+  GK S +GLYSL D++IQ S  +DKL +L SLQ
Sbjct: 61   PLGPRTCLTSPQILEDNYFGNKEIKMDPGKQSRNGLYSLSDDNIQMSAEEDKLPFLISLQ 120

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
            AT+AS F LLMKNLD LE MFSDS+ + LERDIL+QL+RLGALRLFH+CLSR LKSS  +
Sbjct: 121  ATEASHFSLLMKNLDKLEKMFSDSDVITLERDILQQLKRLGALRLFHTCLSRALKSSTLL 180

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
            DLS+ P+E+VEE R+N+ V +H  KV +QSG                   S+ E  S+TI
Sbjct: 181  DLSDGPMELVEETRINEPVTDHEGKVVVQSGKKEQRRLRRKRALEKGNDSSMLEFSSKTI 240

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
              +    K++S RR   +R K+ KI +NEAEMS+GVK+VA+LEK+RT+LEEETGQ+ SL+
Sbjct: 241  PGN----KISSRRRHLITRKKKLKITKNEAEMSSGVKLVADLEKVRTMLEEETGQVGSLN 296

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            SWAEAA ++KK LQQ L++GW CRDELLRS
Sbjct: 297  SWAEAARVEKKTLQQRLHHGWQCRDELLRS 326


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
 emb|CBI20603.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  257 bits (656), Expect = 2e-77
 Identities = 152/330 (46%), Positives = 200/330 (60%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETL-NDT 245
            MGFRLNLKW                      +G+++S+   R S  S+   + E+L  D 
Sbjct: 3    MGFRLNLKWD-FPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKDP 61

Query: 246  SRAHVCSSSP-QLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 422
             +   CSS   Q  EN Y      K+ +GK S   L+ ++ N  Q    +D  A +  LQ
Sbjct: 62   FKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIV-NASQAPIGEDISASVAGLQ 120

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
            A++ASQF LL++NLDILE+MF+DSN VRLERDI+ QL RLGAL+LF  CLSRTLK+S S 
Sbjct: 121  ASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSF 180

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
            DL +AP E + E + N +VD+H+ KV ++SG                  I    LPS+TI
Sbjct: 181  DLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTI 240

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
             +   +P V++ +RT  SR KR   A+NEAEMS GVK+VA LE++R  LEEE G +ASLS
Sbjct: 241  RKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLS 300

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            +WAEAAG+ KK LQQ L +GW+CRDELLRS
Sbjct: 301  NWAEAAGVDKKVLQQQLQFGWYCRDELLRS 330


>ref|XP_019175901.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1 [Ipomoea
            nil]
          Length = 553

 Score =  253 bits (645), Expect = 7e-76
 Identities = 144/328 (43%), Positives = 204/328 (62%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETLNDTS 248
            MGFRL LKWG                     +GR++ Y  +R S + I      + +D  
Sbjct: 1    MGFRLPLKWGLSVQPPFSTKSSSYWLSSNSFKGRETLYNSLRTSPSFINGENDASHSDPL 60

Query: 249  RAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQAT 428
            +   C S  Q  EN    T E K+ +G+GS  GLY+   N++  S  +DKL +L S   +
Sbjct: 61   KVWTCLSDAQHCENDDSLT-EVKMGIGRGSQSGLYTRTCNNVDMSVQEDKLPFLES---S 116

Query: 429  QASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDL 608
            +A  F  LM+NL++LE +F+DS+ VRLERDIL QLER+GAL LFH+CL RTLKSS S +L
Sbjct: 117  KAKHFGFLMQNLEMLEHIFADSDGVRLERDILVQLERIGALELFHTCLERTLKSSTSSNL 176

Query: 609  SNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETISR 788
            ++ P+E+VEE + +  V+ +V K F+ SG                  + ++ LP      
Sbjct: 177  TDVPIELVEEIQEDGLVNVNVDKSFVSSGKRQERESRRKRQPKNTRGVKVELLPKRF--E 234

Query: 789  DFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSW 968
            D +QPK++S ++   SRN+RQ IA+NE EMS G+K+VAELE+LR++LEEETG++AS S+W
Sbjct: 235  DPRQPKLSSGKKLGNSRNRRQSIAKNEIEMSIGIKVVAELERLRSVLEEETGRVASSSAW 294

Query: 969  AEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            A+AAG+ +K LQQ L++GW+CRDELLRS
Sbjct: 295  AKAAGLSQKILQQRLHFGWYCRDELLRS 322


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  249 bits (637), Expect = 4e-74
 Identities = 143/299 (47%), Positives = 191/299 (63%), Gaps = 2/299 (0%)
 Frame = +3

Query: 162  RGRDSSYFLMRLSAASILYGEAETL-NDTSRAHVCSSSP-QLLENYYLGTRESKVALGKG 335
            +G+++S+   R S  S+   + E+L  D  +   CSS   Q  EN Y      K+ +GK 
Sbjct: 83   QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142

Query: 336  SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 515
            S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN VRLER
Sbjct: 143  SHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201

Query: 516  DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSG 695
            DI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV ++SG
Sbjct: 202  DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSG 261

Query: 696  XXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAE 875
                              I    LPS+TI +   +P V++ +RT  SR KR   A+NEAE
Sbjct: 262  KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 321

Query: 876  MSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            MS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDELLRS
Sbjct: 322  MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRS 380


>ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-like [Nicotiana tabacum]
          Length = 572

 Score =  248 bits (632), Expect = 1e-73
 Identities = 148/347 (42%), Positives = 196/347 (56%), Gaps = 3/347 (0%)
 Frame = +3

Query: 21   HFAFPLFLAFKKQFLLMGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLS 200
            H  F +FL   +  L MGFRL LKWG                     +G+++ Y   R  
Sbjct: 2    HIKFQVFLLHSQNLLAMGFRLYLKWG-FSVQPPFSSNSSSWPSSHSLKGKEALYDPARSL 60

Query: 201  AASILYGEAETLNDTSRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLD---ND 371
               I      + +D  R   C S PQL  +    T E K  +G+GS   +Y  +    N 
Sbjct: 61   KPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNG 120

Query: 372  IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGAL 551
            I     K      T L  T+A  F LLMKNLD+LE+MF+DS   RLERDI+ QL++LGAL
Sbjct: 121  ITLDGEKP-----TYLNTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGAL 175

Query: 552  RLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXX 731
              FH+CLSRT   S   ++ + P E++EE   +  V N + KV ++S             
Sbjct: 176  EFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRA 235

Query: 732  XXXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELE 911
                  I   +  ++ I  D QQPK  S +RT  SRNKRQKIA+NEAEMS GVK+VAELE
Sbjct: 236  SRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELE 295

Query: 912  KLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            ++R+ILEEETG++AS SSWAEAAG+++KELQQ L++GW+CRDELL+S
Sbjct: 296  RIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKS 342


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  248 bits (632), Expect = 1e-73
 Identities = 149/346 (43%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
 Frame = +3

Query: 21   HFAFPLFLAFKKQFLLMGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLS 200
            H  F +FL   +  L MGFRL LKWG                     +G+++ Y   R  
Sbjct: 2    HIKFQVFLLHSQNLLAMGFRLYLKWG-FSVQPPFSSNSSSWPSSHSFKGKEALYDPARSL 60

Query: 201  AASILYGEAETLNDTSRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQT 380
               I      + +D  R   C S PQL  +    T E K  +G+GS   +Y     DI +
Sbjct: 61   KPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYG----DIGS 116

Query: 381  SNNKDKL--AYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALR 554
              N   L     T L  T+A  F LLMKNLD+LE+MF+DS   RLERDI+ QL++LGAL 
Sbjct: 117  PKNVISLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALE 176

Query: 555  LFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXX 734
             FH+CLSRT   S   ++ + P E++EE   +  V N + KV ++S              
Sbjct: 177  FFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRAS 236

Query: 735  XXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 914
                 I   +  ++ I  D QQPK  S +RT  SRNKRQKIA+NEAEMS GVK+VAELE+
Sbjct: 237  RNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELER 296

Query: 915  LRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            +R+ILEEETG++AS SSWAEAAG+++KELQQ L++GW+CRDELL+S
Sbjct: 297  IRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKS 342


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
 ref|XP_016482950.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
            [Nicotiana tabacum]
          Length = 554

 Score =  246 bits (627), Expect = 3e-73
 Identities = 149/330 (45%), Positives = 201/330 (60%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAE-TLNDT 245
            MGFRL+LKWG                     +G+++ Y   R S    + G+ E + +D 
Sbjct: 1    MGFRLHLKWG-FSVQPPFSSNSSAWPSSHSFKGKEALYDPAR-SLKPFINGDCEPSHSDP 58

Query: 246  SRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQ 422
             R   C S PQL  +    T E K  +G+GS   +Y  + +D    S + +K +YL++  
Sbjct: 59   FRVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKTGISPDGEKPSYLST-- 116

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
             T+A  F LLMKN+D+LE+MF+DS   RLE DIL QLE+LGAL  FHS LSRTL S+ S 
Sbjct: 117  -TRAPHFSLLMKNIDLLENMFADSEMSRLENDILVQLEKLGALEFFHSRLSRTLHST-SP 174

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
            ++ + P E+VEE   +D V N + KV ++S                   I      ++ I
Sbjct: 175  EVLDVPRELVEEIEKDDLVGNGIDKVVVRSRKKQERNSRRNRASGIANDIITVHPHTKNI 234

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
              D QQPK  S +RT  SRNKRQKIA+NEAEMS GVK+VAELE++R+ILEEETG++AS S
Sbjct: 235  QEDMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFS 294

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            SWAEAAG+++KELQ HL++GW+CRDELL+S
Sbjct: 295  SWAEAAGVEQKELQHHLHFGWYCRDELLKS 324


>ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana attenuata]
 gb|OIT36910.1| rna polymerase sigma factor sigc [Nicotiana attenuata]
          Length = 555

 Score =  245 bits (625), Expect = 7e-73
 Identities = 146/330 (44%), Positives = 200/330 (60%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAE-TLNDT 245
            MGFRL+LKWG                     +G+++ Y   R S    + G+ E + +D 
Sbjct: 1    MGFRLHLKWGFSVQPPFSPNSASAWPSSHSFKGKEALYDPAR-SLKPFINGDCEPSHSDP 59

Query: 246  SRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQ 422
             R   C S PQL  +    T E K  +G+GS   +Y  + +D I  S + +K  YL +  
Sbjct: 60   FRVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKIGISPDGEKPLYLNT-- 117

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
             T+A  F LLMKN+D+LE+MF+DS   RLE +IL QLE+LGAL  FHS LSRTL S+   
Sbjct: 118  -TRAPHFSLLMKNIDLLENMFADSEMSRLENNILVQLEKLGALEFFHSRLSRTLHSTFP- 175

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
            ++ + P +++EE   +D V N ++KV ++S                   I      ++ I
Sbjct: 176  EVLDVPRDLIEEIEKDDLVGNGINKVVVRSRKKQERKSRRNRASGIANDIITVHPHTKNI 235

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
              D QQPK  S +RT  SRNKRQKIA+NEAEMS GVK+VAELE++R+ILEEETG++AS S
Sbjct: 236  QEDMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFS 295

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            SWAEAAG+++KELQ HL++GW+CRDELL+S
Sbjct: 296  SWAEAAGVEQKELQHHLHFGWYCRDELLKS 325


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            tuberosum]
          Length = 555

 Score =  243 bits (620), Expect = 4e-72
 Identities = 147/330 (44%), Positives = 198/330 (60%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAE-TLNDT 245
            MGFRL+LKWG                     +GR++ Y   R S    + G+ E + +D 
Sbjct: 1    MGFRLHLKWG-FSVQPPFSSNSSSWPSSHSFKGREALYDPAR-SLKPFITGDCEPSHSDP 58

Query: 246  SRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQ 422
             R   C S PQL  +    T E K   G+GS   +Y  +  + I  S + +K  YL +  
Sbjct: 59   FRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNT-- 116

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
             T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  SS   
Sbjct: 117  -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP 175

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
             + + P E+++E   +D V N + KV ++S                   I   +  ++ I
Sbjct: 176  KVLDVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNI 235

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
              D QQPK  S +RT  SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ S
Sbjct: 236  QEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFS 295

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            SWAEAAGI++KELQQ L++GW+CRDELL+S
Sbjct: 296  SWAEAAGIEQKELQQRLHFGWYCRDELLKS 325


>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score =  241 bits (615), Expect = 2e-71
 Identities = 147/330 (44%), Positives = 199/330 (60%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAE-TLNDT 245
            MGFRL+LKWG                     +GR++ Y   R S    + G+ E + +D 
Sbjct: 1    MGFRLHLKWG-FSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDP 58

Query: 246  SRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSN-NKDKLAYLTSLQ 422
             R   C S PQL  +    T E+K   G+GS   +Y     DI +   + +K  Y+ +  
Sbjct: 59   FRVQTCLSDPQLWTSDASVTIETKTRNGRGSPSNVYG----DIGSYKIDGEKPTYINT-- 112

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
             T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  SS   
Sbjct: 113  -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP 171

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
             + + P E+++E   +D V N + KV ++S                   I   +  ++ I
Sbjct: 172  KVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNI 231

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
              D QQPK  S +RT  SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ S
Sbjct: 232  QEDLQQPKFYSGKRTHASRNKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGRVATFS 291

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            SWAEAAGI++KELQQHL++GW+CRDELL+S
Sbjct: 292  SWAEAAGIEQKELQQHLHFGWYCRDELLKS 321


>ref|XP_017983625.1| PREDICTED: RNA polymerase sigma factor sigC [Theobroma cacao]
 ref|XP_017983626.1| PREDICTED: RNA polymerase sigma factor sigC [Theobroma cacao]
          Length = 536

 Score =  239 bits (609), Expect = 1e-70
 Identities = 141/288 (48%), Positives = 186/288 (64%), Gaps = 1/288 (0%)
 Frame = +3

Query: 192  RLSAASILYGEAETLNDTSRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDND 371
            RL ++ +L     +L D  +A+  S++PQ LE   L   E KV +GKGS    +SL   D
Sbjct: 24   RLPSSGVL-----SLKDPLKAYASSAAPQTLEKGCLEIEEMKVNIGKGSQSHSHSLTMID 78

Query: 372  -IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGA 548
                    DK +  TS QA +AS + LLM+NLD+LE+ F+DS+ + LER+IL QL RLGA
Sbjct: 79   KTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRLGA 138

Query: 549  LRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXX 728
            L+LF++CLSRTLK+S+ +DLS+ P     +  +N SVD    K  + S            
Sbjct: 139  LKLFNTCLSRTLKASNILDLSDVPANS-GDCNMNLSVDGQKDKTVVCSRKKKQRKKIRER 197

Query: 729  XXXXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAEL 908
                   IS Q LPS T+   FQ+PKV+S +R S SR++R +IARNEAEMS GVK+VA L
Sbjct: 198  ALENPTIISTQLLPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANL 257

Query: 909  EKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            E++RT LEEETG+ ASLS WAEAAG+ +K LQQHL +GW+CRDELLRS
Sbjct: 258  ERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRS 305


>ref|XP_023891394.1| RNA polymerase sigma factor sigC [Quercus suber]
 gb|POE61975.1| rna polymerase sigma factor sigc [Quercus suber]
          Length = 572

 Score =  239 bits (610), Expect = 2e-70
 Identities = 140/340 (41%), Positives = 203/340 (59%), Gaps = 13/340 (3%)
 Frame = +3

Query: 72   GFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETL-NDTS 248
            GFRLNLKWG                     RG+++S  L R S  S++  E+ET   D  
Sbjct: 4    GFRLNLKWG-FPIQSHSLTNSPSRLSSSYVRGKEASLNLTRQSFVSVISEESETFYKDPL 62

Query: 249  RAHVCSSS-PQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQA 425
            +A +CS++ P   EN +    + K  + K S   L +L+D D Q    + K    TSLQ 
Sbjct: 63   KADICSAAAPLFTENNFSEVEDMKKNIRKRSYSSLRNLID-DTQVPVEEGKFTSCTSLQG 121

Query: 426  TQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSID 605
             + + F LL++NL +LE+ F DS+ +RLERDI++QL RLGA+ LF++CLSRT+++S+ +D
Sbjct: 122  GKEANFNLLIENLHVLEETFVDSDVLRLERDIMQQLGRLGAINLFNTCLSRTVQNSNLLD 181

Query: 606  LSNAPVEIVE-----------ERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAI 752
            LS+ P +  E           E  +    D+ + KV ++S                    
Sbjct: 182  LSDIPTDYTEHEKKSKTDEHAEDEMKGKTDDCIGKVVVRSRKKRGRKSRGKKTLENACET 241

Query: 753  SLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILE 932
            SL  LPS+ I + F QP V+S +R S SR++R KI+RNEAEMSTGVK+VA LE++R  LE
Sbjct: 242  SLLLLPSKIIQQRFGQPNVSSAKRASSSRSRRLKISRNEAEMSTGVKVVANLERIRRTLE 301

Query: 933  EETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            EETG++A++S WAEAAG+ +K LQQ+L++GW+CRDE++RS
Sbjct: 302  EETGRVATISCWAEAAGLDEKVLQQNLHFGWYCRDEIIRS 341


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            sylvestris]
 ref|XP_016482949.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
            [Nicotiana tabacum]
          Length = 584

 Score =  238 bits (607), Expect = 6e-70
 Identities = 140/299 (46%), Positives = 191/299 (63%), Gaps = 2/299 (0%)
 Frame = +3

Query: 162  RGRDSSYFLMRLSAASILYGEAE-TLNDTSRAHVCSSSPQLLENYYLGTRESKVALGKGS 338
            +G+++ Y   R S    + G+ E + +D  R   C S PQL  +    T E K  +G+GS
Sbjct: 61   KGKEALYDPAR-SLKPFINGDCEPSHSDPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGS 119

Query: 339  SDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 515
               +Y  + +D    S + +K +YL++   T+A  F LLMKN+D+LE+MF+DS   RLE 
Sbjct: 120  PSNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEMSRLEN 176

Query: 516  DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSG 695
            DIL QLE+LGAL  FHS LSRTL S+ S ++ + P E+VEE   +D V N + KV ++S 
Sbjct: 177  DILVQLEKLGALEFFHSRLSRTLHST-SPEVLDVPRELVEEIEKDDLVGNGIDKVVVRSR 235

Query: 696  XXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAE 875
                              I      ++ I  D QQPK  S +RT  SRNKRQKIA+NEAE
Sbjct: 236  KKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIAKNEAE 295

Query: 876  MSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            MS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDELL+S
Sbjct: 296  MSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDELLKS 354


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            lycopersicum]
          Length = 551

 Score =  237 bits (604), Expect = 8e-70
 Identities = 146/330 (44%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
 Frame = +3

Query: 69   MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAE-TLNDT 245
            MGFRL+LKWG                     +GR++ Y   R S    + G+ E + +D 
Sbjct: 1    MGFRLHLKWG-FSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDP 58

Query: 246  SRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSN-NKDKLAYLTSLQ 422
             R   C S PQL  +    T E+K   G+GS   +Y     DI +   + +K  YL +  
Sbjct: 59   FRVQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYG----DIGSYKIDGEKPTYLNT-- 112

Query: 423  ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 602
             T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  SS   
Sbjct: 113  -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFP 171

Query: 603  DLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETI 782
             + + P E+++E   +D V N + KV ++S                   I   +  ++ I
Sbjct: 172  KVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNI 231

Query: 783  SRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLS 962
              D QQ K  S +RT  SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+A+ S
Sbjct: 232  QEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFS 291

Query: 963  SWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            SWA+AAGI++KELQQHL++GW+CRDELL+S
Sbjct: 292  SWAKAAGIEQKELQQHLHFGWYCRDELLKS 321


>ref|XP_019184937.1| PREDICTED: RNA polymerase sigma factor sigC-like [Ipomoea nil]
          Length = 555

 Score =  237 bits (604), Expect = 9e-70
 Identities = 140/329 (42%), Positives = 192/329 (58%), Gaps = 1/329 (0%)
 Frame = +3

Query: 69   MGFRLNLKWG-GXXXXXXXXXXXXXXXXXXXCRGRDSSYFLMRLSAASILYGEAETLNDT 245
            MGFRL+L+WG                      +GR+  Y  +  S + + +    +  D 
Sbjct: 1    MGFRLHLRWGLSTHPQIFSFRSSSSWPSSTSLKGREILYDSVGTSPSFMHWENEASHTDP 60

Query: 246  SRAHVCSSSPQLLENYYLGTRESKVALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQA 425
             R   C S  QL EN    T E ++ +G  SS  LY ++ N+ +    +DKL +L S   
Sbjct: 61   FRVRTCLSDRQLRENEISVTAEMEIGVGSHSS--LYDVIGNNREVLTEEDKLKFLKS--- 115

Query: 426  TQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSID 605
            ++  QF LLMKNLD+LE++F+DS  V LERDIL QLERLGAL LF++ LSR  KS    D
Sbjct: 116  SKGKQFSLLMKNLDLLENIFADSCVVGLERDILAQLERLGALELFNTFLSRGQKSFPFSD 175

Query: 606  LSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXXAISLQELPSETIS 785
            L+N P E+V E + ND ++ H++K+ + SG                  +    L  +T  
Sbjct: 176  LTNRPTELVHETQENDLLNIHMNKIVVTSGKKQERELRRRKRSDTNSDVFTLHLQPKTSK 235

Query: 786  RDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSS 965
             + + P ++S +     RN R+KIA +EAEMS GVK+VAELE +RTILEEETG++AS SS
Sbjct: 236  LESKYPNISSGKTWRNFRNTREKIASSEAEMSKGVKVVAELESIRTILEEETGRVASFSS 295

Query: 966  WAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            WAEAAG+ +K LQQ L+YGW+CRDELLRS
Sbjct: 296  WAEAAGLSQKVLQQRLHYGWYCRDELLRS 324


>ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            tuberosum]
          Length = 560

 Score =  235 bits (600), Expect = 4e-69
 Identities = 138/299 (46%), Positives = 188/299 (62%), Gaps = 2/299 (0%)
 Frame = +3

Query: 162  RGRDSSYFLMRLSAASILYGEAE-TLNDTSRAHVCSSSPQLLENYYLGTRESKVALGKGS 338
            +GR++ Y   R S    + G+ E + +D  R   C S PQL  +    T E K   G+GS
Sbjct: 36   KGREALYDPAR-SLKPFITGDCEPSHSDPFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGS 94

Query: 339  SDGLYSLL-DNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 515
               +Y  +  + I  S + +K  YL +   T++  F LLMKNLD+LE+MF+DS   RLER
Sbjct: 95   PSNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMSRLER 151

Query: 516  DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSG 695
            DIL QLE+LGAL  FH+CLSRT  SS    + + P E+++E   +D V N + KV ++S 
Sbjct: 152  DILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVVVRSR 211

Query: 696  XXXXXXXXXXXXXXXXXAISLQELPSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAE 875
                              I   +  ++ I  D QQPK  S +RT  SRNKRQKIA+NEAE
Sbjct: 212  KKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAE 271

Query: 876  MSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRS 1052
            MS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ L++GW+CRDELL+S
Sbjct: 272  MSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDELLKS 330