BLASTX nr result
ID: Rehmannia30_contig00002960
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00002960
(1315 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposo... 542 0.0
dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subt... 519 e-174
gb|KYP52821.1| Copia protein [Cajanus cajan] 491 e-168
gb|KYP58379.1| Retrovirus-related Pol polyprotein from transposo... 467 e-158
gb|KYP41992.1| Retrovirus-related Pol polyprotein from transposo... 457 e-155
gb|KYP65916.1| Retrovirus-related Pol polyprotein from transposo... 452 e-153
gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposo... 461 e-153
ref|XP_019055357.1| PREDICTED: uncharacterized protein LOC109115... 444 e-151
gb|KYP34496.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Ca... 461 e-150
dbj|GAU22794.1| hypothetical protein TSUD_142340 [Trifolium subt... 448 e-147
gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposo... 437 e-146
gb|KYP76948.1| Retrovirus-related Pol polyprotein from transposo... 427 e-144
gb|KHN42845.1| Copia protein, partial [Glycine soja] 422 e-142
gb|KYP43166.1| Retrovirus-related Pol polyprotein from transposo... 416 e-140
gb|KYP53945.1| Retrovirus-related Pol polyprotein from transposo... 421 e-140
gb|PRQ35440.1| putative RNA-directed DNA polymerase [Rosa chinen... 414 e-137
gb|KYP41863.1| Retrovirus-related Pol polyprotein from transposo... 413 e-136
gb|KYP76789.1| Retrovirus-related Pol polyprotein from transposo... 406 e-136
dbj|GAV84965.1| UBN2 domain-containing protein, partial [Cephalo... 396 e-132
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo... 414 e-131
>gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 604
Score = 542 bits (1397), Expect = 0.0
Identities = 262/446 (58%), Positives = 333/446 (74%), Gaps = 9/446 (2%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D FPRIMGA TAKEAW LQEEF+G+EKVRA +LQTLRR FE L M +SET KDYYS++
Sbjct: 3 DTIFPRIMGATTAKEAWTTLQEEFEGSEKVRAVKLQTLRRNFELLNMKESETVKDYYSKI 62
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+VNQ+RA+GEN + KIV K+LI+ KYDPI+ IE++KD+ L+ TELMGSLEA+E
Sbjct: 63 KEIVNQMRAHGENILDKKIVEKVLISVPRKYDPIVTIIEQTKDLSTLSVTELMGSLEAYE 122
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQ-KNKKNGRKYNEGKPTDNN------DKFPPCGICKR 521
+RL R E +NAFQSKL ++SQ K+K+N + + K N +++PPCGICKR
Sbjct: 123 QRLNRHDEDSTENAFQSKLKLRSQNKDKRNNGETSRNKENCRNFSRNYQNEYPPCGICKR 182
Query: 522 KSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEEN 701
+H EKDC ++GKPQC++CKKFGHVEK CR K +HQANF+E E +LFY Q ++ E
Sbjct: 183 TNHAEKDCRYRGKPQCRHCKKFGHVEKYCRNKNKHQANFAEEKNGEQHLFYATQDSNSET 242
Query: 702 KDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYIN 878
+WYLDSGCSNHM K+ SIF +D+ + K+++GN +E+ GKGT+ ++TKKG R I
Sbjct: 243 SGSWYLDSGCSNHMAKDASIFKDIDESVKVKVRMGNDIVVESKGKGTVMVETKKGTRLIT 302
Query: 879 EVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQW 1055
+VLLVP + +NLLS+GQMMEKGY+L+FEGD+C IYD +K L I +VKM + NR FPI
Sbjct: 303 DVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYD--NKKLEIGRVKMEKRNRSFPISL 360
Query: 1056 RYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQ 1235
R + AM A+V+D+WLWHRRFGHFN LK+L QKNMMRDLP +KE CEGC+LGKQ
Sbjct: 361 RQGPNIAMKAEVDDSWLWHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGCLLGKQ 420
Query: 1236 HRQPFPSGKAWRAKKPLELVHTDICG 1313
HR PF +GKAWR K LEL+H DICG
Sbjct: 421 HRLPFSTGKAWRVKDLLELIHIDICG 446
>dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subterraneum]
Length = 858
Score = 519 bits (1336), Expect = e-174
Identities = 247/455 (54%), Positives = 334/455 (73%), Gaps = 18/455 (3%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D FPRIMGA +AK+AW L+EEFQG++KVRA +LQTLRR+FE ++M +SET KDYY+++
Sbjct: 81 DSIFPRIMGATSAKDAWGTLKEEFQGSDKVRAIKLQTLRREFELIQMKESETVKDYYTKI 140
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+V+Q+R+YG+N + +IV KILI+ KYD I+ IE++KD+ L+ TEL+GSLEA+E
Sbjct: 141 KELVSQMRSYGDNILDKRIVEKILISIPRKYDVIVTTIEQTKDLSTLSVTELIGSLEAYE 200
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQKN----KKNGRKYNEGKP-----TDNNDKFPPCGIC 515
+RL R + I+NAFQSKL ++SQ KKNGR+ + + + N ++PPCGIC
Sbjct: 201 QRLNRHDDNTIENAFQSKLKLRSQDKRYGVKKNGRENSRNEENSRNFSKKNQEYPPCGIC 260
Query: 516 KRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTE-------FENNLFY 674
KR +H EK C ++GK QCQ+CKKFGH+EK+C K +HQANF E E +E LFY
Sbjct: 261 KRTNHAEKYCRWRGKEQCQHCKKFGHLEKNCYSKNKHQANFVEEHECEKDQHDYEQQLFY 320
Query: 675 VCQAASEENKDTWYLDSGCSNHMTKNESIFCQL-DKISTKIKIGNGDYMEATGKGTIAID 851
Q ++++ WYLDSGCSNHM K+ESIF + D + K+++GNG +E+ GKGT+ ++
Sbjct: 321 ATQDSNDDLSKNWYLDSGCSNHMAKDESIFKDIDDSVKVKVRLGNGTIVESKGKGTVMVE 380
Query: 852 TKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-R 1028
TKKG R+I +VLLVP + +NLLS+GQMMEKGY+L+FEGD+C+IYD K I KVKM +
Sbjct: 381 TKKGTRFIKDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCSIYDNSHKRHEIAKVKMEK 440
Query: 1029 ENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGV 1208
NR FPI ++Y + A+ QV+D+WLWHRRFGHFN Q LK+L QKNMMR+LP +KE
Sbjct: 441 RNRSFPISFKYTTNIALKVQVDDSWLWHRRFGHFNTQALKMLYQKNMMRNLPYLKENSEA 500
Query: 1209 CEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICG 1313
CEG +LGKQHR FP+ + WR K LEL+HT++CG
Sbjct: 501 CEGYLLGKQHRLAFPTRETWRTKYVLELIHTNVCG 535
>gb|KYP52821.1| Copia protein [Cajanus cajan]
Length = 500
Score = 491 bits (1265), Expect = e-168
Identities = 245/445 (55%), Positives = 314/445 (70%), Gaps = 10/445 (2%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D F RIMGA T K+ W LQEEF+G+EKVRA +LQTLRR FE L M SET KDYYS++
Sbjct: 55 DTIFSRIMGATTTKKTWSMLQEEFEGSEKVRAIKLQTLRRNFELLNMKKSETVKDYYSKI 114
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+VNQ+RAY +N + KIV KILI+ + KYDPI+ IE++KD+ L+ T+LMGSLEA+E
Sbjct: 115 KEIVNQMRAYSKNILDKKIVEKILISVSRKYDPIVTTIEQTKDLSTLSVTKLMGSLEAYE 174
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQ-KNKKNGRKYNEGKPTDNN------DKFPPCGICKR 521
+RL R E +NAFQSKL +QSQ K+K+N + + K N +++PPCGICKR
Sbjct: 175 QRLNRHDENSTENAFQSKLKLQSQNKDKRNNGETSRNKENSRNFSRNYQNEYPPCGICKR 234
Query: 522 KSHLEKDCWFKG-KPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEE 698
+H EKDC ++G K C K HVEK CR K +HQA F E E +LFY Q ++ E
Sbjct: 235 TNHAEKDCRYRGNKATMSPCNKVEHVEKYCRNKNKHQAKFVEEKNGEQHLFYATQDSNSE 294
Query: 699 NKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYI 875
+ WYL S C NHM K+ SIF +D+ + K+++GN +E+ GKGTI ++TKKG R I
Sbjct: 295 TSENWYLHSVCINHMAKDASIFKDIDEPVKVKVRMGNNTVVESKGKGTIMVETKKGTRLI 354
Query: 876 NEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQ 1052
+VLLVP + +NLLS+GQMMEKGY+L+FEGD+C IYD +K L I +VKM + NR FPI
Sbjct: 355 ADVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYD--NKKLEIGRVKMEKRNRSFPIS 412
Query: 1053 WRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGK 1232
R + A A+V+D+WLWHRRFGHFN LK+L QKNMMRDLP +KE CEGC+LGK
Sbjct: 413 LRQGPNIATKAEVDDSWLWHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGCLLGK 472
Query: 1233 QHRQPFPSGKAWRAKKPLELVHTDI 1307
QH+ PF +GKAWRAK LEL+H +I
Sbjct: 473 QHQLPFSTGKAWRAKDLLELIHIEI 497
>gb|KYP58379.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 503
Score = 467 bits (1201), Expect = e-158
Identities = 225/433 (51%), Positives = 299/433 (69%), Gaps = 3/433 (0%)
Frame = +3
Query: 24 MGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQL 203
M A TAK+AWD L+EEF+GNE+VR+ +L LRR+FE +KM +SET ++YY R+ E+VN++
Sbjct: 1 MDADTAKKAWDILEEEFEGNEQVRSVKLHYLRREFETIKMKESETIEEYYGRIKEIVNKM 60
Query: 204 RAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERRY 383
+ YG+ E ++V KILIT TEKYD I+A+IE S D L+ +L+G L HE RL R
Sbjct: 61 KLYGKEIKEKRVVEKILITLTEKYDSIVASIETSSDPSSLSVNKLIGLLGVHEARLNSRA 120
Query: 384 EKD-IDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKDCWFKGK 560
+ + +NAFQSKL +Q++K DK+ CGIC + H EKDCW +GK
Sbjct: 121 DTNSFENAFQSKLKLQNKK-----------------DKYLSCGICNKPGHAEKDCWHRGK 163
Query: 561 PQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNH 740
P C K GHVEK CR K +HQANF+E E LFY Q + + +WYLDSGCSNH
Sbjct: 164 PICHYYNKPGHVEKYCRNKNKHQANFAEKHNQEQRLFYANQESCDNGDGSWYLDSGCSNH 223
Query: 741 MTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLL 917
M K++SIF +D + K+++GNG +E+ GKGT+ ++TKKG R I ++LLVP + +NLL
Sbjct: 224 MAKDQSIFKDIDNSVKVKVRLGNGTMVESQGKGTVMVETKKGTRLIKDMLLVPNLKENLL 283
Query: 918 SVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDAAMTAQVN 1094
S+GQMME GYSL+FE D C IYD K + I +VKM + NR FP+ + + + AM +V+
Sbjct: 284 SIGQMMENGYSLHFERDICKIYDSK--RVEIGQVKMEKRNRSFPLSFNHGTNIAMKVEVD 341
Query: 1095 DTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRA 1274
D+WLWHRRFGHFN+ LK+L+QK MMRDLP +KE CEGC+LGKQHR F + KAWRA
Sbjct: 342 DSWLWHRRFGHFNIHALKLLHQKGMMRDLPNLKENIEACEGCLLGKQHRLSFSTSKAWRA 401
Query: 1275 KKPLELVHTDICG 1313
K LEL+HTD+CG
Sbjct: 402 KDSLELIHTDVCG 414
>gb|KYP41992.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 465
Score = 457 bits (1177), Expect = e-155
Identities = 219/394 (55%), Positives = 286/394 (72%), Gaps = 3/394 (0%)
Frame = +3
Query: 141 MLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEK 320
M +SET KDYYS++ E VNQ+RAYGEN + KIV KILI+ KYDPI+ IE++KD+
Sbjct: 1 MKESETVKDYYSKIKETVNQMRAYGENILDKKIVEKILISVPRKYDPIVTTIEQTKDLST 60
Query: 321 LTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKN-GRKYNEGKPTDNNDKF 497
L+ TEL+GSLEA+E+RL R E +NAFQSKL +++++N +N R Y +++
Sbjct: 61 LSVTELIGSLEAYEQRLNRHDEDSTENAFQSKLKLRNKENSRNFSRNYQ--------NEY 112
Query: 498 PPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYV 677
PPCGIC R +H EKDC ++GKPQC++C K GHVEK CR K +HQ NF E + E +LFY
Sbjct: 113 PPCGICNRTNHAEKDCRYRGKPQCRHCNKVGHVEKYCRNKNKHQVNFVEEIDGEQHLFYA 172
Query: 678 CQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDT 854
Q ++ E +WYLDSG SNHM K+ SIF +D+ + K+++GN +E+ GKGT+ ++T
Sbjct: 173 SQDSNSETSGSWYLDSGYSNHMAKDASIFKDIDESVKVKVRMGNDTIVESKGKGTVMVET 232
Query: 855 KKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RE 1031
KKG R I +VLLVP + +NLLS+ QMMEK Y+L+FEGD+C IYD +K L +VKM +
Sbjct: 233 KKGTRLITDVLLVPNLKENLLSISQMMEKSYTLHFEGDTCKIYD--NKKLENGRVKMEKR 290
Query: 1032 NRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVC 1211
NR FPI R + AM +V+D+WLWHRRFGHFN+ LK+L QKNMMRDLP +KE C
Sbjct: 291 NRSFPISMRQDPNIAMKIEVDDSWLWHRRFGHFNMHALKLLYQKNMMRDLPCLKENSEAC 350
Query: 1212 EGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICG 1313
EGC+LGKQHR PF +GKAWRAK LEL+HTDICG
Sbjct: 351 EGCLLGKQHRLPFSTGKAWRAKDLLELIHTDICG 384
>gb|KYP65916.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 464
Score = 452 bits (1162), Expect = e-153
Identities = 218/394 (55%), Positives = 284/394 (72%), Gaps = 3/394 (0%)
Frame = +3
Query: 141 MLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEK 320
M +SET KDYYS++ E+VNQ+RAYGEN + KIV KI+I+ KYDPI+ IE+ KD+
Sbjct: 1 MKESETVKDYYSKIKEIVNQMRAYGENILDKKIVEKIIISVPRKYDPIMTTIEQIKDLST 60
Query: 321 LTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKN-GRKYNEGKPTDNNDKF 497
L+ TELMGSLEA+E+RL R E I+NAFQSKL ++++ N +N R Y +++
Sbjct: 61 LSVTELMGSLEAYEQRLNRHDEDSIENAFQSKLKLRNKDNSRNFSRNYQ--------NEY 112
Query: 498 PPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYV 677
PPC ICKR + EKDC + GKPQC++C K HV+K CR K +HQANF+E E +LFY
Sbjct: 113 PPCDICKRTNLAEKDCRYHGKPQCRHCNKVRHVKKYCRNKNKHQANFAEEKNGEQHLFYA 172
Query: 678 CQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDT 854
Q ++ E WYLDSGCSNHM K+ SIF +D+ + K+++GN +E+ GKGT+ ++T
Sbjct: 173 TQDSNSETSGNWYLDSGCSNHMAKDASIFKDIDESVKVKVRMGNDTVVESKGKGTVMVET 232
Query: 855 KKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RE 1031
KKG R I +V+LVP + +NLLS+GQMMEKGY+L+FEGDSC IYD +K L I +VKM +
Sbjct: 233 KKGMRLITDVILVPNLKENLLSIGQMMEKGYTLHFEGDSCKIYD--NKKLEIGRVKMEKR 290
Query: 1032 NRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVC 1211
NR FPI R + AM A+V+D+WLWH+RFGHFN L +L +KNMMRDLP +KE C
Sbjct: 291 NRSFPISLRQGLNFAMKAEVDDSWLWHQRFGHFNTHALNLLYKKNMMRDLPCLKENSEAC 350
Query: 1212 EGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICG 1313
EGC LGKQHR PF +GKAW AK LEL+HT+ICG
Sbjct: 351 EGCFLGKQHRLPFSTGKAWSAKDLLELIHTNICG 384
>gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 723
Score = 461 bits (1185), Expect = e-153
Identities = 230/445 (51%), Positives = 305/445 (68%), Gaps = 13/445 (2%)
Frame = +3
Query: 18 RIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVN 197
RIM TAK+AWD L+EEF+GNE+VR +L LRR+ E +KM +SET ++YY R+ E+VN
Sbjct: 61 RIMDTDTAKKAWDILEEEFEGNEQVRFVKLHYLRREIETIKMKESETIEEYYGRIKEIVN 120
Query: 198 QLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLER 377
+++ YG E ++V KILIT TEKYD I+A+IE S D L +L+G L AHE RL
Sbjct: 121 KMKLYGN---EKRVVEKILITLTEKYDSIVASIETSSDPSSLPVNKLIGLLGAHEARLNS 177
Query: 378 RYEKD-IDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNN----------DKFPPCGICKRK 524
R D + N FQSKL +QS +NK++G K N G+ + N DK+ CGIC +
Sbjct: 178 RVNTDSVKNEFQSKLKLQS-RNKEDGGKKNVGECSRNKYFRNFSRNKKDKYSSCGICNKS 236
Query: 525 SHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENK 704
H +KDCW +GKP C K GHVEK CR K +HQANF++ E +LFY Q S +
Sbjct: 237 GHAQKDCWHRGKPIRHYCNKPGHVEKYCRNKNKHQANFAKERNQEKHLFYANQE-SPSIE 295
Query: 705 DTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINE 881
++WYLDSGCSNHM ++SIF +D + K+++GN +E+ GKGT+ ++TKKG R I +
Sbjct: 296 ESWYLDSGCSNHMANDQSIFKDIDNSVKVKVRLGNDTMVESQGKGTVMVETKKGTRLIKD 355
Query: 882 VLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWR 1058
+LLVP + +NLLS+GQ ME YSL FE D C IYD K L + +VKM + N+ FPI ++
Sbjct: 356 ILLVPNLKENLLSIGQKMENRYSLLFERDICKIYDSK--RLKVGQVKMEKRNKSFPISFK 413
Query: 1059 YANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQH 1238
+ AM +V+D+WLWHRRFGHFN+ LK+L+QK MMRDLPT+KE + CEGC+LGKQH
Sbjct: 414 PGTNIAMKIEVDDSWLWHRRFGHFNIHALKLLHQKGMMRDLPTLKENNEACEGCLLGKQH 473
Query: 1239 RQPFPSGKAWRAKKPLELVHTDICG 1313
R PF + KAWRAK LEL+HTD+CG
Sbjct: 474 RLPFSTSKAWRAKNLLELIHTDVCG 498
>ref|XP_019055357.1| PREDICTED: uncharacterized protein LOC109115585 [Nelumbo nucifera]
Length = 401
Score = 444 bits (1142), Expect = e-151
Identities = 216/336 (64%), Positives = 260/336 (77%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
+E FP+IMGA TAKEAWD LQ EFQG+ KVR +LQ RR FENLKM D ETAKDYYSR+
Sbjct: 81 EEIFPQIMGASTAKEAWDTLQLEFQGSVKVRTVKLQKFRRDFENLKMKDIETAKDYYSRI 140
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+VNQ+RAY E + KIV KILI+CTE+YDPII+ IEE+K +E L+ TELMG+LE +E
Sbjct: 141 KEIVNQMRAYRETISDKKIVKKILISCTERYDPIISVIEETKGLETLSPTELMGTLETYE 200
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKD 542
R +++ E ++ AFQSK++ QS K K +GRK ++GKP +NND + CGICK+++HLE D
Sbjct: 201 NRRDKQNENSVEAAFQSKVNWQSHKTKVDGRK-SQGKPKENNDXYSSCGICKKRNHLEND 259
Query: 543 CWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLD 722
CWFKGKPQCQNCKKFGH+EK CR K+ HQANFSE ENNLF C +A EE KDTWYL
Sbjct: 260 CWFKGKPQCQNCKKFGHIEKVCRFKKTHQANFSEKKNEENNLFCACHSAIEEKKDTWYL- 318
Query: 723 SGCSNHMTKNESIFCQLDKISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTI 902
NHMTKNESIF LDKI TK+KIGN D+MEATG GTI +DTK+GK+YIN V
Sbjct: 319 ----NHMTKNESIFHSLDKIKTKVKIGNDDFMEATGIGTIIVDTKQGKKYINHV------ 368
Query: 903 DQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVI 1010
L+VGQM+E+GYSL+FEG+SCTIYDK DKSL I
Sbjct: 369 ----LNVGQMIERGYSLHFEGNSCTIYDKHDKSLKI 400
>gb|KYP34496.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan]
Length = 1012
Score = 461 bits (1186), Expect = e-150
Identities = 230/445 (51%), Positives = 305/445 (68%), Gaps = 13/445 (2%)
Frame = +3
Query: 18 RIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVN 197
RIM TAK+AWD L+EEF+GNE+VR +L LRR+ E +KM +SET ++YY R+ E+VN
Sbjct: 61 RIMDTDTAKKAWDILEEEFEGNEQVRFVKLHYLRREIETIKMKESETIEEYYGRIKEIVN 120
Query: 198 QLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLER 377
+++ YG E ++V KILIT TEKYD I+A+IE S D L +L+G L AHE RL
Sbjct: 121 KMKLYGNK--EKRVVEKILITLTEKYDSIVASIETSSDPSSLPVNKLIGLLGAHEARLNS 178
Query: 378 RYEKD-IDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNN----------DKFPPCGICKRK 524
R D + N FQSKL +QS +NK++G K N G+ + N DK+ CGIC +
Sbjct: 179 RVNTDSVKNEFQSKLKLQS-RNKEDGGKKNVGECSRNKYFRNFSRNKKDKYSSCGICNKS 237
Query: 525 SHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENK 704
H +KDCW +GKP C K GHVEK CR K +HQANF++ E +LFY Q S +
Sbjct: 238 GHAQKDCWHRGKPIRHYCNKPGHVEKYCRNKNKHQANFAKERNQEKHLFYANQE-SPSIE 296
Query: 705 DTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINE 881
++WYLDSGCSNHM ++SIF +D + K+++GN +E+ GKGT+ ++TKKG R I +
Sbjct: 297 ESWYLDSGCSNHMANDQSIFKDIDNSVKVKVRLGNDTMVESQGKGTVMVETKKGTRLIKD 356
Query: 882 VLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWR 1058
+LLVP + +NLLS+GQ ME YSL FE D C IYD K L + +VKM + N+ FPI ++
Sbjct: 357 ILLVPNLKENLLSIGQKMENRYSLLFERDICKIYDSK--RLKVGQVKMEKRNKSFPISFK 414
Query: 1059 YANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQH 1238
+ AM +V+D+WLWHRRFGHFN+ LK+L+QK MMRDLPT+KE + CEGC+LGKQH
Sbjct: 415 PGTNIAMKIEVDDSWLWHRRFGHFNIHALKLLHQKGMMRDLPTLKENNEACEGCLLGKQH 474
Query: 1239 RQPFPSGKAWRAKKPLELVHTDICG 1313
R PF + KAWRAK LEL+HTD+CG
Sbjct: 475 RLPFSTSKAWRAKNLLELIHTDVCG 499
>dbj|GAU22794.1| hypothetical protein TSUD_142340 [Trifolium subterraneum]
Length = 818
Score = 448 bits (1153), Expect = e-147
Identities = 224/455 (49%), Positives = 310/455 (68%), Gaps = 18/455 (3%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D FPRIMGA +AK+AW L+EEFQG++KVRA +LQTLRR+FE ++M +SET KDYY+++
Sbjct: 55 DSIFPRIMGATSAKDAWCTLKEEFQGSDKVRAIKLQTLRREFELIQMKESETVKDYYTKI 114
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+V+Q+R+YG+N + +IV KILI+ KYD I+ IE++KD+ L+ TEL+GSLEA+E
Sbjct: 115 KELVSQMRSYGDNILDKRIVEKILISIPRKYDAIVTTIEQTKDLSTLSVTELIGSLEAYE 174
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQK----NKKNGRKYNEGKP-----TDNNDKFPPCGIC 515
++L R + I+NAFQSKL ++SQ KKNGR+ + + + N ++PPCGIC
Sbjct: 175 QKLNRHDDNTIENAFQSKLKLRSQDKRYGGKKNGRENSRNEENSRNFSKKNQEYPPCGIC 234
Query: 516 KRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFEN-------NLFY 674
KR +H EK C ++GK QCQ+CKKFGHVEK+C K +HQANF E E EN +LFY
Sbjct: 235 KRTNHAEKYCRWRGKEQCQHCKKFGHVEKNCYSKNKHQANFVEENECENDQHDYEQHLFY 294
Query: 675 VCQAASEENKDTWYLDSGCSNHMTKNESIFCQL-DKISTKIKIGNGDYMEATGKGTIAID 851
Q ++++ WYLDSGCSNHM K+ESIF + D + K+++GNG +E+ GKGT+ ++
Sbjct: 295 ATQDSNDDLSRNWYLDSGCSNHMAKDESIFKNIDDSVKVKVRLGNGTIVESKGKGTVMVE 354
Query: 852 TKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-R 1028
TKKG R+I +VLLVP + +NLLS+GQMMEKGY+L+FEGD+C+IYD K I KVKM +
Sbjct: 355 TKKGTRFIKDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCSIYDNSHKRYEIAKVKMEK 414
Query: 1029 ENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGV 1208
N FPI ++Y + A+ QV D+W K++ +++D
Sbjct: 415 RNSSFPISFKYTTNIALKVQVGDSW--------------KVM---KLVKD---------- 447
Query: 1209 CEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICG 1313
+LGKQHR FP G+ WR K LEL+HTD+CG
Sbjct: 448 ----VLGKQHRLAFPIGETWRTKDVLELIHTDVCG 478
>gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 570
Score = 437 bits (1124), Expect = e-146
Identities = 211/380 (55%), Positives = 275/380 (72%), Gaps = 9/380 (2%)
Frame = +3
Query: 201 LRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERR 380
+RAY EN + KIV KILI+ + KYDPI+ IE++KD+ L+ ELMG LEA+E+RL R
Sbjct: 1 MRAYEENILDKKIVEKILISVSRKYDPIVTTIEQTKDLSTLSVIELMGLLEAYEQRLNRH 60
Query: 381 YEKDIDNAFQSKLSMQSQ-KNKKNGRKYNEGKPTDNN------DKFPPCGICKRKSHLEK 539
E +NAFQSKL ++SQ K+K+N + + K N +++PPCGICKR +H E+
Sbjct: 61 DEDSTENAFQSKLKLRSQNKDKRNNGETSRNKENSRNFSRNYQNEYPPCGICKRTNHAEQ 120
Query: 540 DCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYL 719
DC + GKPQC++C K GHVEK CR K +HQANF+E E +LFY Q ++ E WYL
Sbjct: 121 DCRYHGKPQCRHCNKVGHVEKYCRNKNKHQANFAEEKNGEQHLFYATQDSNSETSGNWYL 180
Query: 720 DSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVP 896
DSGC+NHM K+ SIF +D+ + K+++GN +E+ GKGT+ ++TKKG R I +VLLVP
Sbjct: 181 DSGCNNHMAKDASIFKDIDESVKVKVRMGNDIVVESKGKGTVMVETKKGTRLITDVLLVP 240
Query: 897 TIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDA 1073
+ +NLLS+GQMMEKGY+L+FEGD+C IYD +K L I +VKM + NR FPI R +
Sbjct: 241 NLKENLLSIGQMMEKGYTLHFEGDTCKIYD--NKKLEIGRVKMEKRNRSFPISLRQGPNI 298
Query: 1074 AMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFP 1253
AM A+V+D+WLWHRRFGHFN LK+L QKNMMRDLP +KE CEGC+LGKQHR PF
Sbjct: 299 AMKAEVDDSWLWHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGCLLGKQHRLPFS 358
Query: 1254 SGKAWRAKKPLELVHTDICG 1313
+GKAWRAK LEL+HT+ICG
Sbjct: 359 TGKAWRAKDLLELIHTNICG 378
>gb|KYP76948.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 422
Score = 427 bits (1099), Expect = e-144
Identities = 211/432 (48%), Positives = 278/432 (64%), Gaps = 2/432 (0%)
Frame = +3
Query: 24 MGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQL 203
M A TAK+AWD L+EEF+GNE+VR+ +L LRR+FE +KM +SET ++YY R+ E+VN++
Sbjct: 1 MDADTAKKAWDILEEEFEGNEQVRSVKLHYLRREFETIKMKESETIEEYYGRIKEIVNKM 60
Query: 204 RAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERRY 383
+ YG+ E ++V KILIT TEKYD I+A+IE S D L+ +L+G L AHE RL
Sbjct: 61 KLYGKEIKEKRVVEKILITLTEKYDSIVASIETSSDPSSLSVNKLIGLLGAHEARL---- 116
Query: 384 EKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKDCWFKGKP 563
+ +KDCW +GKP
Sbjct: 117 ------------------------------------------------NSQKDCWHRGKP 128
Query: 564 QCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHM 743
C C K GHVEK CR K +HQANF+E E LFY Q + + +WYLDSGCSNHM
Sbjct: 129 ICHYCNKPGHVEKYCRNKNKHQANFAEEHNQEQRLFYANQESCDNGDGSWYLDSGCSNHM 188
Query: 744 TKNESIFCQLD-KISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLS 920
K++SIF +D + K+++GNG +E+ GKGT+ ++TKKG R I +VLLVP + +NLLS
Sbjct: 189 AKDQSIFKDIDNSVKVKVRLGNGTMVESQGKGTVVVETKKGTRLIKDVLLVPNLKENLLS 248
Query: 921 VGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDAAMTAQVND 1097
+GQMME GYSL+FE D C IYD K + I +VKM + NR FP+ + + AM +V+D
Sbjct: 249 IGQMMENGYSLHFERDICKIYD--SKRVEIGQVKMEKRNRSFPLSFNCGTNLAMKVEVDD 306
Query: 1098 TWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAK 1277
+WLWHRRFGHFN+ LK+L+QK MMRDLP +KE + CEGC+LGKQHR PF + KAWRAK
Sbjct: 307 SWLWHRRFGHFNIHALKLLHQKGMMRDLPNLKENNEACEGCLLGKQHRLPFSTSKAWRAK 366
Query: 1278 KPLELVHTDICG 1313
LEL+HTD+CG
Sbjct: 367 DLLELIHTDVCG 378
>gb|KHN42845.1| Copia protein, partial [Glycine soja]
Length = 408
Score = 422 bits (1086), Expect = e-142
Identities = 205/374 (54%), Positives = 271/374 (72%), Gaps = 2/374 (0%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D FPRIMGAKTAKEAW+ LQEEFQG+ KVRA +LQ+LRR FE LKM +SET K+Y+S+V
Sbjct: 46 DPIFPRIMGAKTAKEAWNTLQEEFQGSVKVRAVKLQSLRRDFELLKMKESETVKNYHSKV 105
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+V+Q+RA+GE+ + KIV KILIT +K+DPI+ IEE+KD+ L+ TEL+GSLEA+E
Sbjct: 106 KEIVSQMRAFGEDILDKKIVEKILITMPQKFDPIVTTIEETKDLSTLSETELVGSLEAYE 165
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKD 542
+RL R E I+N FQSK S+ KN DK PPC ICKR+ H EK+
Sbjct: 166 QRLYRHKEDTIENVFQSKRREGSRNFLKN-----------KTDKNPPCNICKRQGHAEKN 214
Query: 543 CWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLD 722
CWF+ PQC +CKKF HVEK CR K RHQAN +E + E +FY Q + +E +WYLD
Sbjct: 215 CWFRNMPQCNHCKKFRHVEKICRNKNRHQANIAEEHDQEQCMFYATQDSIKEKGGSWYLD 274
Query: 723 SGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPT 899
SGCSNHM K+E+IF +D+ + K+++GNG +E+ GKGT+ ++T KG R I++VLLVP+
Sbjct: 275 SGCSNHMAKDETIFKSIDESVKVKVRLGNGSVVESKGKGTVMVETYKGTRLIHDVLLVPS 334
Query: 900 IDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDAA 1076
+ +NLLS+GQMME+GY+L+FEG C I D K+K I +VKM + NR FP+ +YA + +
Sbjct: 335 LKENLLSIGQMMERGYTLHFEGGVCKILDNKNKRFEIAQVKMNKSNRSFPLNLKYATNIS 394
Query: 1077 MTAQVNDTWLWHRR 1118
M QV+D+WLWHRR
Sbjct: 395 MKVQVDDSWLWHRR 408
>gb|KYP43166.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 412
Score = 416 bits (1069), Expect = e-140
Identities = 218/432 (50%), Positives = 280/432 (64%), Gaps = 2/432 (0%)
Frame = +3
Query: 24 MGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQL 203
MGA TAKEAW LQEEF+G+EKVRA +LQTLRR FE L M + ET KDYYS++ E+VNQ+
Sbjct: 1 MGATTAKEAWTTLQEEFEGSEKVRAVKLQTLRRNFELLNMKEFETVKDYYSKIKEIVNQM 60
Query: 204 RAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERRY 383
AY EN + KIV KILI+ KYDPI+ IE++KD+ L+ TELM SLEA+E+R
Sbjct: 61 GAYRENILDKKIVEKILISVPRKYDPIVTTIEQTKDLSTLSVTELMRSLEAYEQRTNH-- 118
Query: 384 EKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKDCWFKGKP 563
++K+ + RK P C CK+ H
Sbjct: 119 ---------------AEKDCRYRRK-------------PQCPHCKKFGH----------- 139
Query: 564 QCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHM 743
VEK CR K +HQ NF+E + E LFY Q ++ E +WYLDSGCSNHM
Sbjct: 140 ----------VEKYCRNKNKHQTNFAEEKDGEQYLFYATQDSNSETSGSWYLDSGCSNHM 189
Query: 744 TKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLS 920
K+ +IF +D+ + K++IGN +E+ GKGT+ ++TKKG R I +VLLVP + +NLLS
Sbjct: 190 AKDANIFKDIDESVKVKVRIGNDTIVESKGKGTVMVETKKGTRLITDVLLVPNLKENLLS 249
Query: 921 VGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDAAMTAQVND 1097
+GQMMEKGY+L+F+GD+C IYD +K L I +VKM + NR FPI R + AM A+V+D
Sbjct: 250 IGQMMEKGYTLHFKGDTCKIYD--NKKLEIGRVKMEKRNRSFPISLRQGPNIAMKAEVDD 307
Query: 1098 TWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAK 1277
+WLWHRRFGHFN+ LK+L QKNMMRDLP +KE CEGC+LGKQHR F + KA RAK
Sbjct: 308 SWLWHRRFGHFNIHALKLLYQKNMMRDLPCLKENSEACEGCLLGKQHRLQFSTSKARRAK 367
Query: 1278 KPLELVHTDICG 1313
LE++HTDICG
Sbjct: 368 DLLEMIHTDICG 379
>gb|KYP53945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 558
Score = 421 bits (1082), Expect = e-140
Identities = 218/447 (48%), Positives = 294/447 (65%), Gaps = 17/447 (3%)
Frame = +3
Query: 24 MGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQL 203
M A TAK+AWD L+EEF+GNE+VR+ +L LRR+FE +KM +SET ++YY R+ E+VN++
Sbjct: 1 MDADTAKKAWDTLEEEFEGNEQVRSVKLHYLRREFETIKMKESETIEEYYGRIKEIVNKM 60
Query: 204 RAYGENFPESKIVSKILITCTEKYDPIIA-AIEESKDIEKLTATELMG---SLEAHEKRL 371
+ YG+ E ++V KILIT TEKYD I+A +IE S D L +L+G + EAHE RL
Sbjct: 61 KLYGKEIKEKRVVEKILITLTEKYDSIVAYSIETSSDPSSLPVNKLIGLHEAHEAHEARL 120
Query: 372 ERRYEKD-IDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNN----------DKFPPCGICK 518
R D I+NAFQSKL +Q +NK++G K N + + N DK+ CGIC
Sbjct: 121 NSRVNIDSIENAFQSKLKLQP-RNKEDGGKKNVRECSINKNFRNFSENKKDKYSLCGICN 179
Query: 519 RKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEE 698
+ H EKDCW GKP C C K GHVEK CR K +HQ NF+E E
Sbjct: 180 KPGHAEKDCWHHGKPICHYCNKSGHVEKYCRNKNKHQENFAEEQE--------------- 224
Query: 699 NKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYI 875
+WYLD+GC+NHM K++SIF +D + K+++GN +E+ GK T+ ++TKKG R I
Sbjct: 225 ---SWYLDNGCNNHMAKDQSIFKDIDNSVKVKVRLGNDTMVESQGKCTVMVETKKGMRLI 281
Query: 876 NEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQ 1052
++LLVP + +NLLS+GQMME Y L FE D C IYD K L + +VKM + NR FPI
Sbjct: 282 KDILLVPNLKENLLSIGQMMENRYFLLFERDICKIYDSK--MLEVGQVKMEKRNRNFPIS 339
Query: 1053 WRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGK 1232
+++ + A+ +V+D+WLWH+RFGHFN+ LK L+QK M RDLP++KE + CEG +L K
Sbjct: 340 FKFGTNIAIKIEVDDSWLWHQRFGHFNIHALKHLHQKGMTRDLPSLKENNEACEGFLLEK 399
Query: 1233 QHRQPFPSGKAWRAKKPLELVHTDICG 1313
QHR F + KA RAK LEL+HTD+CG
Sbjct: 400 QHRLSFSTSKALRAKDLLELIHTDVCG 426
>gb|PRQ35440.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 535
Score = 414 bits (1065), Expect = e-137
Identities = 205/377 (54%), Positives = 275/377 (72%), Gaps = 14/377 (3%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D F RIMGA T+KEAWD L+EEFQG KVR+ +LQT+RR+ ENLKM DSE KDYYSR+
Sbjct: 79 DTNFSRIMGATTSKEAWDLLKEEFQGTTKVRSVKLQTMRRELENLKMKDSEIVKDYYSRL 138
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+VNQLRAYGEN E+++V KILI+ TEKYDPI+ AIE SKD+ L+ TEL+GSLEA+E
Sbjct: 139 KEIVNQLRAYGENISETRVVEKILISLTEKYDPIVTAIENSKDMTTLSVTELIGSLEAYE 198
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNE-------------GKPTDNNDKFPP 503
KRL R E I++AF+SKL+++SQKN+K +K+ E K + P
Sbjct: 199 KRLSSRNESPIESAFRSKLNIRSQKNEKE-KKFEEFSRGGDRPKYWANKKDIKEKRNYSP 257
Query: 504 CGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQ 683
CGIC + +H EKDCWF+GKP+C+NC KFGH+E++C LK+ H+A+FSE E + LFY C
Sbjct: 258 CGICHKNNHQEKDCWFRGKPKCRNCNKFGHIEENCFLKKNHRADFSEENEQDEQLFYACH 317
Query: 684 AASEENKDTWYLDSGCSNHMTKNESIFCQLD-KISTKIKIGNGDYMEATGKGTIAIDTKK 860
+A EE WY+DSGCSNHM+ +++IF +LD +++K+GNG+ ++ GKGTI+I T
Sbjct: 318 SAIEERNKKWYVDSGCSNHMSGDKTIFSKLDTSQKSQVKLGNGEMVKTKGKGTISIPTNL 377
Query: 861 GKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRC 1040
G + IN+VLLVP+++ NLLSVGQM+E GY++ F GD C I+DKK + +I K++M+ NR
Sbjct: 378 GTKKINDVLLVPSLEHNLLSVGQMLENGYAILFHGDFCKIFDKKRR--LIFKIRMK-NRN 434
Query: 1041 FPIQWRYANDAAMTAQV 1091
FPIQW+ AM A+V
Sbjct: 435 FPIQWQ---QMAMKAEV 448
>gb|KYP41863.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
gb|KYP41870.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 617
Score = 413 bits (1062), Expect = e-136
Identities = 220/442 (49%), Positives = 285/442 (64%), Gaps = 5/442 (1%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D F RIMGA TAKEAW LQEEF+G+EKVRA +LQTL+R FE L M +SET KDYYS++
Sbjct: 81 DTIFLRIMGATTAKEAWTTLQEEFEGSEKVRAIKLQTLQRDFELLNMKESETVKDYYSKI 140
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+VNQ+RAYG+N + KIV KILI+ + KYDPI+ I ++KD+ L+ +LMGSLEA+E
Sbjct: 141 KEIVNQMRAYGKNILDKKIVEKILISVSHKYDPIMTMIAQTKDLSTLSVAKLMGSLEAYE 200
Query: 363 KRLERRY---EKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHL 533
+ + +R EKD +S+ C CK+ H
Sbjct: 201 QSICKRINHAEKDYRYRGKSQ-----------------------------CFHCKKIGH- 230
Query: 534 EKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTW 713
VEK CR K +HQANF+E + E +LFY Q ++ E +W
Sbjct: 231 --------------------VEKYCRKKNKHQANFAEEKDGEQHLFYASQDSNSETSGSW 270
Query: 714 YLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLL 890
YLDSGCSNHM K+ IF +D+ + K+++GN +E+ GKGT+ ++TKKG R I +VLL
Sbjct: 271 YLDSGCSNHMAKDACIFKDIDESVKVKVRMGNDTIVESEGKGTVMVETKKGTRLIADVLL 330
Query: 891 VPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENR-CFPIQWRYAN 1067
VP + +NLLS+GQM+EKGY+L+FEGD+C IYD +K L I +VKM + FPI R
Sbjct: 331 VPNLKENLLSIGQMIEKGYTLHFEGDTCKIYD--NKRLEIGRVKMEKRTISFPISLRQGP 388
Query: 1068 DAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQP 1247
AM A+V+++WLWHR FGHFN LK+L QKNMMRDL +KE CEGC+LGKQHR P
Sbjct: 389 KFAMKAEVDNSWLWHRIFGHFNTHALKLLYQKNMMRDLLCLKENIKACEGCLLGKQHRLP 448
Query: 1248 FPSGKAWRAKKPLELVHTDICG 1313
F +GKAWRAK LEL+HTDICG
Sbjct: 449 FSTGKAWRAKDLLELIHTDICG 470
>gb|KYP76789.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 441
Score = 406 bits (1044), Expect = e-136
Identities = 213/414 (51%), Positives = 269/414 (64%), Gaps = 2/414 (0%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D FP+IMGA TAKEAW LQEEF+G+EKVRA +LQTLRR FE L M +SET KDYYS++
Sbjct: 81 DTIFPKIMGATTAKEAWTTLQEEFEGSEKVRAVKLQTLRRNFELLNMKESETIKDYYSKI 140
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
E+VNQ+RAY EN KIV KILI+ KYDPI+ IE++K++ L+ EL+GSLEA+E
Sbjct: 141 KEIVNQMRAYRENILNKKIVEKILISVPRKYDPIVTTIEQTKNLSTLSVIELIGSLEAYE 200
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKD 542
+R EKD R+Y GKP
Sbjct: 201 QRTNHA-EKD--------------------RRY-RGKP---------------------- 216
Query: 543 CWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLD 722
QC++C K GHVEK CR K +HQANF+E E +LFY Q ++ E WYLD
Sbjct: 217 -------QCRHCNKVGHVEKYCRNKNKHQANFAEEKNGEQHLFYATQDSNSETSGNWYLD 269
Query: 723 SGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPT 899
SGCSNHM K+ SIF +D+ + K+++GN +E+ GKGT+ ++ KKG R I +VLLVP
Sbjct: 270 SGCSNHMAKDASIFKDIDESVKVKVRMGNDTIVESKGKGTVMVEMKKGTRLITDVLLVPN 329
Query: 900 IDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDAA 1076
+ +NLLS+GQMMEKGY+L+FEGD+C IYD +K L I +VKM + NR FPI R + A
Sbjct: 330 LKENLLSIGQMMEKGYTLHFEGDTCKIYD--NKKLEIGRVKMEKRNRSFPISLRQGPNIA 387
Query: 1077 MTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQH 1238
M A+V+D+WLWHRRFGHFN LK+L QKNMMRDL +KE CEGC+LGKQH
Sbjct: 388 MKAEVDDSWLWHRRFGHFNTHALKLLYQKNMMRDLSCLKENSEACEGCLLGKQH 441
>dbj|GAV84965.1| UBN2 domain-containing protein, partial [Cephalotus follicularis]
Length = 387
Score = 396 bits (1017), Expect = e-132
Identities = 186/364 (51%), Positives = 258/364 (70%), Gaps = 2/364 (0%)
Frame = +3
Query: 3 DEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRV 182
D FPRIM + +AKEAWD Q+EF+G K+RA +LQTLRR FENL+M + ET KD+ SR
Sbjct: 21 DSIFPRIMNSTSAKEAWDTFQDEFKGTVKIRAIKLQTLRRDFENLRMTEGETIKDFSSRA 80
Query: 183 NEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHE 362
EVVNQ+++YG N +++ K LI+ TEK+D ++ IEE++++ +L+ TEL+GSL+AHE
Sbjct: 81 IEVVNQMKSYGGNITNQRVIEKFLISLTEKFDSVVNIIEETRNLSELSVTELVGSLQAHE 140
Query: 363 KRLERRYEKDIDNAFQSKLSMQSQ-KNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEK 539
+R+ RR E I+ AFQSK + Q K K+ R+ K +N KFPPCGIC++ SH EK
Sbjct: 141 QRISRRTEVSIEGAFQSKHKNKFQPKGGKSQRRQGNSKEGENKGKFPPCGICQKSSHQEK 200
Query: 540 DCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYL 719
DCW KGKP+C+NCKKFGH +++CRLKQ+ QA SE E EN +FY C +A+ + D W +
Sbjct: 201 DCWQKGKPRCKNCKKFGHTDQTCRLKQQQQAGVSETQEAENQIFYACHSATAKKDDVWLI 260
Query: 720 DSGCSNHMTKNESIFCQLD-KISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVP 896
DSGC+NHM KN + F Q+D I I++G+G +++ GKGT+AI TKKG R+IN+VL VP
Sbjct: 261 DSGCTNHMAKNPTFFTQIDTTIKVPIQMGDGGLVQSEGKGTVAIQTKKGTRFINDVLYVP 320
Query: 897 TIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPIQWRYANDAA 1076
+ QNLLSV QM+ YSL FEG +C I+D + K I +V M +N+ FPI+W Y ++
Sbjct: 321 DLSQNLLSVPQMITNNYSLLFEGSTCAIFDAQKKE--IARVNM-QNKTFPIKWNYTTESL 377
Query: 1077 MTAQ 1088
+ +Q
Sbjct: 378 LVSQ 381
>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1120
Score = 414 bits (1063), Expect = e-131
Identities = 212/435 (48%), Positives = 291/435 (66%), Gaps = 3/435 (0%)
Frame = +3
Query: 18 RIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVN 197
RIM TAK+AWD L+EEF+GNE+VR+ +L LRR+FE +KM +SET ++YY R+ E++N
Sbjct: 27 RIMDVDTAKKAWDILEEEFEGNEQVRSVKLHYLRREFETIKMKESETIEEYYGRIKEIIN 86
Query: 198 QLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLER 377
+++ YG+ E ++V EKYD I+A+IE S D L+ +L+G L+AH+ RL
Sbjct: 87 KMKLYGKEIKEKRVV--------EKYDSIVASIETSSDPSSLSVNKLIGLLKAHKARLNS 138
Query: 378 RYEKDI-DNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKDCWFK 554
+ + +NAFQSKL +QS +NK++G K N GK + N D + S +KD +
Sbjct: 139 CVDTNSNENAFQSKLKLQS-RNKEDGGKKNAGKYSRNKDS-------RNFSGNKKDKY-- 188
Query: 555 GKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCS 734
P C C K GH EK C H+ANF E E LFY Q + +WYLDSGCS
Sbjct: 189 --PLCGICNKPGHAEKDCW----HRANFVEEHNQEQRLFYANQEFCDNGDGSWYLDSGCS 242
Query: 735 NHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQN 911
NHM K+++IF +D + K+++GNG +E+ GKGT+ ++TKKG R I +VLLVP + +N
Sbjct: 243 NHMAKDQNIFKDIDNSVKVKVRLGNGTMVESQGKGTVVVETKKGTRLIKDVLLVPNLKEN 302
Query: 912 LLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKM-RENRCFPIQWRYANDAAMTAQ 1088
LLS+GQMME GYSL+FE D C IYD K + I +VKM + NR FP+ + + AM +
Sbjct: 303 LLSIGQMMENGYSLHFERDICKIYDSK--RVEIGQVKMEKRNRIFPLSFNRGTNIAMNVE 360
Query: 1089 VNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAW 1268
V+D+WLWHRRFGHFN+ LK+L+QK MMRDLP++KE + CEGC+LGKQHR F + KAW
Sbjct: 361 VDDSWLWHRRFGHFNIHALKLLHQKGMMRDLPSLKENNEACEGCLLGKQHRSSFSTSKAW 420
Query: 1269 RAKKPLELVHTDICG 1313
RAK LEL+HT++CG
Sbjct: 421 RAKDLLELIHTNVCG 435