BLASTX nr result
ID: Rehmannia30_contig00002137
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00002137
(4427 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II su... 2204 0.0
gb|KZV51965.1| DNA-directed RNA polymerase II subunit [Dorcocera... 2201 0.0
ref|XP_011096303.1| DNA-directed RNA polymerase II subunit RPB2 ... 2196 0.0
ref|XP_022845642.1| DNA-directed RNA polymerase II subunit RPB2 ... 2196 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2193 0.0
ref|XP_021657771.1| DNA-directed RNA polymerase II subunit RPB2 ... 2184 0.0
ref|XP_012091599.1| DNA-directed RNA polymerase II subunit RPB2 ... 2184 0.0
ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II su... 2183 0.0
ref|XP_002519060.1| PREDICTED: DNA-directed RNA polymerase II su... 2182 0.0
ref|XP_022723357.1| DNA-directed RNA polymerase II subunit RPB2 ... 2182 0.0
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 2181 0.0
ref|XP_007025631.1| PREDICTED: DNA-directed RNA polymerase II su... 2180 0.0
ref|XP_021294485.1| DNA-directed RNA polymerase II subunit RPB2 ... 2179 0.0
ref|XP_021596788.1| DNA-directed RNA polymerase II subunit RPB2 ... 2179 0.0
ref|XP_015889960.1| PREDICTED: DNA-directed RNA polymerase II su... 2178 0.0
gb|PNT39531.1| hypothetical protein POPTR_004G043200v3 [Populus ... 2176 0.0
ref|XP_019266160.1| PREDICTED: DNA-directed RNA polymerase II su... 2175 0.0
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su... 2175 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2175 0.0
ref|XP_015066015.1| PREDICTED: DNA-directed RNA polymerase II su... 2175 0.0
>ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
guttata]
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Erythranthe guttata]
Length = 1197
Score = 2204 bits (5710), Expect = 0.0
Identities = 1101/1159 (94%), Positives = 1111/1159 (95%), Gaps = 6/1159 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 25 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 84
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 85 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 144
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 145 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 204
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMF+RML+RTSAKGGSSGQY
Sbjct: 205 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFIRMLARTSAKGGSSGQY 264
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIR+EIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 265 IRATLPYIRSEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 324
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTR++RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 325 VALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 384
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 385 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 444
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 445 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 504
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 505 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 564
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHRNPDMLVST RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 565 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 624
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG
Sbjct: 625 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGFIEYIDTEEEETTMIS 684
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLVSAR+NP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 685 MTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 744
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 745 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 804
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 805 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 864
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRHSETGMVDQVLLTTNA 1221
LAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRHSETGMVDQVLLTTNA
Sbjct: 865 LAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRHSETGMVDQVLLTTNA 924
Query: 1220 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIP 1041
DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGI PDIIVNPHAIP
Sbjct: 925 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGINPDIIVNPHAIP 984
Query: 1040 SRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 861
SRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+ETMYNGHTG
Sbjct: 985 SRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYETMYNGHTG 1044
Query: 860 RKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 681
RKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1045 RKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1104
Query: 680 IAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 501
IAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKKNSFECR CKNKTDIVQVHIPYA
Sbjct: 1105 IAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANLKKNSFECRACKNKTDIVQVHIPYA 1164
Query: 500 CKLLFQELMSMAIAPRMLT 444
CKLLFQELMSMAIAPRMLT
Sbjct: 1165 CKLLFQELMSMAIAPRMLT 1183
>gb|KZV51965.1| DNA-directed RNA polymerase II subunit [Dorcoceras hygrometricum]
Length = 1194
Score = 2201 bits (5702), Expect = 0.0
Identities = 1096/1158 (94%), Positives = 1113/1158 (96%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 82
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVI+KGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQ+TKIFVNGCWVGIHRNPDMLVST RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQSTKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLI+KKDIQALQQRESPD+GGWHDLVAKG
Sbjct: 623 YGRCSRPLFIVEKQRLLIRKKDIQALQQRESPDEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I+DLVSAR+NPSEAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 683 MTISDLVSARINPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743 MGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 802
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ D+AQGQAARYTKRDHSTSLRHSETG+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISADDAQGQAARYTKRDHSTSLRHSETGIVDQVLLTTNAD 922
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L+SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>ref|XP_011096303.1| DNA-directed RNA polymerase II subunit RPB2 [Sesamum indicum]
Length = 1193
Score = 2196 bits (5691), Expect = 0.0
Identities = 1094/1158 (94%), Positives = 1111/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE+ADIEIRPESQHNPGHQP+
Sbjct: 22 ITQEDAWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDEAADIEIRPESQHNPGHQPE 81
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFP+AARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 82 FAETIYKISFGQIYLSKPMMTESDGETATLFPRAARLRNLTYSAPLYVDVTKRVIKKGHD 141
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSR SAKGGSSGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRASAKGGSSGQY 261
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 382 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 441
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENF+EI
Sbjct: 502 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFKEI 561
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHRNPDMLVST RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 562 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI+ALQQRESP+DGGWHDLVAKG
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKKDIRALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 681
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I DLV+ARLNP+EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 682 MTIGDLVNARLNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHSETG+VDQVLLTTNAD
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHSETGIVDQVLLTTNAD 921
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGI PDIIVNPHAIPS
Sbjct: 922 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 981
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 982 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1041
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1042 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1101
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1102 AHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1161
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1162 KLLFQELMAMAIAPRMLT 1179
>ref|XP_022845642.1| DNA-directed RNA polymerase II subunit RPB2 [Olea europaea var.
sylvestris]
Length = 1190
Score = 2196 bits (5689), Expect = 0.0
Identities = 1095/1158 (94%), Positives = 1107/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 19 ITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 78
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 79 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 138
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 139 GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 258
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 259 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 318
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 319 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 378
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 379 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 438
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 499 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 558
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 559 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 618
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDIQALQQRES D+GGWHDLVAKG
Sbjct: 619 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESLDEGGWHDLVAKGFIEYIDTEEEETTMIS 678
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLVSARLNP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 679 MTINDLVSARLNPKEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 738
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 739 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 798
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDG
Sbjct: 799 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 858
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI PD+AQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 859 LAPPGTRVSGEDVIIGKTTPITPDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 918
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 919 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 978
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 979 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1038
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1039 QLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1098
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1099 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1158
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELMSMAIAPRMLT
Sbjct: 1159 KLLFQELMSMAIAPRMLT 1176
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2193 bits (5682), Expect = 0.0
Identities = 1093/1158 (94%), Positives = 1108/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIK+KDIQALQQRE+P+DGGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLVSARLNP EAYS+TYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDV+IGKTTPIA DEAQG AARYT+RDHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELMSMAIAPRMLT
Sbjct: 1160 KLLFQELMSMAIAPRMLT 1177
>ref|XP_021657771.1| DNA-directed RNA polymerase II subunit RPB2 [Hevea brasiliensis]
Length = 1192
Score = 2184 bits (5660), Expect = 0.0
Identities = 1088/1158 (93%), Positives = 1106/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 81 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHRNPDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I+DLV ARLNP EAY+DTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ DEAQGQ+ARYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQDEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 980
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 981 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1040
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1041 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1100
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1101 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1160
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1161 KLLFQELMAMAIAPRMLT 1178
>ref|XP_012091599.1| DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Jatropha
curcas]
ref|XP_020541368.1| DNA-directed RNA polymerase II subunit RPB2 isoform X2 [Jatropha
curcas]
Length = 1193
Score = 2184 bits (5659), Expect = 0.0
Identities = 1087/1158 (93%), Positives = 1107/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 81
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 82 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 141
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS+MFVRMLSRTSAKGGSSGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+DVRSYVQKCVDNGKDVNLQFAI
Sbjct: 382 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAI 441
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 502 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 561
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 562 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 681
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I+DLV AR+NP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 682 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 921
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 922 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 981
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 982 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1041
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1042 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1101
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1102 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1161
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1162 KLLFQELMAMAIAPRMLT 1179
>ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii]
ref|XP_012449723.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii]
ref|XP_017641873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
arboreum]
ref|XP_017641874.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
arboreum]
gb|KHG27061.1| DNA-directed RNA polymerase II subunit RPB2 [Gossypium arboreum]
gb|KJB68623.1| hypothetical protein B456_010G255400 [Gossypium raimondii]
gb|KJB68624.1| hypothetical protein B456_010G255400 [Gossypium raimondii]
gb|PPS13790.1| hypothetical protein GOBAR_AA06752 [Gossypium barbadense]
Length = 1189
Score = 2183 bits (5656), Expect = 0.0
Identities = 1085/1158 (93%), Positives = 1107/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVG+HRNPDMLV+T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRE+P+DGGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV AR+NP EAYS+TYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ +EAQGQA+RY+KRDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSKRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>ref|XP_002519060.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis]
gb|EEF43271.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
Length = 1194
Score = 2182 bits (5655), Expect = 0.0
Identities = 1087/1158 (93%), Positives = 1106/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I+DLV AR+NP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>ref|XP_022723357.1| DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Durio
zibethinus]
Length = 1189
Score = 2182 bits (5653), Expect = 0.0
Identities = 1084/1158 (93%), Positives = 1106/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVG+HRNPDMLV+T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV AR NP EAYS+TYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARTNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ +EAQGQA RY++RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PD+IVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDVIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 2181 bits (5652), Expect = 0.0
Identities = 1086/1158 (93%), Positives = 1107/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
I+QEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QPD
Sbjct: 29 ISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPD 88
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVI+KGHD
Sbjct: 89 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 148
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 149 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 208
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 209 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAEAQNRPPSTMFVRMLSRTSAKGGSSGQY 268
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHIC+N DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 269 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICFNSSDTQMMELLRPSLEEAFVIQNQQ 328
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 329 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 388
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQF I
Sbjct: 389 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFXI 448
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRL+SPIGREGKLA
Sbjct: 449 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLBSPIGREGKLA 508
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 509 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 568
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNG WVGIHRNPDMLVST RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 569 SPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 628
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKD+QALQQRESPDDGGWH+LVAKG
Sbjct: 629 YGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYIDTEEEETTMIS 688
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDL+SA++NP+EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 689 MTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 748
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 749 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 808
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 809 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 868
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTR SGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 869 LAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 928
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 929 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPS 988
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 989 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1048
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L+SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1049 RLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1108
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1109 AHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1168
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELMSMAIAPRMLT
Sbjct: 1169 KLLFQELMSMAIAPRMLT 1186
>ref|XP_007025631.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma
cacao]
gb|EOY28253.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao]
Length = 1189
Score = 2180 bits (5648), Expect = 0.0
Identities = 1083/1158 (93%), Positives = 1108/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVG+HRNPDMLV+T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV AR+NP EAYS+TYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ +EAQGQA+RY++RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>ref|XP_021294485.1| DNA-directed RNA polymerase II subunit RPB2 [Herrania umbratica]
Length = 1189
Score = 2179 bits (5647), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1108/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVG+HRNPDMLV+T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRESP++GGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEEGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV AR+NP EAYS+TYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ +EAQGQA+RY++RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>ref|XP_021596788.1| DNA-directed RNA polymerase II subunit RPB2 [Manihot esculenta]
gb|OAY26185.1| hypothetical protein MANES_16G027100 [Manihot esculenta]
Length = 1192
Score = 2179 bits (5645), Expect = 0.0
Identities = 1084/1158 (93%), Positives = 1105/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 81 FAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHRNPDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I+DLV ARLNP EAY+DTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ ++AQGQ+ARYT+RDHS SLRHSETG+VDQVLLTTNAD
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQEDAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 980
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 981 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1040
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1041 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1100
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1101 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1160
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1161 KLLFQELMAMAIAPRMLT 1178
>ref|XP_015889960.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ziziphus
jujuba]
Length = 1191
Score = 2178 bits (5644), Expect = 0.0
Identities = 1086/1159 (93%), Positives = 1105/1159 (95%), Gaps = 6/1159 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 78
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 79 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 138
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 139 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 258
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIR EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 259 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFTDTQMMELLRPSLEEAFVIQNQQ 318
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 319 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 379 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 438
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 499 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 558
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNGCWVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 559 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 618
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLV+KG
Sbjct: 619 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 678
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV AR+NP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 679 MTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 738
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 739 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 798
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 799 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 858
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAA-RYTKRDHSTSLRHSETGMVDQVLLTTNA 1221
LAPPGTRVSGEDVIIGKTTPIA DEAQGQAA RYT+RDHS SLRHSETG+VDQVLLTTNA
Sbjct: 859 LAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSISLRHSETGIVDQVLLTTNA 918
Query: 1220 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIP 1041
DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIP
Sbjct: 919 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 978
Query: 1040 SRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 861
SRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALH+CGYQMRGFETMYNGHTG
Sbjct: 979 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHRCGYQMRGFETMYNGHTG 1038
Query: 860 RKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 681
R+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1039 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1098
Query: 680 IAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 501
IAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA
Sbjct: 1099 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 1158
Query: 500 CKLLFQELMSMAIAPRMLT 444
CKLLFQELM+MAIAPRMLT
Sbjct: 1159 CKLLFQELMAMAIAPRMLT 1177
>gb|PNT39531.1| hypothetical protein POPTR_004G043200v3 [Populus trichocarpa]
Length = 1198
Score = 2176 bits (5638), Expect = 0.0
Identities = 1083/1158 (93%), Positives = 1105/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 27 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 86
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 87 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 146
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 147 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 206
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 207 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 266
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 267 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 326
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 327 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 386
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 387 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 446
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 447 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 506
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 507 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 566
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 567 SPAVIPQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 626
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQ+LLI+KKDI ALQQRE+PD+GGWHDLV+KG
Sbjct: 627 YGRCSRPLFIVEKQKLLIRKKDIHALQQRETPDEGGWHDLVSKGFIEYIDTEEEETTMIS 686
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
I+DLV AR+NP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 687 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 746
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 747 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 806
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 807 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 866
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHSETGMVDQVLLTTNAD
Sbjct: 867 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGMVDQVLLTTNAD 926
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 927 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 986
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 987 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1046
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1047 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1106
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1107 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1166
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1167 KLLFQELMAMAIAPRMLT 1184
>ref|XP_019266160.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nicotiana
attenuata]
gb|OIT05504.1| dna-directed rna polymerase ii subunit rpb2 [Nicotiana attenuata]
Length = 1191
Score = 2175 bits (5637), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1106/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG+GEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV ARLNP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 2175 bits (5637), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1106/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG+GEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV ARLNP EAYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
sp|Q42877.1|RPB2_SOLLC RecName: Full=DNA-directed RNA polymerase II subunit RPB2; Short=RNA
polymerase II subunit 2; Short=RNA polymerase II subunit
B2; AltName: Full=DNA-directed RNA polymerase II 135 kDa
polypeptide
gb|AAC49273.1| RNA polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2175 bits (5637), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1105/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMA+TQNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV ARLNP +AYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>ref|XP_015066015.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
pennellii]
Length = 1191
Score = 2175 bits (5636), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1104/1158 (95%), Gaps = 5/1158 (0%)
Frame = -1
Query: 3902 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 3723
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3722 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIRKGHD 3543
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI+KGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3542 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3363
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3362 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 3183
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMA+TQNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3182 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 3003
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 3002 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2823
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2822 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 2643
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2642 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2463
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2462 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2283
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2282 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXRVDVNTEVGVVRDIRLKELRIYTD 2103
SPAVIPQATKIFVNG WVGIHR+PDMLV T RVDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2102 YGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXXXXXXXXXXXXX 1923
YGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG
Sbjct: 620 YGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1922 XXINDLVSARLNPSEAYSDTYTHCEIHPSLIL-----XXXXXXXXXXXXXTYQSAMGKQA 1758
INDLV ARLNP +AYSDTYTHCEIHPSLIL TYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1757 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1578
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1577 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 1398
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDG 859
Query: 1397 LAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNAD 1218
LAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 1217 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPS 1038
GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 1037 RMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 858
RMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 857 KLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 678
+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 677 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 498
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 497 KLLFQELMSMAIAPRMLT 444
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177