BLASTX nr result

ID: Rehmannia30_contig00001311 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00001311
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022008720.1| 50S ribosomal protein L13, chloroplastic-lik...   169   2e-50
gb|PIN15940.1| Mitochondrial/chloroplast ribosomal protein L13 [...   169   4e-50
ref|XP_011098188.1| 50S ribosomal protein L13, chloroplastic [Se...   169   4e-50
ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloro...   167   1e-49
ref|NP_001310974.1| 50S ribosomal protein L13, chloroplastic [So...   167   1e-49
gb|OTG30075.1| putative ribosomal protein L13 [Helianthus annuus]     167   1e-49
ref|XP_023750607.1| 50S ribosomal protein L13, chloroplastic [La...   167   2e-49
dbj|GAV60687.1| Ribosomal_L13 domain-containing protein [Cephalo...   167   2e-49
gb|PHU07449.1| 50S ribosomal protein L13, chloroplastic [Capsicu...   166   3e-49
gb|PHT51673.1| 50S ribosomal protein L13, chloroplastic [Capsicu...   166   3e-49
ref|XP_016541611.1| PREDICTED: 50S ribosomal protein L13, chloro...   166   3e-49
gb|PKI54270.1| hypothetical protein CRG98_025330 [Punica granatum]    161   5e-49
ref|XP_019232818.1| PREDICTED: 50S ribosomal protein L13, chloro...   166   5e-49
ref|XP_016506484.1| PREDICTED: 50S ribosomal protein L13, chloro...   166   5e-49
ref|XP_009786256.1| PREDICTED: 50S ribosomal protein L13, chloro...   166   5e-49
ref|XP_022877334.1| 50S ribosomal protein L13, chloroplastic-lik...   166   7e-49
ref|XP_021999951.1| 50S ribosomal protein L13, chloroplastic-lik...   165   7e-49
ref|XP_021656249.1| 50S ribosomal protein L13, chloroplastic-lik...   166   8e-49
ref|XP_008463780.1| PREDICTED: 50S ribosomal protein L13, chloro...   166   9e-49
ref|XP_010060757.1| PREDICTED: 50S ribosomal protein L13, chloro...   165   1e-48

>ref|XP_022008720.1| 50S ribosomal protein L13, chloroplastic-like [Helianthus annuus]
 gb|OTF96983.1| putative ribosomal protein L13 family protein [Helianthus annuus]
          Length = 231

 Score =  169 bits (429), Expect = 2e-50
 Identities = 79/85 (92%), Positives = 83/85 (97%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVYT
Sbjct: 147 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYT 206

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQT 160
           GPDHPH+AQKP++LPIRDKRIQKQT
Sbjct: 207 GPDHPHQAQKPIDLPIRDKRIQKQT 231


>gb|PIN15940.1| Mitochondrial/chloroplast ribosomal protein L13 [Handroanthus
           impetiginosus]
          Length = 233

 Score =  169 bits (427), Expect = 4e-50
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQKRIPERIIEHAVRGMLPKGRLGR+LF HLKVYT
Sbjct: 149 KKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRLGRALFNHLKVYT 208

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQT 160
           GP+HPHEAQKPVELPIRDKRIQK+T
Sbjct: 209 GPNHPHEAQKPVELPIRDKRIQKRT 233


>ref|XP_011098188.1| 50S ribosomal protein L13, chloroplastic [Sesamum indicum]
          Length = 234

 Score =  169 bits (427), Expect = 4e-50
 Identities = 80/84 (95%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLF HLKVYT
Sbjct: 150 KKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFNHLKVYT 209

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GPDHPH AQKP+ELPIRDKRIQKQ
Sbjct: 210 GPDHPHAAQKPIELPIRDKRIQKQ 233


>ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
           tuberosum]
          Length = 229

 Score =  167 bits (423), Expect = 1e-49
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 145 KKRSQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 204

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 205 GPEHPHEAQKPVELPIRDKRIQKQ 228


>ref|NP_001310974.1| 50S ribosomal protein L13, chloroplastic [Solanum lycopersicum]
 ref|XP_015061102.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
           pennellii]
          Length = 229

 Score =  167 bits (423), Expect = 1e-49
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 145 KKRSQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 204

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 205 GPEHPHEAQKPVELPIRDKRIQKQ 228


>gb|OTG30075.1| putative ribosomal protein L13 [Helianthus annuus]
          Length = 241

 Score =  167 bits (424), Expect = 1e-49
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KK TQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVYT
Sbjct: 157 KKETQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYT 216

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQT 160
           GPDHPH+AQKP++LPIRDKRIQKQT
Sbjct: 217 GPDHPHQAQKPIDLPIRDKRIQKQT 241


>ref|XP_023750607.1| 50S ribosomal protein L13, chloroplastic [Lactuca sativa]
 gb|PLY95463.1| hypothetical protein LSAT_9X100460 [Lactuca sativa]
          Length = 237

 Score =  167 bits (423), Expect = 2e-49
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKR QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 153 KKRLQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYE 212

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQT 160
           GPDHPH+AQKP++LPIRDKRIQKQT
Sbjct: 213 GPDHPHQAQKPIDLPIRDKRIQKQT 237


>dbj|GAV60687.1| Ribosomal_L13 domain-containing protein [Cephalotus follicularis]
          Length = 231

 Score =  167 bits (422), Expect = 2e-49
 Identities = 79/83 (95%), Positives = 81/83 (97%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY 
Sbjct: 147 KKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYK 206

Query: 234 GPDHPHEAQKPVELPIRDKRIQK 166
           GPDHPHEAQKPVELPIRDKRIQK
Sbjct: 207 GPDHPHEAQKPVELPIRDKRIQK 229


>gb|PHU07449.1| 50S ribosomal protein L13, chloroplastic [Capsicum chinense]
          Length = 239

 Score =  166 bits (421), Expect = 3e-49
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 155 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 214

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 215 GPEHPHEAQKPVELPIRDKRIQKQ 238


>gb|PHT51673.1| 50S ribosomal protein L13, chloroplastic [Capsicum baccatum]
          Length = 239

 Score =  166 bits (421), Expect = 3e-49
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 155 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 214

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 215 GPEHPHEAQKPVELPIRDKRIQKQ 238


>ref|XP_016541611.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Capsicum
           annuum]
 gb|PHT73050.1| 50S ribosomal protein L13 [Capsicum annuum]
          Length = 239

 Score =  166 bits (421), Expect = 3e-49
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 155 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 214

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 215 GPEHPHEAQKPVELPIRDKRIQKQ 238


>gb|PKI54270.1| hypothetical protein CRG98_025330 [Punica granatum]
          Length = 102

 Score =  161 bits (408), Expect = 5e-49
 Identities = 77/84 (91%), Positives = 80/84 (95%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETF+QLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY 
Sbjct: 18  KKRTQKLYRRHSGRPGGMKVETFNQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYK 77

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           G DHPHEAQKPVELPIRDKRIQKQ
Sbjct: 78  GSDHPHEAQKPVELPIRDKRIQKQ 101


>ref|XP_019232818.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Nicotiana
           attenuata]
 gb|OIT27795.1| 50s ribosomal protein l13, chloroplastic [Nicotiana attenuata]
          Length = 241

 Score =  166 bits (420), Expect = 5e-49
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 157 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 216

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKP+ELPIRDKRIQKQ
Sbjct: 217 GPEHPHEAQKPIELPIRDKRIQKQ 240


>ref|XP_016506484.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Nicotiana
           tabacum]
          Length = 241

 Score =  166 bits (420), Expect = 5e-49
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 157 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 216

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKP+ELPIRDKRIQKQ
Sbjct: 217 GPEHPHEAQKPIELPIRDKRIQKQ 240


>ref|XP_009786256.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Nicotiana
           sylvestris]
          Length = 241

 Score =  166 bits (420), Expect = 5e-49
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY 
Sbjct: 157 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYK 216

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP+HPHEAQKP+ELPIRDKRIQKQ
Sbjct: 217 GPEHPHEAQKPIELPIRDKRIQKQ 240


>ref|XP_022877334.1| 50S ribosomal protein L13, chloroplastic-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022877335.1| 50S ribosomal protein L13, chloroplastic-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 238

 Score =  166 bits (419), Expect = 7e-49
 Identities = 79/84 (94%), Positives = 80/84 (95%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQKRIPERIIEHAVRGMLPKGRLGR+LF HLKVYT
Sbjct: 154 KKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRLGRALFNHLKVYT 213

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GP HPHEAQKPVELPIRDKRI KQ
Sbjct: 214 GPSHPHEAQKPVELPIRDKRITKQ 237


>ref|XP_021999951.1| 50S ribosomal protein L13, chloroplastic-like isoform X1
           [Helianthus annuus]
 gb|OTG00322.1| putative ribosomal protein L13 [Helianthus annuus]
          Length = 216

 Score =  165 bits (417), Expect = 7e-49
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VET DQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVYT
Sbjct: 132 KKRTQKLYRRHSGRPGGMKVETLDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYT 191

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQT 160
           GPDHPH+AQ P++LPIRDKRIQKQT
Sbjct: 192 GPDHPHQAQTPIDLPIRDKRIQKQT 216


>ref|XP_021656249.1| 50S ribosomal protein L13, chloroplastic-like [Hevea brasiliensis]
          Length = 255

 Score =  166 bits (420), Expect = 8e-49
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY 
Sbjct: 171 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYK 230

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GPDHPHEAQKP+ELPIRDKRIQKQ
Sbjct: 231 GPDHPHEAQKPIELPIRDKRIQKQ 254


>ref|XP_008463780.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]
          Length = 248

 Score =  166 bits (419), Expect = 9e-49
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY 
Sbjct: 164 KKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYK 223

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQ 163
           GPDHPHEAQKPVELPIRDKRI K+
Sbjct: 224 GPDHPHEAQKPVELPIRDKRINKE 247


>ref|XP_010060757.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Eucalyptus
           grandis]
 gb|KCW67611.1| hypothetical protein EUGRSUZ_F01365 [Eucalyptus grandis]
          Length = 240

 Score =  165 bits (418), Expect = 1e-48
 Identities = 77/85 (90%), Positives = 82/85 (96%)
 Frame = -3

Query: 414 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 235
           KKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY 
Sbjct: 156 KKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYK 215

Query: 234 GPDHPHEAQKPVELPIRDKRIQKQT 160
           GP+HPH+AQKP+ELPIRDKRIQKQT
Sbjct: 216 GPEHPHDAQKPIELPIRDKRIQKQT 240


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