BLASTX nr result

ID: Rehmannia29_contig00038404 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00038404
         (658 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON86642.1| hypothetical protein TorRG33x02_175780 [Trema ori...    54   3e-06

>gb|PON86642.1| hypothetical protein TorRG33x02_175780 [Trema orientalis]
          Length = 100

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = +1

Query: 391 ERDKRFFDDMEEYLEEVWYRIKFRAAWWIPNHNEFKNLFVSDLVRDWS 534
           ER+KR FDD +E L  +W ++K+  A W+ +   FK+L  SDL RDWS
Sbjct: 50  ERNKRIFDDAKEDLNSIWEKVKYLVALWVYDTRFFKDLSFSDLCRDWS 97


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