BLASTX nr result
ID: Rehmannia29_contig00024452
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00024452
(428 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011081405.1| DNA mismatch repair protein MSH4 [Sesamum in... 50 2e-09
gb|PIN09212.1| Mismatch repair ATPase MSH4 (MutS family) [Handro... 50 2e-09
gb|KZV50718.1| hypothetical protein F511_19630 [Dorcoceras hygro... 50 4e-09
ref|XP_012827351.1| PREDICTED: DNA mismatch repair protein MSH4 ... 49 5e-09
ref|XP_012827352.1| PREDICTED: DNA mismatch repair protein MSH4 ... 49 5e-09
ref|XP_012827353.1| PREDICTED: DNA mismatch repair protein MSH4 ... 49 5e-09
ref|XP_022154824.1| DNA mismatch repair protein MSH4 [Momordica ... 49 2e-08
ref|XP_023521478.1| DNA mismatch repair protein MSH4-like [Cucur... 49 2e-08
ref|XP_022996171.1| DNA mismatch repair protein MSH4 [Cucurbita ... 49 2e-08
ref|XP_022957703.1| DNA mismatch repair protein MSH4 [Cucurbita ... 49 2e-08
ref|XP_006358345.1| PREDICTED: DNA mismatch repair protein MSH4 ... 49 2e-08
gb|KVH95538.1| DNA mismatch repair protein MutS, clamp [Cynara c... 48 1e-07
ref|XP_004511707.1| PREDICTED: DNA mismatch repair protein MSH4 ... 46 1e-07
ref|XP_004244563.1| PREDICTED: DNA mismatch repair protein MSH4 ... 46 1e-07
ref|XP_010667038.1| PREDICTED: DNA mismatch repair protein MSH4 ... 49 1e-07
ref|XP_010324586.1| PREDICTED: DNA mismatch repair protein MSH4 ... 46 1e-07
ref|XP_012574401.1| PREDICTED: DNA mismatch repair protein MSH4 ... 46 1e-07
ref|XP_012574402.1| PREDICTED: DNA mismatch repair protein MSH4 ... 46 1e-07
ref|XP_010324587.1| PREDICTED: DNA mismatch repair protein MSH4 ... 46 1e-07
ref|XP_019103075.1| PREDICTED: DNA mismatch repair protein MSH4 ... 49 1e-07
>ref|XP_011081405.1| DNA mismatch repair protein MSH4 [Sesamum indicum]
Length = 792
Score = 49.7 bits (117), Expect(2) = 2e-09
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIVVDELGRATSSSDGFAIAWS
Sbjct: 626 RSLIVVDELGRATSSSDGFAIAWS 649
Score = 39.7 bits (91), Expect(2) = 2e-09
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQNASHR
Sbjct: 609 FMTEMKETAFILQNASHR 626
>gb|PIN09212.1| Mismatch repair ATPase MSH4 (MutS family) [Handroanthus
impetiginosus]
Length = 719
Score = 49.7 bits (117), Expect(2) = 2e-09
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIVVDELGRATSSSDGFAIAWS
Sbjct: 553 RSLIVVDELGRATSSSDGFAIAWS 576
Score = 39.7 bits (91), Expect(2) = 2e-09
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQNASHR
Sbjct: 536 FMTEMKETAFILQNASHR 553
>gb|KZV50718.1| hypothetical protein F511_19630 [Dorcoceras hygrometricum]
Length = 329
Score = 49.7 bits (117), Expect(2) = 4e-09
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIVVDELGRATSSSDGFAIAWS
Sbjct: 159 RSLIVVDELGRATSSSDGFAIAWS 182
Score = 38.9 bits (89), Expect(2) = 4e-09
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QNASHR
Sbjct: 142 FMTEMKETAFIMQNASHR 159
>ref|XP_012827351.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Erythranthe
guttata]
Length = 817
Score = 48.5 bits (114), Expect(2) = 5e-09
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIVVDELGRATSSSDGFAI+WS
Sbjct: 651 RSLIVVDELGRATSSSDGFAISWS 674
Score = 39.7 bits (91), Expect(2) = 5e-09
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQNASHR
Sbjct: 634 FMTEMKETAFILQNASHR 651
>ref|XP_012827352.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X2 [Erythranthe
guttata]
gb|EYU19312.1| hypothetical protein MIMGU_mgv1a001574mg [Erythranthe guttata]
Length = 792
Score = 48.5 bits (114), Expect(2) = 5e-09
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIVVDELGRATSSSDGFAI+WS
Sbjct: 626 RSLIVVDELGRATSSSDGFAISWS 649
Score = 39.7 bits (91), Expect(2) = 5e-09
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQNASHR
Sbjct: 609 FMTEMKETAFILQNASHR 626
>ref|XP_012827353.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X3 [Erythranthe
guttata]
Length = 653
Score = 48.5 bits (114), Expect(2) = 5e-09
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIVVDELGRATSSSDGFAI+WS
Sbjct: 487 RSLIVVDELGRATSSSDGFAISWS 510
Score = 39.7 bits (91), Expect(2) = 5e-09
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQNASHR
Sbjct: 470 FMTEMKETAFILQNASHR 487
>ref|XP_022154824.1| DNA mismatch repair protein MSH4 [Momordica charantia]
Length = 793
Score = 49.3 bits (116), Expect(2) = 2e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSL+VVDELGRATSSSDGFAIAWS
Sbjct: 626 RSLVVVDELGRATSSSDGFAIAWS 649
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAF++QN SHR
Sbjct: 609 FMTEMKETAFVMQNVSHR 626
>ref|XP_023521478.1| DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo]
ref|XP_023532701.1| DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo]
Length = 792
Score = 49.3 bits (116), Expect(2) = 2e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSL+VVDELGRATSSSDGFAIAWS
Sbjct: 626 RSLVVVDELGRATSSSDGFAIAWS 649
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAF++QN SHR
Sbjct: 609 FMTEMKETAFVMQNVSHR 626
>ref|XP_022996171.1| DNA mismatch repair protein MSH4 [Cucurbita maxima]
Length = 792
Score = 49.3 bits (116), Expect(2) = 2e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSL+VVDELGRATSSSDGFAIAWS
Sbjct: 626 RSLVVVDELGRATSSSDGFAIAWS 649
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAF++QN SHR
Sbjct: 609 FMTEMKETAFVMQNVSHR 626
>ref|XP_022957703.1| DNA mismatch repair protein MSH4 [Cucurbita moschata]
Length = 792
Score = 49.3 bits (116), Expect(2) = 2e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSL+VVDELGRATSSSDGFAIAWS
Sbjct: 626 RSLVVVDELGRATSSSDGFAIAWS 649
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAF++QN SHR
Sbjct: 609 FMTEMKETAFVMQNVSHR 626
>ref|XP_006358345.1| PREDICTED: DNA mismatch repair protein MSH4 [Solanum tuberosum]
Length = 792
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDGFAIAWS
Sbjct: 626 RSLIVMDELGRATSSSDGFAIAWS 649
Score = 37.4 bits (85), Expect(2) = 2e-08
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 609 FMTEMKETAFIMQNVSHR 626
>gb|KVH95538.1| DNA mismatch repair protein MutS, clamp [Cynara cardunculus var.
scolymus]
Length = 868
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSL+V+DELGRATSSSDGFAIAWS
Sbjct: 679 RSLVVMDELGRATSSSDGFAIAWS 702
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQN+S R
Sbjct: 662 FMTEMKETAFILQNSSER 679
>ref|XP_004511707.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Cicer
arietinum]
Length = 792
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDG AIAWS
Sbjct: 626 RSLIVMDELGRATSSSDGLAIAWS 649
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 609 FMTEMKETAFIMQNVSHR 626
>ref|XP_004244563.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Solanum
lycopersicum]
ref|XP_010324585.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Solanum
lycopersicum]
Length = 792
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDG AIAWS
Sbjct: 626 RSLIVMDELGRATSSSDGLAIAWS 649
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 609 FMTEMKETAFIMQNVSHR 626
>ref|XP_010667038.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Beta
vulgaris subsp. vulgaris]
Length = 790
Score = 48.5 bits (114), Expect(2) = 1e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDGFAIAWS
Sbjct: 624 RSLIVMDELGRATSSSDGFAIAWS 647
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQN S R
Sbjct: 607 FMTEMKETAFILQNVSQR 624
>ref|XP_010324586.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X2 [Solanum
lycopersicum]
Length = 780
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDG AIAWS
Sbjct: 614 RSLIVMDELGRATSSSDGLAIAWS 637
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 597 FMTEMKETAFIMQNVSHR 614
>ref|XP_012574401.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X2 [Cicer
arietinum]
Length = 777
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDG AIAWS
Sbjct: 611 RSLIVMDELGRATSSSDGLAIAWS 634
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 594 FMTEMKETAFIMQNVSHR 611
>ref|XP_012574402.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X3 [Cicer
arietinum]
Length = 772
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDG AIAWS
Sbjct: 606 RSLIVMDELGRATSSSDGLAIAWS 629
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 589 FMTEMKETAFIMQNVSHR 606
>ref|XP_010324587.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X3 [Solanum
lycopersicum]
Length = 722
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDG AIAWS
Sbjct: 556 RSLIVMDELGRATSSSDGLAIAWS 579
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFI+QN SHR
Sbjct: 539 FMTEMKETAFIMQNVSHR 556
>ref|XP_019103075.1| PREDICTED: DNA mismatch repair protein MSH4 isoform X3 [Beta
vulgaris subsp. vulgaris]
Length = 663
Score = 48.5 bits (114), Expect(2) = 1e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 72 RSLIVVDELGRATSSSDGFAIAWS 1
RSLIV+DELGRATSSSDGFAIAWS
Sbjct: 497 RSLIVMDELGRATSSSDGFAIAWS 520
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 209 FMTEMKETAFILQNASHR 156
FMTEMKETAFILQN S R
Sbjct: 480 FMTEMKETAFILQNVSQR 497