BLASTX nr result

ID: Rehmannia28_contig00052921 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00052921
         (342 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]   172   4e-48
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   166   2e-45
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]   159   2e-43
gb|KYP35109.1| Retrovirus-related Pol polyprotein from transposo...   150   2e-42
gb|KYP63543.1| Retrovirus-related Pol polyprotein from transposo...   150   3e-42
gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposo...   151   3e-40
gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposo...   151   3e-40
gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposo...   151   3e-40
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo...   151   3e-40
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   149   2e-39
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              147   4e-39
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868...   146   1e-38
gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Ar...   145   2e-38
gb|KYP58488.1| Retrovirus-related Pol polyprotein from transposo...   144   4e-38
emb|CDY58610.1| BnaCnng33390D [Brassica napus]                        144   5e-38
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...   144   5e-38
ref|XP_010545858.1| PREDICTED: uncharacterized protein LOC104818...   143   1e-37
ref|XP_010507647.1| PREDICTED: uncharacterized protein LOC104784...   143   1e-37
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   142   4e-37
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   141   8e-37

>emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]
          Length = 731

 Score =  172 bits (436), Expect = 4e-48
 Identities = 77/113 (68%), Positives = 97/113 (85%)
 Frame = -2

Query: 341 SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
           SS L +FSCNAC  NKSHKLSF+ ST+ S+ PL++++SDVWTSP+IS DGFKYYVIFVDH
Sbjct: 314 SSSLLHFSCNACHCNKSHKLSFSNSTINSSHPLQILYSDVWTSPIISYDGFKYYVIFVDH 373

Query: 161 YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           +TKYIW YPL+QKS+V +IF RFK IVE +F++ I  L+SDNGGEYI+++NFL
Sbjct: 374 FTKYIWFYPLKQKSQVKDIFIRFKAIVEKHFNQNIHTLYSDNGGEYISLSNFL 426


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  166 bits (419), Expect = 2e-45
 Identities = 74/113 (65%), Positives = 96/113 (84%)
 Frame = -2

Query: 341 SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
           SS L +FSCN C  NKSHKLSF+ ST+ S++PL++++SDVWTSP+IS DGFKYYVIFVD+
Sbjct: 390 SSSLLHFSCNTCHCNKSHKLSFSNSTINSSRPLQILYSDVWTSPIISYDGFKYYVIFVDY 449

Query: 161 YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           +TKYIW YPL+Q S+V +IF RFK IVE +F++ I  L+SDNGGEYI+++NFL
Sbjct: 450 FTKYIWFYPLKQISQVKDIFIRFKAIVEKHFNQNIHTLYSDNGGEYISLSNFL 502


>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
          Length = 786

 Score =  159 bits (403), Expect = 2e-43
 Identities = 73/113 (64%), Positives = 92/113 (81%)
 Frame = -2

Query: 341 SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
           SS++++F CN C  NK+HKL F+ ST+VS+QPLE+IFSDVWTS VIS++GFK YVIFVDH
Sbjct: 187 SSLISDFLCNVCHYNKNHKLPFSTSTVVSSQPLEIIFSDVWTSLVISHNGFKNYVIFVDH 246

Query: 161 YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           +TKYIW Y  +QKSEV ++F RFK IVE +F  KI  L+SDNGGEY+A+  FL
Sbjct: 247 FTKYIWFYSFQQKSEVKDVFIRFKAIVETHFQNKIHTLYSDNGGEYLALRTFL 299


>gb|KYP35109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 321

 Score =  150 bits (378), Expect = 2e-42
 Identities = 64/105 (60%), Positives = 86/105 (81%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S+ PLE+IFSDVWTSPV+S DG +YY +FVDH+T+YIWLY
Sbjct: 194 CNSCQISKSHKLPFHESTLKSSYPLEIIFSDVWTSPVLSIDGLRYYCMFVDHFTRYIWLY 253

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           P+R+KS+V  +F +FK++VEN+F   IK+ ++DNGGEYI +  FL
Sbjct: 254 PIRRKSDVQTLFPKFKSLVENFFHHNIKIFYTDNGGEYIGLRLFL 298


>gb|KYP63543.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 373

 Score =  150 bits (380), Expect = 3e-42
 Identities = 64/105 (60%), Positives = 87/105 (82%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S+ PLE+IFSDVWTSPV+S DG +YY +FVDH+T+YIWLY
Sbjct: 49  CNSCQISKSHKLPFHESTLKSSYPLEIIFSDVWTSPVLSIDGLRYYCMFVDHFTRYIWLY 108

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           P+++KS+V  +F +FK++VEN+F   IK+L++DNGGEYI +  FL
Sbjct: 109 PIKRKSDVQTLFPKFKSLVENFFHHNIKILYTDNGGEYIGLRPFL 153


>gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1235

 Score =  151 bits (381), Expect = 3e-40
 Identities = 64/105 (60%), Positives = 87/105 (82%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S  PLE+IFSDVWTSP++S DG +YY +FVDH+T+YIWLY
Sbjct: 398 CNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLRYYCMFVDHFTRYIWLY 457

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           P+++KS+V  IF +FK++VEN++  KIK+L++DNGGEYI +  FL
Sbjct: 458 PMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPFL 502


>gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1237

 Score =  151 bits (381), Expect = 3e-40
 Identities = 64/105 (60%), Positives = 87/105 (82%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S  PLE+IFSDVWTSP++S DG +YY +FVDH+T+YIWLY
Sbjct: 400 CNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLRYYCMFVDHFTRYIWLY 459

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           P+++KS+V  IF +FK++VEN++  KIK+L++DNGGEYI +  FL
Sbjct: 460 PMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPFL 504


>gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1248

 Score =  151 bits (381), Expect = 3e-40
 Identities = 64/105 (60%), Positives = 87/105 (82%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S  PLE+IFSDVWTSP++S DG +YY +FVDH+T+YIWLY
Sbjct: 400 CNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLRYYCMFVDHFTRYIWLY 459

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           P+++KS+V  IF +FK++VEN++  KIK+L++DNGGEYI +  FL
Sbjct: 460 PMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPFL 504


>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Glycine soja]
          Length = 1294

 Score =  151 bits (381), Expect = 3e-40
 Identities = 64/105 (60%), Positives = 87/105 (82%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S  PLE+IFSDVWTSP++S DG +YY +FVDH+T+YIWLY
Sbjct: 411 CNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLRYYCMFVDHFTRYIWLY 470

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           P+++KS+V  IF +FK++VEN++  KIK+L++DNGGEYI +  FL
Sbjct: 471 PMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPFL 515


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
           gi|225898008|dbj|BAH30336.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1459

 Score =  149 bits (375), Expect = 2e-39
 Identities = 66/106 (62%), Positives = 85/106 (80%)
 Frame = -2

Query: 320 SCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWL 141
           SC+ CL NKSHKL FA S++ S+ PLE IF+DVWTSP+IS+D +KYY++ VDHYT+Y WL
Sbjct: 505 SCSDCLINKSHKLPFATSSIHSSSPLEYIFTDVWTSPIISHDNYKYYLVLVDHYTRYTWL 564

Query: 140 YPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           YPL+QKS+V   F  FK +VEN F  KI+ L+SDNGGE+IA+ +FL
Sbjct: 565 YPLQQKSQVKATFIAFKALVENRFQAKIRTLYSDNGGEFIALRDFL 610


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  147 bits (372), Expect = 4e-39
 Identities = 66/108 (61%), Positives = 82/108 (75%)
 Frame = -2

Query: 326 NFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYI 147
           +F C+ CL NKSHKL F  +T++S  PLE ++SDVWTSPV S D FKYY+I VDHYT+Y 
Sbjct: 590 HFPCSHCLINKSHKLPFYSNTIISYTPLEYVYSDVWTSPVTSVDNFKYYLILVDHYTRYT 649

Query: 146 WLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           WLYPL+QKS+V   F  FK +VEN F  KI+ L+SDNGGE+IA+  FL
Sbjct: 650 WLYPLKQKSQVRETFVAFKALVENRFQTKIRTLYSDNGGEFIALRQFL 697


>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
          Length = 2690

 Score =  146 bits (368), Expect = 1e-38
 Identities = 64/113 (56%), Positives = 86/113 (76%)
 Frame = -2

Query: 341  SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
            S  +  FSC  CL+NKSHKL F  +T+ S +PL+ ++SDVWTSP++S+D +KYY+IFVDH
Sbjct: 1176 SDSIKQFSCVDCLTNKSHKLPFHTNTIKSDKPLQYLYSDVWTSPIVSSDHYKYYLIFVDH 1235

Query: 161  YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
            +T+Y WLYPL+QKS+V   F  FK +VEN F  +I  L+SDNGGEYI + +FL
Sbjct: 1236 FTRYTWLYPLKQKSQVRETFIAFKALVENRFKTRIVTLYSDNGGEYIGLRSFL 1288


>gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
          Length = 2090

 Score =  145 bits (367), Expect = 2e-38
 Identities = 63/106 (59%), Positives = 85/106 (80%)
 Frame = -2

Query: 320 SCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWL 141
           SC+ C  NK+HK+ F+KST+ S++PLE I+SDVW+SP++S + FKYY+IFVDHYT+Y WL
Sbjct: 514 SCSDCFINKTHKIPFSKSTITSSKPLEYIYSDVWSSPILSLENFKYYLIFVDHYTRYTWL 573

Query: 140 YPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           YPL+ KS+V + F  FK++VEN F  +I  L+SDNGGEYIA+  FL
Sbjct: 574 YPLKLKSQVKDTFIAFKSLVENRFQTRIGTLYSDNGGEYIALRGFL 619



 Score =  129 bits (324), Expect = 1e-32
 Identities = 59/106 (55%), Positives = 79/106 (74%)
 Frame = -2

Query: 320  SCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWL 141
            SC+ C  NK+HK+ F+KST+ S++PLE I+SDVW+S +       YY+IFVDHYT+Y WL
Sbjct: 1574 SCSDCFINKTHKIPFSKSTITSSKPLEYIYSDVWSSHI-------YYLIFVDHYTRYTWL 1626

Query: 140  YPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
            YPL+ KS+V + F  FK++VEN F  +I  L+SDNGGEYIA+  FL
Sbjct: 1627 YPLKLKSQVKDTFIAFKSLVENRFQTRIGTLYSDNGGEYIALRGFL 1672


>gb|KYP58488.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 625

 Score =  144 bits (362), Expect = 4e-38
 Identities = 60/98 (61%), Positives = 82/98 (83%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           CN+C  +KSHKL F +STL S+ PLE+IFSDVWTSPV+S DG +YY +FVDH+T+YIWLY
Sbjct: 128 CNSCQISKSHKLPFHESTLKSSYPLEIIFSDVWTSPVLSIDGLRYYCMFVDHFTRYIWLY 187

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEY 24
           P+++KS+V  +F +FK++ EN+F   IK+L++DNGGEY
Sbjct: 188 PIKRKSDVQTLFPKFKSLFENFFHHNIKILYTDNGGEY 225


>emb|CDY58610.1| BnaCnng33390D [Brassica napus]
          Length = 856

 Score =  144 bits (364), Expect = 5e-38
 Identities = 64/105 (60%), Positives = 82/105 (78%)
 Frame = -2

Query: 317 CNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWLY 138
           C+ CL NKSHKL F  +T+ S +PLE ++SDVWTSP+IS D FKYY++FVDHYT+Y WLY
Sbjct: 281 CSHCLINKSHKLPFYSNTIHSQKPLEYVYSDVWTSPLISVDNFKYYLVFVDHYTRYTWLY 340

Query: 137 PLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           PL+QKS+V + F  FK IVEN F  K+  L+S+NGGE+IA+  FL
Sbjct: 341 PLKQKSQVRDTFIAFKAIVENRFQTKLMTLYSENGGEFIALRQFL 385


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score =  144 bits (364), Expect = 5e-38
 Identities = 62/113 (54%), Positives = 86/113 (76%)
 Frame = -2

Query: 341 SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
           +S+   F+C+ CL NK+HKL F  +T+ STQPLE ++ D+WTSP++S D FKYY++ VDH
Sbjct: 449 NSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDLWTSPIVSIDNFKYYLVIVDH 508

Query: 161 YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           YT+Y W YP++QKS V ++F  FK +V N F RKI  L+SDNGGE+IA+ +FL
Sbjct: 509 YTRYSWFYPIKQKSHVKDVFMTFKALVANKFQRKIIHLYSDNGGEFIALRSFL 561


>ref|XP_010545858.1| PREDICTED: uncharacterized protein LOC104818098, partial [Tarenaya
           hassleriana]
          Length = 883

 Score =  143 bits (361), Expect = 1e-37
 Identities = 63/113 (55%), Positives = 89/113 (78%)
 Frame = -2

Query: 341 SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
           SS   +F C  C  NKS+KLSF  S+++S++PLEV+FSDVW SP+ S +G++YYV+FVDH
Sbjct: 399 SSSSLSFHCEFCSINKSYKLSFFSSSVMSSRPLEVVFSDVWMSPIESFNGYRYYVVFVDH 458

Query: 161 YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           +T+Y WLYPL++KS V++IF RFK++VE  F  K+  L+SDN GEY+A+ N+L
Sbjct: 459 FTRYTWLYPLKRKSHVSDIFVRFKSLVETRFQSKLMSLYSDNDGEYVALKNYL 511


>ref|XP_010507647.1| PREDICTED: uncharacterized protein LOC104784298 [Camelina sativa]
          Length = 921

 Score =  143 bits (361), Expect = 1e-37
 Identities = 64/113 (56%), Positives = 83/113 (73%)
 Frame = -2

Query: 341 SSVLANFSCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDH 162
           SS  A  SC+ CL NK+HKLSFA S + S +PL+ +F+DVWTSPV S D FKYY+I VDH
Sbjct: 445 SSASAPLSCSECLLNKTHKLSFASSFITSVRPLQYLFTDVWTSPVASVDNFKYYLILVDH 504

Query: 161 YTKYIWLYPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           +T+Y W YPLR KS + ++F  FK +VEN+F    + L+SDNGGEYIA+  +L
Sbjct: 505 FTRYTWFYPLRNKSVIQSVFKAFKPLVENHFWETTQTLYSDNGGEYIALRGYL 557


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score =  142 bits (357), Expect = 4e-37
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = -2

Query: 320 SCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWL 141
           +C+ C  NKSHKL F+ S++ ST PLE IFSDVW SP++S D +KYY++ VDH+T+Y WL
Sbjct: 500 ACSDCFINKSHKLPFSISSIKSTSPLEYIFSDVWMSPILSPDNYKYYLVLVDHHTRYTWL 559

Query: 140 YPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           YPL+QKS+V + F  FK +VEN F  KI+ L+SDNGGE+IA+  FL
Sbjct: 560 YPLQQKSQVKSTFIAFKALVENRFQAKIRTLYSDNGGEFIALREFL 605


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  141 bits (355), Expect = 8e-37
 Identities = 59/106 (55%), Positives = 85/106 (80%)
 Frame = -2

Query: 320 SCNACLSNKSHKLSFAKSTLVSTQPLEVIFSDVWTSPVISNDGFKYYVIFVDHYTKYIWL 141
           SC+ C  NKSHK+ F+ ST+ S++PLE I+SDVW+SP++S D ++YYVIFVDH+T+Y WL
Sbjct: 352 SCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWL 411

Query: 140 YPLRQKSEVTNIFSRFKTIVENYFDRKIKVLFSDNGGEYIAMANFL 3
           YPL+QKS+V + F  FK++VEN F  +I  L+SDNGGE++ + ++L
Sbjct: 412 YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYL 457


Top