BLASTX nr result

ID: Rehmannia28_contig00052556 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00052556
         (544 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012477806.1| PREDICTED: uncharacterized protein LOC105793...    59   6e-08
ref|XP_012435561.1| PREDICTED: uncharacterized protein LOC105762...    60   1e-07
ref|XP_012490901.1| PREDICTED: uncharacterized protein LOC105803...    57   1e-06
ref|XP_012435565.1| PREDICTED: uncharacterized protein LOC105762...    55   2e-06
ref|XP_010674595.1| PREDICTED: uncharacterized protein LOC104890...    55   2e-06
ref|XP_010687190.1| PREDICTED: uncharacterized protein LOC104901...    53   5e-06
ref|XP_012468869.1| PREDICTED: uncharacterized protein LOC105786...    55   6e-06
ref|XP_002311007.1| hypothetical protein POPTR_0008s02040g [Popu...    55   8e-06

>ref|XP_012477806.1| PREDICTED: uncharacterized protein LOC105793440 [Gossypium
           raimondii]
          Length = 137

 Score = 58.5 bits (140), Expect = 6e-08
 Identities = 32/89 (35%), Positives = 49/89 (55%)
 Frame = +2

Query: 278 LSSIYANLSLNEDEKIQIHSDSLLMENIDGTLNLVGRVLAPRIIGFDSISSMFKRIWNPR 457
           +  + ANL L +D++  IH D   +EN    L LVGR L   ++ F S+ +    +W+P 
Sbjct: 1   MEDVLANLRLVDDDEEAIHEDVTAVENFS-QLCLVGRCLTDSVVHFPSLRNTMADLWHPI 59

Query: 458 HGLVCKPLGENTVLFQFSNLVDMKKVLNG 544
            G+    +GE   LFQF + VD+ +VL G
Sbjct: 60  GGICITDIGEKRYLFQFFHEVDIVRVLVG 88


>ref|XP_012435561.1| PREDICTED: uncharacterized protein LOC105762213 [Gossypium
           raimondii]
          Length = 342

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 49/89 (55%)
 Frame = +2

Query: 278 LSSIYANLSLNEDEKIQIHSDSLLMENIDGTLNLVGRVLAPRIIGFDSISSMFKRIWNPR 457
           +  + ANL L +DE+  IH D   +EN    L LVGR L   ++ F S+ +    +W+P 
Sbjct: 1   MEDVLANLRLVDDEEEAIHEDVTAVENFS-QLCLVGRCLTDNVVHFPSLRNTMADLWHPI 59

Query: 458 HGLVCKPLGENTVLFQFSNLVDMKKVLNG 544
            G+    +GE   LFQF + VD+ +VL G
Sbjct: 60  GGICITDIGEKRYLFQFFHEVDIVRVLVG 88


>ref|XP_012490901.1| PREDICTED: uncharacterized protein LOC105803321 [Gossypium
           raimondii]
          Length = 258

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = +2

Query: 293 ANLSLNEDEK--IQIHSDSLLMENIDGTLNLVGRVLAPRIIGFDSISSMFKRIWNPRHGL 466
           A+LS+NE+E+  +Q  +DS +  ++ G   LVG  L   II F ++ S    +W+P  G+
Sbjct: 6   AHLSINEEEEEILQTQADSRMQTDV-GDYQLVGCFLTASIINFLAMKSTLANLWHPICGV 64

Query: 467 VCKPLGENTVLFQFSNLVDMKKVLNG 544
             + LGE   LF+F + +DM++VL G
Sbjct: 65  QIRDLGEKMYLFKFFHSMDMERVLKG 90


>ref|XP_012435565.1| PREDICTED: uncharacterized protein LOC105762217 [Gossypium
           raimondii]
          Length = 148

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +2

Query: 293 ANLSL--NEDEKIQIHSDSLLMENIDGTLNLVGRVLAPRIIGFDSISSMFKRIWNPRHGL 466
           ANL++   E+E +Q   D   +E  +  L LVGRVL   ++ F S+ ++  ++W+P  G+
Sbjct: 9   ANLNIVDEEEEPVQTLEDGDTIEE-EYNLCLVGRVLTDSVVHFPSMRNILAKLWHPLEGI 67

Query: 467 VCKPLGENTVLFQFSNLVDMKKVLNG 544
               + E  +LF+F N +D+K+V +G
Sbjct: 68  SIMEIEEKRILFRFYNKIDLKRVWDG 93


>ref|XP_010674595.1| PREDICTED: uncharacterized protein LOC104890716 [Beta vulgaris
           subsp. vulgaris]
          Length = 193

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = +2

Query: 272 DALSSIYANLSLNEDEKIQIHSDSLLMENIDG--TLNLVGRVLAPRIIGFDSISSMFKRI 445
           + ++ + + L ++E+E+  +  DSL   N++   +L LVGR+L  R    ++       +
Sbjct: 3   EEIADVVSKLRIDEEEEHVLDLDSL-NPNLENPVSLLLVGRLLTDRSFNVEAFKRTITTV 61

Query: 446 WNPRHGLVCKPLGENTVLFQFSNLVDMKKVLNG 544
           W P HGLV + L  N   FQF +  DMKKVL+G
Sbjct: 62  WAPSHGLVIRVLKPNLFAFQFFHWRDMKKVLDG 94


>ref|XP_010687190.1| PREDICTED: uncharacterized protein LOC104901326 [Beta vulgaris
           subsp. vulgaris]
          Length = 111

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
 Frame = +2

Query: 272 DALSSIYANLSLNEDEKIQIHSDSLLMENIDG---TLNLVGRVLAPRIIGFDSISSMFKR 442
           + L+  ++ L L+++E+  +  + +L  N +G    L L+GR+L  R    ++       
Sbjct: 3   EELTQYFSKLRLDDEEETVLDLE-ILNPNTNGDKLALLLLGRILTERSYNIEAFKRTITS 61

Query: 443 IWNPRHGLVCKPLGENTVLFQFSNLVDMKKVLNG 544
           +W P HGLV + L  N   FQF +  D+KKV++G
Sbjct: 62  VWAPPHGLVIRVLSPNLYAFQFFHWKDLKKVMDG 95


>ref|XP_012468869.1| PREDICTED: uncharacterized protein LOC105786946 [Gossypium
           raimondii]
          Length = 301

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = +2

Query: 293 ANLSLNEDEK--IQIHSDSLLMENIDGTLNLVGRVLAPRIIGFDSISSMFKRIWNPRHGL 466
           A LS+NE+E+  +QI +D      + G   LVG  L   +I F ++ S    +W+P +G+
Sbjct: 6   AQLSINEEEEEILQIQTDPGNQSAV-GEFQLVGCFLTASVIHFPAMKSTMANLWHPVYGV 64

Query: 467 VCKPLGENTVLFQFSNLVDMKKVLNG 544
             + LG+   LFQF + +DM++VL G
Sbjct: 65  QIRDLGDKRYLFQFYHNLDMERVLKG 90


>ref|XP_002311007.1| hypothetical protein POPTR_0008s02040g [Populus trichocarpa]
           gi|222850827|gb|EEE88374.1| hypothetical protein
           POPTR_0008s02040g [Populus trichocarpa]
          Length = 280

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
 Frame = +2

Query: 332 HSDSLLMENIDGT-------LNLVGRVLAPRIIGFDSISSMFKRIWNPRHGLVCKPLGEN 490
           H + L++EN+D         L L GR L  R I F++  +   R+W P  G+  + L ++
Sbjct: 3   HEEELVLENVDSDTIVQSYDLCLAGRFLTDRSINFNATRNKVARLWRPGRGMCTRELSDS 62

Query: 491 TVLFQFSNLVDMKKVLNG 544
             L QF + VDMK+VL G
Sbjct: 63  KYLIQFFHSVDMKRVLEG 80


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