BLASTX nr result
ID: Rehmannia28_contig00050040
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00050040 (380 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EPR32483.1| hypothetical protein dsmv_3640 [Desulfococcus mul... 56 8e-14 emb|CAJ55201.1| NA [Lawsonia intracellularis PHE/MN1-00] 42 8e-07 gb|ADI17207.1| hypothetical protein [uncultured delta proteobact... 50 5e-06 >gb|EPR32483.1| hypothetical protein dsmv_3640 [Desulfococcus multivorans DSM 2059] Length = 152 Score = 55.8 bits (133), Expect(2) = 8e-14 Identities = 32/54 (59%), Positives = 35/54 (64%) Frame = +1 Query: 1 EFLNQGSLTRLGILTPPT*VGLQYDHQRNSVRGFSRKRGITQCPGLGPDLITSR 162 EFLNQGSL RLGIL+PPT VGL+YDH S+ F G G P LITSR Sbjct: 40 EFLNQGSLKRLGILSPPTCVGLRYDHLHISIEAFLGSLGSISLRG-KPLLITSR 92 Score = 47.8 bits (112), Expect(2) = 8e-14 Identities = 24/46 (52%), Positives = 25/46 (54%) Frame = +2 Query: 212 GLEHTTMQCDGLPFSVPAYINVTLGGAGILTCFPSLTPLGLNLGID 349 GL Q D LP VP + GG GI TC PS TP GL LGID Sbjct: 107 GLNRLFQQADDLPSCVPPSLKRYDGGTGIFTCLPSPTPFGLGLGID 152 >emb|CAJ55201.1| NA [Lawsonia intracellularis PHE/MN1-00] Length = 164 Score = 42.4 bits (98), Expect(2) = 8e-07 Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = +3 Query: 3 VP*PGFSHAPWDTHPAHLSRFTVRSPKKLRTRLF*EAWDYPVSWSRTRPH-HLSALRVVV 179 VP P FS APW +HP HLS F VR + R F +W Y ++ RT H S + +V Sbjct: 40 VPWPEFSRAPWISHPTHLSWFAVRFDTYM-LRSF--SWQYRLNSFRTYVHGFASRIHLVD 96 Query: 180 CPYRVLTTQPTGLNT 224 P R GL T Sbjct: 97 LPARQFYMLAPGLPT 111 Score = 37.4 bits (85), Expect(2) = 8e-07 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +1 Query: 292 RNINLLSIAYASRPQLRYRLTRGRIILPQ 378 RNINL I+Y RP LR RLT GR+ LP+ Sbjct: 129 RNINLFPISYGFRPYLRDRLTLGRLPLPR 157 >gb|ADI17207.1| hypothetical protein [uncultured delta proteobacterium HF0070_10I02] Length = 69 Score = 50.4 bits (119), Expect = 5e-06 Identities = 27/47 (57%), Positives = 30/47 (63%) Frame = +2 Query: 209 YGLEHTTMQCDGLPFSVPAYINVTLGGAGILTCFPSLTPLGLNLGID 349 YGL H Q D LPFSVPA ++ GG GI TCFPS +P G LG D Sbjct: 28 YGLIH---QPDHLPFSVPALLHT--GGTGIFTCFPSASPFGYTLGAD 69