BLASTX nr result

ID: Rehmannia28_contig00050040 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00050040
         (380 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPR32483.1| hypothetical protein dsmv_3640 [Desulfococcus mul...    56   8e-14
emb|CAJ55201.1| NA [Lawsonia intracellularis PHE/MN1-00]               42   8e-07
gb|ADI17207.1| hypothetical protein [uncultured delta proteobact...    50   5e-06

>gb|EPR32483.1| hypothetical protein dsmv_3640 [Desulfococcus multivorans DSM 2059]
          Length = 152

 Score = 55.8 bits (133), Expect(2) = 8e-14
 Identities = 32/54 (59%), Positives = 35/54 (64%)
 Frame = +1

Query: 1   EFLNQGSLTRLGILTPPT*VGLQYDHQRNSVRGFSRKRGITQCPGLGPDLITSR 162
           EFLNQGSL RLGIL+PPT VGL+YDH   S+  F    G     G  P LITSR
Sbjct: 40  EFLNQGSLKRLGILSPPTCVGLRYDHLHISIEAFLGSLGSISLRG-KPLLITSR 92



 Score = 47.8 bits (112), Expect(2) = 8e-14
 Identities = 24/46 (52%), Positives = 25/46 (54%)
 Frame = +2

Query: 212 GLEHTTMQCDGLPFSVPAYINVTLGGAGILTCFPSLTPLGLNLGID 349
           GL     Q D LP  VP  +    GG GI TC PS TP GL LGID
Sbjct: 107 GLNRLFQQADDLPSCVPPSLKRYDGGTGIFTCLPSPTPFGLGLGID 152


>emb|CAJ55201.1| NA [Lawsonia intracellularis PHE/MN1-00]
          Length = 164

 Score = 42.4 bits (98), Expect(2) = 8e-07
 Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   VP*PGFSHAPWDTHPAHLSRFTVRSPKKLRTRLF*EAWDYPVSWSRTRPH-HLSALRVVV 179
           VP P FS APW +HP HLS F VR    +  R F  +W Y ++  RT  H   S + +V 
Sbjct: 40  VPWPEFSRAPWISHPTHLSWFAVRFDTYM-LRSF--SWQYRLNSFRTYVHGFASRIHLVD 96

Query: 180 CPYRVLTTQPTGLNT 224
            P R       GL T
Sbjct: 97  LPARQFYMLAPGLPT 111



 Score = 37.4 bits (85), Expect(2) = 8e-07
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +1

Query: 292 RNINLLSIAYASRPQLRYRLTRGRIILPQ 378
           RNINL  I+Y  RP LR RLT GR+ LP+
Sbjct: 129 RNINLFPISYGFRPYLRDRLTLGRLPLPR 157


>gb|ADI17207.1| hypothetical protein [uncultured delta proteobacterium
           HF0070_10I02]
          Length = 69

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 27/47 (57%), Positives = 30/47 (63%)
 Frame = +2

Query: 209 YGLEHTTMQCDGLPFSVPAYINVTLGGAGILTCFPSLTPLGLNLGID 349
           YGL H   Q D LPFSVPA ++   GG GI TCFPS +P G  LG D
Sbjct: 28  YGLIH---QPDHLPFSVPALLHT--GGTGIFTCFPSASPFGYTLGAD 69


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