BLASTX nr result

ID: Rehmannia28_contig00049313 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00049313
         (342 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096823.1| PREDICTED: protein CHROMATIN REMODELING 4 [S...    47   1e-06

>ref|XP_011096823.1| PREDICTED: protein CHROMATIN REMODELING 4 [Sesamum indicum]
          Length = 2368

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -2

Query: 242  LVSTPKLPPSHFEQDNEMAVSTQPVEEKSPAFDLENKSHEKGLEAISAVTAFYSCTCPML 63
            L S PK  PSH +++NE+A+STQPV +KS   DLE+KS  K        T  +S T   L
Sbjct: 1528 LESIPK--PSHIQEENEIAISTQPVADKSSVVDLEDKSLGK--------TVPHSMTDSTL 1577

Query: 62   SIGKV 48
             +G++
Sbjct: 1578 KLGRI 1582



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 19/26 (73%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 316  KLRAG-KERLPKRNVTESYGPRQGLN 242
            KLRA  KERL KRNVTES    QGLN
Sbjct: 1501 KLRARQKERLAKRNVTESSAALQGLN 1526


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