BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00049199
         (700 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo...   258   1e-83
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   265   1e-82
gb|KYP32604.1| Retrovirus-related Pol polyprotein from transposo...   256   1e-82
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo...   255   4e-82
gb|KYP32602.1| Retrovirus-related Pol polyprotein from transposo...   255   6e-81
gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposo...   251   9e-81
ref|XP_014623268.1| PREDICTED: uncharacterized mitochondrial pro...   254   2e-80
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]        268   2e-80
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]   269   1e-79
gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposo...   247   3e-79
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   268   4e-79
gb|KYP51628.1| Retrovirus-related Pol polyprotein from transposo...   247   5e-79
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  267   5e-79
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   262   5e-79
gb|KYP32697.1| Retrovirus-related Pol polyprotein from transposo...   248   6e-79
gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposo...   251   1e-78
ref|XP_010531095.1| PREDICTED: retrovirus-related Pol polyprotei...   251   2e-78
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   266   2e-78
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   265   2e-78
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   266   2e-78

>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 269

 Score =  258 bits (660), Expect = 1e-83
 Identities = 123/227 (54%), Positives = 163/227 (71%)
 Frame = -2

Query: 696 AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
           AAMQ EY+AL+ N TW L  +P H   IGC+WVF+VK+N +GTV KYKARLVAKG+NQ  
Sbjct: 39  AAMQTEYNALLHNDTWSLVPLPPHRTAIGCKWVFRVKENPNGTVQKYKARLVAKGFNQQF 98

Query: 516 GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
           G DY +TFS V+KP T+R++L+LA+T  W I+Q+DV+NAFLNG ++ ++YM QP GFE  
Sbjct: 99  GFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMTQPPGFE-A 157

Query: 336 SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
           S + LVCKL K++YGLKQA RAW  K  + L+ L F  S+ D SL+   H ++ + I+ Y
Sbjct: 158 SDKNLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFVYSHANNVIYILVY 217

Query: 156 VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDG 16
           VDDII+TG +   L +++  L + FSLKDLG L +FLGIEV    DG
Sbjct: 218 VDDIIITGNNSTILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDG 264


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 538

 Score =  265 bits (676), Expect = 1e-82
 Identities = 125/227 (55%), Positives = 170/227 (74%)
 Frame = -2

Query: 696 AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
           AAM+ EY+AL+ N TW L ++P +   IGC+WVF++K+N+DGTV KYKARLVAKG++Q  
Sbjct: 39  AAMKQEYNALLNNGTWTLVSLPPNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQF 98

Query: 516 GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
           G DY++TFS VVKP TIR++L+LA+T  WSI+Q+DV+NAFLNG++  ++YM QP GFE  
Sbjct: 99  GSDYNETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFES- 157

Query: 336 SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
           S + LVCKL K++YGLKQA RAW  K    L  L F++S+ D SL+   H+++ + I+ Y
Sbjct: 158 SDKTLVCKLHKAIYGLKQAPRAWFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVY 217

Query: 156 VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDG 16
           VDDII+TG +   LQ++I  L++ FSLKDLG L +FLGIEV    DG
Sbjct: 218 VDDIIITGNNSSTLQNIIAQLNSAFSLKDLGRLDFFLGIEVKSNTDG 264


>gb|KYP32604.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 276

 Score =  256 bits (654), Expect = 1e-82
 Identities = 127/232 (54%), Positives = 167/232 (71%), Gaps = 1/232 (0%)
 Frame = -2

Query: 693 AMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSAG 514
           AMQ EY AL KN TW L  +P   + IGC+WVFK K NADG+  ++KARLVAKGY+Q  G
Sbjct: 45  AMQDEYLALQKNDTWNLVDLPAGCRTIGCKWVFKSKHNADGSFQRHKARLVAKGYHQREG 104

Query: 513 LDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQCS 334
            D+ +TFS VVKP T+R+VL+LA+ K W I QID++NAFL+G++   +YM QP GF   +
Sbjct: 105 FDFHETFSPVVKPTTVRVVLNLALFKQWHIHQIDINNAFLHGELTETVYMNQPPGF-NTT 163

Query: 333 SQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAYV 154
            +  VCKL K++YGLKQA R+W  K    LI +GF+ +++DTSL+ R+   S +L++ YV
Sbjct: 164 HKNKVCKLHKAIYGLKQAPRSWFQKLSTTLIHMGFRPTRSDTSLFVRNTSTSTILLLIYV 223

Query: 153 DDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQD-GLFLNQ 1
           DDII+TG+   E+ S+IL L T FSLKDLG L +FLGIEV H  D GLFL+Q
Sbjct: 224 DDIIITGSSQAEMNSLILTLHTKFSLKDLGPLHHFLGIEVSHTSDEGLFLSQ 275


>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 293

 Score =  255 bits (652), Expect = 4e-82
 Identities = 126/234 (53%), Positives = 163/234 (69%), Gaps = 1/234 (0%)
 Frame = -2

Query: 699 KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
           K AM +EYDALIKNQTW L  +P +  V+GC+WV+++K+N DGT+ KYKARLVAKG++Q 
Sbjct: 38  KTAMSLEYDALIKNQTWTLVPLPSNRTVVGCKWVYRIKENQDGTINKYKARLVAKGFHQK 97

Query: 519 AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
            G DYS+TFS V+KP TIR++L+L VT  W I+Q+D++NAFLNG ++ D+YM QP GFE 
Sbjct: 98  FGCDYSETFSPVIKPITIRVILTLDVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFE- 156

Query: 339 CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
            S + LVCKL K++YGLKQA RAW  +    L+  GF  S+ D SL        C+ ++ 
Sbjct: 157 VSDKTLVCKLNKAIYGLKQAPRAWYDRLTKTLLGFGFVQSRCDPSLLIYKQSQVCIYMLI 216

Query: 159 YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDG-LFLNQ 1
           YVDDIIVTG     +QS I  L+  F+LK LG L YFLGIEV     G + LNQ
Sbjct: 217 YVDDIIVTGNSHSLVQSFISKLNGVFALKQLGDLDYFLGIEVKRTNSGSVILNQ 270


>gb|KYP32602.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 378

 Score =  255 bits (652), Expect = 6e-81
 Identities = 127/232 (54%), Positives = 167/232 (71%), Gaps = 1/232 (0%)
 Frame = -2

Query: 693 AMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSAG 514
           AMQ EY AL KN TW L  +P   + IGC+WVFK K NADG+  ++KARLVAKGY+Q AG
Sbjct: 147 AMQDEYLALHKNGTWNLVDLPVGCRTIGCKWVFKSKHNADGSFQRHKARLVAKGYHQRAG 206

Query: 513 LDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQCS 334
            D+ +TFS VVKP  +R+VL+LA+ K W I QID++NAFL+G++   +YM QP GF   +
Sbjct: 207 FDFHETFSPVVKPTIVRVVLNLALFKQWHIHQIDINNAFLHGELTETVYMNQPTGF-NTT 265

Query: 333 SQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAYV 154
            +  VCKL K++YGLKQA R+W  K    LI +GF+ +++DTSL+ R+   S +L++ YV
Sbjct: 266 HKNKVCKLHKAIYGLKQAPRSWFQKLSTTLIHMGFRPTRSDTSLFVRNTSTSTILLLIYV 325

Query: 153 DDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQD-GLFLNQ 1
           DDII+TG+   E+ S+IL L T FSLKDLG L +FLGIEV H  D GLFL+Q
Sbjct: 326 DDIIITGSSQAEMNSLILTLHTKFSLKDLGPLHHFLGIEVSHTSDEGLFLSQ 377


>gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 282

 Score =  251 bits (642), Expect = 9e-81
 Identities = 122/233 (52%), Positives = 161/233 (69%), Gaps = 1/233 (0%)
 Frame = -2

Query: 696 AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
           A MQ EY+AL+ N TW L  +P H   IGC+WVF +K+N DGTV KYKARLV KG+NQ  
Sbjct: 39  AVMQTEYNALLSNDTWSLVHLPPHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQF 98

Query: 516 GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
           G DY++TF+ V+K  TIR++L+LA+T  W ++Q+D++NAFLNG +D ++YM QP GFE  
Sbjct: 99  GFDYNETFAPVIKLVTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFE-A 157

Query: 336 SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
           S + LVCKL K++YGLKQA RAW  K  + L+   F+ S+ D SL+   H +S + I+ Y
Sbjct: 158 SDKNLVCKLHKAIYGLKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVY 217

Query: 156 VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDG-LFLNQ 1
           VDDII+T      L +++  L + FSLKDLG L YFLGIEV    DG L L Q
Sbjct: 218 VDDIIITSNDSTLLHTLVSQLHSTFSLKDLGDLDYFLGIEVKTQSDGSLILTQ 270


>ref|XP_014623268.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 390

 Score =  254 bits (650), Expect = 2e-80
 Identities = 117/231 (50%), Positives = 166/231 (71%)
 Frame = -2

Query: 693 AMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSAG 514
           AMQ E+ AL++N TW     P +A ++GC+W+FK+K+  DG++  +KARLVA+G+ Q AG
Sbjct: 18  AMQQEFQALMRNNTWSFVPCPTNANIVGCKWIFKIKRRVDGSIEHHKARLVAQGFKQEAG 77

Query: 513 LDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQCS 334
           +DY DTFS V+KP TIR+VLS+A++ GW  RQ+D++NAFLNGD+   +YM+QP GFE  S
Sbjct: 78  IDYFDTFSPVIKPTTIRLVLSVALSHGWCRRQLDINNAFLNGDLTEIVYMQQPRGFEDKS 137

Query: 333 SQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAYV 154
           +   VC+L  ++YGLKQA RAW +K  + LI  GFK  ++DTSL+  +  +S + I+ YV
Sbjct: 138 NPSHVCRLHNAIYGLKQAPRAWFNKLKSYLIQHGFKACRSDTSLFVHYSSNSIIYILVYV 197

Query: 153 DDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
           DD+I+TGT+   +QS I  L   F+LKDLGSL YFLG+++     GL L+Q
Sbjct: 198 DDLILTGTNAAHIQSFITKLHVVFALKDLGSLHYFLGLQIHRTSTGLTLSQ 248


>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
          Length = 950

 Score =  268 bits (684), Expect = 2e-80
 Identities = 126/232 (54%), Positives = 169/232 (72%)
 Frame = -2

Query: 696 AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
           AAMQ EYDALIKN TW L        +IGC+WV+K+K+ ADGT+ +YKARLVAKG+ Q  
Sbjct: 19  AAMQAEYDALIKNNTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRY 78

Query: 516 GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
           G+DY DTFSSVVK ATIRI+LS+A+++GWS+RQ+DV N FL+G +  ++YM+QP GFE  
Sbjct: 79  GIDYEDTFSSVVKAATIRIILSIAISRGWSLRQLDVQNVFLHGFLQEEVYMQQPPGFESS 138

Query: 336 SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
           S    VCKL K+LYGLKQA+RAW S+    L+ LGF+ S+ADTSL++ +     + ++ Y
Sbjct: 139 SKPNYVCKLDKALYGLKQATRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVY 198

Query: 156 VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
           VDDIIV  + ++   +++ DL+  F+LKDLG L YFLGIEV    +G+ L Q
Sbjct: 199 VDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGIILTQ 250


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score =  269 bits (687), Expect = 1e-79
 Identities = 123/233 (52%), Positives = 171/233 (73%)
 Frame = -2

Query: 699  KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
            K AM+ EY AL+KNQTW L   P +AK+IGC+WVFK+K   +G++ +YKARLVA+G++Q+
Sbjct: 812  KVAMEQEYQALLKNQTWSLVPPPSNAKIIGCKWVFKLKHKPNGSIDRYKARLVAQGFHQT 871

Query: 519  AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
             G+D+ +TFS VVKP TIR+VLS+AV+  W I+Q+DV NAFLNGD+   ++M QP GFE 
Sbjct: 872  YGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFED 931

Query: 339  CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             S    VC+L+K+LYGLKQA RAW  K  + L+ +GF+ S+AD SL+Y H     ++++ 
Sbjct: 932  NSCPTHVCRLQKALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFHSASDIIILLI 991

Query: 159  YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
            YVDDI++TG++   +  +I  LS+HF+L+DLG +SYFLGIEV      L LNQ
Sbjct: 992  YVDDILITGSNPSRVHQIISQLSSHFALRDLGDISYFLGIEVTRRSHALHLNQ 1044


>gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 274

 Score =  247 bits (631), Expect = 3e-79
 Identities = 120/226 (53%), Positives = 160/226 (70%)
 Frame = -2

Query: 696 AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
           +AMQ EY+AL+ N TW+L ++P   K +GC+WVF+VK+NADG++ K KARLVAKG++Q  
Sbjct: 39  SAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVH 98

Query: 516 GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
           G D+ +TFS V+KP TIRI+L+LA+T  W++ Q+DV+NAFLNG ++  IYM QP GFE  
Sbjct: 99  GFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFE-A 157

Query: 336 SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
             + LVCKL K+LYGLKQA R W +K    L   GF+ S+ D SL+   H+   + I+ Y
Sbjct: 158 GDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVY 217

Query: 156 VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQD 19
           VDDII+TG+    +Q +   L + FSLK LGSL YFLGIEV H  D
Sbjct: 218 VDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPD 263


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  268 bits (684), Expect = 4e-79
 Identities = 130/233 (55%), Positives = 170/233 (72%)
 Frame = -2

Query: 699  KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
            K AM  EYDAL+KN+TW L        +IGC+WV+K+K+ ADGT+ +YKARLVAKG+ Q 
Sbjct: 951  KLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQR 1010

Query: 519  AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
             G+DY DTFS VVK ATIRI+LSLAV+KGWS+RQ+DV NAFL+G ++ ++YM QP GFE 
Sbjct: 1011 YGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFED 1070

Query: 339  CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             +    VCKL K+LYGLKQA RAW S+    L+ LGFK S+ADTSL++ +  D  + ++ 
Sbjct: 1071 PTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLV 1130

Query: 159  YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
            YVDDIIV  + ++   +++ DL   F+LKDLG L YFLGIEV   Q+G+ LNQ
Sbjct: 1131 YVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQ 1183


>gb|KYP51628.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 272

 Score =  247 bits (630), Expect = 5e-79
 Identities = 118/230 (51%), Positives = 163/230 (70%)
 Frame = -2

Query: 690 MQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSAGL 511
           MQ E DAL+ N+TW++   P + K IGC+WV+K+K+N DG++ +YKARLVAKGY+Q  G+
Sbjct: 1   MQTEIDALVLNKTWDVVEPPPNIKPIGCKWVYKIKRNPDGSIERYKARLVAKGYSQIEGV 60

Query: 510 DYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQCSS 331
           DY DTFS VVK ATIR+VL++A    W+++Q+DV NAFL+GD+  D+YM  P GF   SS
Sbjct: 61  DYFDTFSPVVKMATIRVVLAIASVHRWTLQQLDVSNAFLHGDLTEDVYMSLPPGFSGQSS 120

Query: 330 QQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAYVD 151
            Q  CKL KSLYGLK ASR W  K  ++L + G++ +QAD +L+ +    +  +++ YVD
Sbjct: 121 TQ-CCKLHKSLYGLKHASRCWYDKLSHLLFTCGYQQAQADHNLFIKASNSAITVLIIYVD 179

Query: 150 DIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
           DI++TG  D E+ ++   L THF +KDLG L YFLGIEV H + G+ L Q
Sbjct: 180 DIVLTGNSDSEITAIKHALHTHFRIKDLGILKYFLGIEVAHSEAGISLCQ 229


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  267 bits (683), Expect = 5e-79
 Identities = 127/233 (54%), Positives = 170/233 (72%)
 Frame = -2

Query: 699  KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
            KAAM+ EYDALIKN TW L        VIGC+WV+K+K+ ADGT+ +YKARLVAKG+ Q 
Sbjct: 941  KAAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQR 1000

Query: 519  AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
             G+DY DTFS VVK ATIRI+LS+AV++GWS+RQ+DV NAFL+G ++ ++YM+QP GFE 
Sbjct: 1001 YGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFES 1060

Query: 339  CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             S    VCKL K+LYGLKQA RAW S+    L+ LGF+ S+ADTSL++ +     + ++ 
Sbjct: 1061 FSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLV 1120

Query: 159  YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
            YVDDII+  + ++   +++ DL+  F+LKDLG L YFLGIEV    +G+ L Q
Sbjct: 1121 YVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQ 1173


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 839

 Score =  262 bits (669), Expect = 5e-79
 Identities = 127/233 (54%), Positives = 171/233 (73%), Gaps = 1/233 (0%)
 Frame = -2

Query: 696  AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
            AAM+ EY+AL+ N TW L  +P H   IGC+WVF++K+N DGTV K+KARLVAKG++Q  
Sbjct: 552  AAMKQEYNALMANGTWTLVPLPSHRTAIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQF 611

Query: 516  GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
            G DY++TFS VVKP TIR++L+LA+T  WSI+Q+DV+NAFLNG+++ ++YM QP GFE  
Sbjct: 612  GFDYTETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLEEEVYMSQPPGFES- 670

Query: 336  SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
            S + LVCKL K++YGLKQA RAW  K    L  L F++S+ D SL+   H ++ + I+ Y
Sbjct: 671  SDKSLVCKLHKAIYGLKQAPRAWFDKLKATLFHLNFQISKCDPSLFVYSHANNVIYILVY 730

Query: 156  VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDG-LFLNQ 1
            VDDII+TG +   L++++  L++ FSLKDLG L YFLGIEV    DG L L Q
Sbjct: 731  VDDIIITGNNTTFLRNIVSQLNSAFSLKDLGKLDYFLGIEVNSNSDGSLILTQ 783


>gb|KYP32697.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 303

 Score =  248 bits (632), Expect = 6e-79
 Identities = 123/234 (52%), Positives = 167/234 (71%), Gaps = 1/234 (0%)
 Frame = -2

Query: 699 KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
           K AMQ EY+AL+KN TW+L ++P   K I C+W+FK K   DG++ ++KARLVA+G+NQ 
Sbjct: 34  KQAMQDEYNALMKNYTWDLVSLPPGRKAITCKWIFKNKYKQDGSILRHKARLVARGFNQQ 93

Query: 519 AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
            G+DY+DTFS VV+P +IR+VL+LAV++GW I QID+DNAFLNG++  +IYM QP GF +
Sbjct: 94  QGIDYTDTFSPVVRPVSIRVVLALAVSQGWPIHQIDMDNAFLNGELQEEIYMLQPQGFHK 153

Query: 339 CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
            +S   VCKL+K++YGLKQA RAW  K    LI LGFK +++D SL+      + + I+ 
Sbjct: 154 GNS-NTVCKLRKAIYGLKQAPRAWFQKLTLTLIQLGFKQAKSDNSLFISTSRTTSIYILI 212

Query: 159 YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEV-CHGQDGLFLNQ 1
           YVDDII+T      +QS+I +L   F LKDLG L +FLGIEV   G  G+ L+Q
Sbjct: 213 YVDDIIITSNSSTTIQSLIQNLHQFFPLKDLGRLHHFLGIEVNSDGAGGIHLSQ 266


>gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 437

 Score =  251 bits (642), Expect = 1e-78
 Identities = 122/233 (52%), Positives = 161/233 (69%), Gaps = 1/233 (0%)
 Frame = -2

Query: 696 AAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQSA 517
           A MQ EY+AL+ N TW L  +P H   IGC+WVF +K+N DGTV KYKARLV KG+NQ  
Sbjct: 39  AVMQTEYNALLSNDTWSLVHLPPHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQF 98

Query: 516 GLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQC 337
           G DY++TF+ V+K  TIR++L+LA+T  W ++Q+D++NAFLNG +D ++YM QP GFE  
Sbjct: 99  GFDYNETFAPVIKLVTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFE-A 157

Query: 336 SSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAY 157
           S + LVCKL K++YGLKQA RAW  K  + L+   F+ S+ D SL+   H +S + I+ Y
Sbjct: 158 SDKNLVCKLHKAIYGLKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVY 217

Query: 156 VDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDG-LFLNQ 1
           VDDII+T      L +++  L + FSLKDLG L YFLGIEV    DG L L Q
Sbjct: 218 VDDIIITSNDSTLLHTLVSQLHSTFSLKDLGDLDYFLGIEVKTQSDGSLILTQ 270


>ref|XP_010531095.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 isoform X1 [Tarenaya hassleriana]
          Length = 435

 Score =  251 bits (640), Expect = 2e-78
 Identities = 119/233 (51%), Positives = 165/233 (70%)
 Frame = -2

Query: 699 KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
           + AM  E+DAL++N TWEL      +  +GC+WVF++K+N DGT+ ++KARLVAKG++Q 
Sbjct: 129 RQAMSEEFDALVRNGTWELVPSVTASNTVGCKWVFRIKKNPDGTIDRFKARLVAKGFHQR 188

Query: 519 AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
            G+D+ +TFS VVKP TIR+VLSLAV++ W IRQ+DV+NAFL G +  ++YM QP GF  
Sbjct: 189 PGIDFHETFSPVVKPTTIRVVLSLAVSRNWPIRQLDVNNAFLQGHLSDEVYMSQPPGFVD 248

Query: 339 CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             +   VC+L+K++YGLKQA RAW S+  N L++ GF  S AD SL+      + + ++ 
Sbjct: 249 KDNPSFVCRLRKAIYGLKQAPRAWYSELRNFLLASGFVNSVADASLFVFREARAELFVLV 308

Query: 159 YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
           YVDD+IVTG+  + +Q  I  L+  FSLKDLGSLS+FLGIE      GLFL+Q
Sbjct: 309 YVDDLIVTGSCSERIQEFISALAARFSLKDLGSLSFFLGIEASRTSKGLFLSQ 361


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  266 bits (679), Expect = 2e-78
 Identities = 129/233 (55%), Positives = 169/233 (72%)
 Frame = -2

Query: 699  KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
            K AM  EYDAL+KN+TW L        +IGC+WV+K+K+ ADGT+ +YKARLVAKG+ Q 
Sbjct: 958  KLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQR 1017

Query: 519  AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
             G+DY DTFS VVK ATIRI+LSLAV+KGWS+RQ+DV NAFL+G ++ ++YM QP GFE 
Sbjct: 1018 YGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFED 1077

Query: 339  CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             +    VCKL K+LYGLKQA RAW S+    L+ LGFK S+ DTSL++ +  D  + ++ 
Sbjct: 1078 PTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLV 1137

Query: 159  YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
            YVDDIIV  + ++   +++ DL   F+LKDLG L YFLGIEV   Q+G+ LNQ
Sbjct: 1138 YVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQ 1190


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  265 bits (678), Expect = 2e-78
 Identities = 126/233 (54%), Positives = 172/233 (73%)
 Frame = -2

Query: 699  KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
            K AM IEY AL+KN+TW L        VIGC+WV+K+K+ ADG++ +YKARLVAKGY Q 
Sbjct: 818  KDAMDIEYSALMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQ 877

Query: 519  AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
             G+DY DTFS VVK ATIRI+LS+AV++GWS+ Q+DV NAFL+G ++ ++YM+QP G+E 
Sbjct: 878  YGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYED 937

Query: 339  CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             +    VCKL K+LYGLKQA RAW S+  N L+SLGF+ S+ADTSL++ +     + ++ 
Sbjct: 938  STKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLV 997

Query: 159  YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
            YVDDIIV  +  +  ++++ DL+  F+LKDLG L+YFLGIEV   +DG+ L Q
Sbjct: 998  YVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQ 1050


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  266 bits (679), Expect = 2e-78
 Identities = 129/233 (55%), Positives = 170/233 (72%)
 Frame = -2

Query: 699  KAAMQIEYDALIKNQTWELTTVPDHAKVIGCRWVFKVKQNADGTVAKYKARLVAKGYNQS 520
            K AM  EYDAL+KN+TW L        +IGC+WV+K+K+ ADGT+ +YKARLVAKG+ Q 
Sbjct: 680  KLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQR 739

Query: 519  AGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQ 340
             G+DY DTFS VVK ATIRI+LSLAV+KGWS+RQ+DV NAFL+G ++ ++YM QP GFE 
Sbjct: 740  YGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFED 799

Query: 339  CSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMA 160
             +    VCKL K+LYGLKQA RAW S+    L+ LGFK S+ADTSL++ +  D  + ++ 
Sbjct: 800  PTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLV 859

Query: 159  YVDDIIVTGTHDQELQSVILDLSTHFSLKDLGSLSYFLGIEVCHGQDGLFLNQ 1
            YVDDIIV  + ++   +++ +L   F+LKDLG L YFLGIEV   Q+G+ LNQ
Sbjct: 860  YVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQ 912