BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00049124
         (586 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   129   2e-31
ref|XP_012491075.1| PREDICTED: uncharacterized protein LOC105803...   120   3e-28
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   119   1e-27
ref|XP_012472262.1| PREDICTED: uncharacterized protein LOC105789...   117   2e-27
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   116   6e-27
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   116   7e-27
gb|KYP45414.1| Retrovirus-related Pol polyprotein from transposo...   115   1e-26
gb|KYP59913.1| Retrovirus-related Pol polyprotein from transposo...   112   1e-26
gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposo...   115   1e-26
gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposo...   115   2e-26
gb|KYP74197.1| Retrovirus-related Pol polyprotein from transposo...   112   7e-26
ref|XP_012471034.1| PREDICTED: uncharacterized protein LOC105788...   110   1e-25
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   112   2e-25
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   112   2e-25
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   112   2e-25
ref|XP_012453935.1| PREDICTED: uncharacterized protein LOC105776...   110   3e-25
ref|XP_012458349.1| PREDICTED: uncharacterized protein LOC105779...   111   4e-25
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...   110   6e-25
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...   110   6e-25
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]   110   9e-25

>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  129 bits (325), Expect = 2e-31
 Identities = 74/183 (40%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
 Frame = +1

Query: 49  KPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLY 228
           KPL L ++L+VP ITKNLLS+S+F KDN  + EFH   C VKD+ T  VL+ G +++GLY
Sbjct: 423 KPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLY 482

Query: 229 QLDLXXXXXXXXXXXXXXXXCNSLFKN-SVIASHLPA--CNVAQNFNVNLWHNMLGHPCS 399
             D                   SL K+ SV+AS   +  C  + +   +LWH  LGHP +
Sbjct: 483 AFD---------SSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSA 533

Query: 400 ATLQNVLKQLNLSG-SVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHV 576
           AT++NVL + N++  +    +FC SC LGK H   F    T  T P ++I  D+W P  V
Sbjct: 534 ATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLV 593

Query: 577 SSN 585
            SN
Sbjct: 594 LSN 596


>ref|XP_012491075.1| PREDICTED: uncharacterized protein LOC105803429 [Gossypium
           raimondii]
          Length = 1268

 Score =  120 bits (301), Expect = 3e-28
 Identities = 66/178 (37%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
 Frame = +1

Query: 55  LFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQL 234
           L L+++L+VP + KNLLS+ QF KDN  Y EFH   C VKD +  K+LL+G + + LY+ 
Sbjct: 377 LHLQHVLHVPTVCKNLLSVGQFAKDNGVYFEFHPYLCFVKDLQIGKILLEGHMHDDLYRF 436

Query: 235 DLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQN 414
                                    S + S     N AQ     LWHN LGHPCS  L  
Sbjct: 437 QFSKSTFG--------------IDRSKLKSSSCFINSAQFSTATLWHNRLGHPCSTALTR 482

Query: 415 VLKQLNLS-GSVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSSN 585
           VLK   +     H    C +C++G  H + F    T    PF ++ SDVW PAH+ SN
Sbjct: 483 VLKSCKIPFVQSHLDQICTACQIGNAHKLPFSLSQTVYKFPFDLVVSDVWGPAHMPSN 540


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  119 bits (297), Expect = 1e-27
 Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 23/199 (11%)
 Frame = +1

Query: 55   LFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQL 234
            L L +IL VP ITKNL+SIS+ TKDN   +EF D FC VKDK  + V+LQG  ++ LY+L
Sbjct: 413  LKLNDILLVPQITKNLISISRLTKDNNIVVEFTDKFCFVKDKMKNVVILQGKAEKSLYRL 472

Query: 235  DLXXXXXXXXXXXXXXXXCN-----------------SLFKNSVIASH---LPACNVAQN 354
             L                 N                 S FKN     H   +P  N    
Sbjct: 473  LLVSSNKTFITPSGQSYSANVESTEPLTHLSMFSSVSSDFKNKTNCLHTSAVPCINSECL 532

Query: 355  FNVNLWHNMLGHPCSATLQNVLKQLNLSGSVH---SLSFCDSCKLGKQHAMHFPSVPTKT 525
             + +++H  LGHP S  L +V+K  +   +++   +   CD+CK+GK H +HF    TKT
Sbjct: 533  LSTSVFHQRLGHPSSHVLNHVIKTCSFVKTINGNRTFDSCDACKMGKMHRLHFSVTETKT 592

Query: 526  TTPFQIIQSDVWSPAHVSS 582
              P +I+ +D+W P+ V S
Sbjct: 593  KFPLEILHTDLWGPSPVIS 611


>ref|XP_012472262.1| PREDICTED: uncharacterized protein LOC105789428 [Gossypium
           raimondii]
          Length = 668

 Score =  117 bits (294), Expect = 2e-27
 Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
 Frame = +1

Query: 40  TNFKPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKE 219
           T  +PL +K+ILY P +TKNLLS+S+FT+DN    EF  S C V+D RT ++LL+G+++ 
Sbjct: 323 TKARPLHMKSILYTPDVTKNLLSVSKFTRDNQVMFEFLPSQCQVRDLRTREILLRGSVQH 382

Query: 220 GLYQLDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFN-VNLWHNMLGHPC 396
           GLY+L L                 + L K   + +    C  A++   + +WH+ LGHPC
Sbjct: 383 GLYKLHLN----------------DGLRKFQTMPT--AHCFTAKSATPLRVWHSKLGHPC 424

Query: 397 SATLQNVLKQLNLSGSVHSLSFC-DSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAH 573
              L   L+  NL+  V+   F   +C LGK+H   F    ++ + P Q++ +DVW PA 
Sbjct: 425 KNVLLKSLQHCNLAFDVNKDEFVYVACHLGKEHKQPFSPSTSQYSVPLQLVVADVWGPAL 484

Query: 574 VSSN 585
           V+SN
Sbjct: 485 VTSN 488


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  116 bits (291), Expect = 6e-27
 Identities = 73/183 (39%), Positives = 99/183 (54%), Gaps = 6/183 (3%)
 Frame = +1

Query: 55  LFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTL-KEGLYQ 231
           L L N+LYVP ITKNL+S+SQF KDN  + EFH +FCLVK +   + LL G L  +GLYQ
Sbjct: 68  LTLHNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFCLVKSQANSETLLHGVLGPDGLYQ 127

Query: 232 LDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNV--AQNFNVNLWHNMLGHPCSAT 405
                                     S++    P+ +   +Q+ +   WH+ LGHP +  
Sbjct: 128 FP------------------------SLLPPRQPSAHTVSSQSVSYATWHSRLGHPHNDV 163

Query: 406 LQNVLKQLNLSGSVHSLS-FCDSCKLGKQHAMHFPSVPTKTT--TPFQIIQSDVWSPAHV 576
           L++V K  N      S+S FC SC LGK H +  PS  +KT   TPF++I SD+W PA V
Sbjct: 164 LKSVFKLCNFPNINKSVSDFCTSCCLGKSHKL--PSQLSKTVYHTPFELIYSDLWGPAPV 221

Query: 577 SSN 585
            S+
Sbjct: 222 LSD 224


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  116 bits (291), Expect = 7e-27
 Identities = 68/181 (37%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
 Frame = +1

Query: 49  KPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLY 228
           K L LK +L+VP ITKNLLS+S+F  DN+ + EFH + C VKD  T  VL+ G LK GLY
Sbjct: 408 KTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLY 467

Query: 229 QLDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATL 408
             D                  +S F ++ + S  P    +      LWHN LGHP S  +
Sbjct: 468 VFD--------NTQLKLPLHNSSCFASTALPSKEPTVPASPTSPFTLWHNRLGHPSSHIV 519

Query: 409 QNVLKQLNLS--GSVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
             VL + NL     + SL  C  C +GK H   F    +  T P ++I +D+W PA   S
Sbjct: 520 SLVLNKCNLPHLNKIPSL-ICSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPS 578

Query: 583 N 585
           +
Sbjct: 579 S 579


>gb|KYP45414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 567

 Score =  115 bits (288), Expect = 1e-26
 Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
 Frame = +1

Query: 49  KPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLY 228
           K   LK++L+VP+ITKNLLS+S+  +DN  Y+EFH + C VK + + ++LLQG LK GLY
Sbjct: 293 KVFILKDLLHVPHITKNLLSVSKLCRDNEVYLEFHINHCFVKSQDSKEILLQGNLKNGLY 352

Query: 229 QLDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNF-----NVNLWHNMLGHP 393
             D                    L  ++  A+++P  +   N      +  +WHN L H 
Sbjct: 353 VFD----------------AVKFLKPDANSAAYVPTVSTILNVQRYEKSYVVWHNRLSHA 396

Query: 394 CSATLQNVLKQLNLSGSVHS---LSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWS 564
               ++ V+K  N+  +VH+    S C SC +GK HA+ F         P ++I SDVW 
Sbjct: 397 SRKIVEAVMKTCNIPLTVHNNKDFSVCKSCCIGKSHALPFSDSNNLYNAPLELIYSDVWG 456

Query: 565 PAHVSS 582
           P+H  S
Sbjct: 457 PSHYVS 462


>gb|KYP59913.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 326

 Score =  112 bits (280), Expect = 1e-26
 Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
 Frame = +1

Query: 49  KPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLY 228
           K   LKN+L+VP+ITKNLLS+S+F KDN  Y+E H ++CLVK + + + LL+G LK GLY
Sbjct: 74  KVFTLKNLLHVPHITKNLLSVSKFCKDNEVYVEVHTNYCLVKSQDSKETLLRGNLKNGLY 133

Query: 229 QLDLXXXXXXXXXXXXXXXXCNSLFKNSV--IASHLPACNVAQ-NFNVNLWHNMLGHPCS 399
             D                    +++++V  + ++L   NV +   + ++WHN L H   
Sbjct: 134 VFDEVQILKP------------DVYEDTVDPVPTNLTTLNVQRYRESYDVWHNRLAHASR 181

Query: 400 ATLQNVLKQLNLSGSVHSLS--FCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAH 573
             ++ V+K  N+   +++     C SC +GK H + F    T   +P +++ SDVW P+H
Sbjct: 182 KIVKVVMKTCNVPLPINNKDSIVCKSCCIGKSHTLPFSYSFTVYNSPLELVYSDVWGPSH 241

Query: 574 VSS 582
             S
Sbjct: 242 YVS 244


>gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 562

 Score =  115 bits (287), Expect = 1e-26
 Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
 Frame = +1

Query: 61  LKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQLDL 240
           L  +L+VP ITKNLLS++QF K+N  + EFH + C VK + + K+LLQG LK GLY  + 
Sbjct: 353 LNKLLHVPDITKNLLSVAQFAKENSCFFEFHSTDCFVKSQGSRKILLQGKLKNGLYAFE- 411

Query: 241 XXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQNVL 420
                            N+ F  S + S    CN     ++ +WH+ LGH  +  +++VL
Sbjct: 412 ----------NLQIVHPNNDFPVSALYSS-TTCN-----SLPIWHSRLGHCANKIVKHVL 455

Query: 421 KQLNLSGSVH-SLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
           KQ N+S  +H + + C SC LGK H   F    +  T P Q++ SD+W P+ + S
Sbjct: 456 KQCNISVPLHDNATVCGSCCLGKMHKSSFSISESVYTEPLQLVYSDIWGPSPIPS 510


>gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 660

 Score =  115 bits (287), Expect = 2e-26
 Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
 Frame = +1

Query: 61  LKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQLDL 240
           L  +L+VP ITKNLLS++QF K+N  + EFH + C VK + + K+LLQG LK GLY  + 
Sbjct: 183 LNKLLHVPDITKNLLSVAQFAKENSCFFEFHSTDCFVKSQGSRKILLQGKLKNGLYAFE- 241

Query: 241 XXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQNVL 420
                            N+ F  S + S    CN     ++ +WH+ LGH  +  +++VL
Sbjct: 242 ----------NLQIVHPNNDFPVSALYSS-TTCN-----SLPIWHSRLGHCANKIVKHVL 285

Query: 421 KQLNLSGSVH-SLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
           KQ N+S  +H + + C SC LGK H   F    +  T P Q++ SD+W P+ + S
Sbjct: 286 KQCNISVPLHDNATVCGSCCLGKMHKSSFSISESVYTEPLQLVYSDIWGPSPIPS 340


>gb|KYP74197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 455

 Score =  112 bits (280), Expect = 7e-26
 Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
 Frame = +1

Query: 61  LKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQLDL 240
           L  +L+V  ITKNLLS++QF K+   + EFH + C VK + + K+LLQG LK+GLY  + 
Sbjct: 41  LNKLLHVLDITKNLLSVAQFAKEISCFFEFHSTDCFVKSQGSQKLLLQGKLKDGLYAFE- 99

Query: 241 XXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQNVL 420
                            N+ F  S + S    CN     ++ +WH+ LGH  +  +++VL
Sbjct: 100 ----------NLQIVHPNNDFPISALYSS-TTCN-----SLPIWHSRLGHCANKIVKHVL 143

Query: 421 KQLNLSGSVH-SLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
           KQ N+S  +H + + C SC LGK H   FP   T  T P Q++ SD+W P+ + S
Sbjct: 144 KQCNISIPLHDNATMCGSCCLGKMHKSSFPISKTVYTQPLQLVYSDIWGPSPIPS 198


>ref|XP_012471034.1| PREDICTED: uncharacterized protein LOC105788615 [Gossypium
           raimondii]
          Length = 348

 Score =  110 bits (274), Expect = 1e-25
 Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
 Frame = +1

Query: 40  TNFKPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKE 219
           T  +PLF++++L VP ITKNLLS+S+F KDN    EF  + C V D RT +VLLQG+  +
Sbjct: 192 TRSRPLFMRSLLLVPGITKNLLSVSKFAKDNQVMFEFFPTQCQVHDLRTREVLLQGSEHQ 251

Query: 220 GLYQLDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCS 399
           GLY+L L                 N      V ++            +++WH+ LGHPC 
Sbjct: 252 GLYRLHL-----------------NKSTAAPVSSTSAQCFTTTMKLPLSVWHSRLGHPCQ 294

Query: 400 ATLQNVLKQLNLSGS-VHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDV 558
           A L   L + N+  + ++ +  C +C LGK+  + F    T  T P Q++ +DV
Sbjct: 295 AVLTKALARCNIQATDINKMVDCIACHLGKERKLPFVKSSTVYTAPLQLVIADV 348


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  112 bits (280), Expect = 2e-25
 Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
 Frame = +1

Query: 55  LFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQL 234
           L LKN+L+VP I  NL+S+ +   DN AY+EF+ S+  VKD++T  +LL+G L +GLY +
Sbjct: 421 LLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSV 480

Query: 235 DLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNF---------NVNLWHNMLG 387
                                    S  +SH P   V Q F         ++ LWHN LG
Sbjct: 481 P------------------------SAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLG 516

Query: 388 HPCSATLQNVLKQLNLS-GSVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVW- 561
           HP  A +  VL   NL   S+ +   CDSC+L K H + F    +K   PF ++ +D+W 
Sbjct: 517 HPSLAIVNKVLNHYNLPVFSLQNKLLCDSCQLAKSHKLPFVRNYSKAMKPFDLVHADLWG 576

Query: 562 SPAHVSSN 585
           SP+ +S N
Sbjct: 577 SPSCLSVN 584


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1279

 Score =  112 bits (280), Expect = 2e-25
 Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
 Frame = +1

Query: 61  LKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTL-KEGLYQLD 237
           L N+L+VP ITKNLLS+S+F KDN  + EFH + CLVK + T++VLLQG +  +GLY   
Sbjct: 280 LNNLLHVPLITKNLLSVSKFAKDNCVFFEFHANHCLVKSQDTNEVLLQGVVGADGLYSF- 338

Query: 238 LXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQNV 417
                              +  KNS ++S           +  +WH  LGHP S  L+ V
Sbjct: 339 --------PHLKLQVLDSFNFNKNSDVSS-----------SSTMWHTRLGHPNSHVLKLV 379

Query: 418 LKQLN-LSGSVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
           L Q N LS + H   FC SC +GK   +   +  T  + P  +I +D+W P+H++S
Sbjct: 380 LTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGPSHITS 435


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1358

 Score =  112 bits (280), Expect = 2e-25
 Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
 Frame = +1

Query: 61  LKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTL-KEGLYQLD 237
           L N+L+VP ITKNLLS+S+F KDN  + EFH + CLVK + T++VLLQG +  +GLY   
Sbjct: 359 LNNLLHVPLITKNLLSVSKFAKDNCVFFEFHANHCLVKSQDTNEVLLQGVVGADGLYSF- 417

Query: 238 LXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQNV 417
                              +  KNS ++S           +  +WH  LGHP S  L+ V
Sbjct: 418 --------PHLKLQVLDSFNFNKNSDVSS-----------SSTMWHTRLGHPNSHVLKLV 458

Query: 418 LKQLN-LSGSVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
           L Q N LS + H   FC SC +GK   +   +  T  + P  +I +D+W P+H++S
Sbjct: 459 LTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGPSHITS 514


>ref|XP_012453935.1| PREDICTED: uncharacterized protein LOC105776012 [Gossypium
           raimondii]
          Length = 475

 Score =  110 bits (276), Expect = 3e-25
 Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
 Frame = +1

Query: 40  TNFKPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKE 219
           T FK L L N+L V  I KNLLS+SQF +DN  + EFH + C++ D  T ++ L G +++
Sbjct: 241 TQFKSLRLSNVLCVLSIRKNLLSVSQFARDNDVFFEFHLTHCVLTDAVTREIFLTGRIRD 300

Query: 220 GLYQLDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCS 399
           GLYQ  +                    F +S +   +P C+V       LWHN LGHP +
Sbjct: 301 GLYQFSVPVVFNPSNVAL--------FFAHSQVPRTVPNCSV-----FALWHNRLGHPFA 347

Query: 400 ATLQNVLKQLNLSGSVHSL-SFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHV 576
           + ++ +L + N+  S +S+   C +C+ G+ H + F S  T +  PF++I S +W P  V
Sbjct: 348 SVVKTILNKCNIVSSKNSIDGICTACQKGRSHKLLF-SPSTTSYRPFKLIVSYIWGPGSV 406

Query: 577 S 579
           +
Sbjct: 407 T 407


>ref|XP_012458349.1| PREDICTED: uncharacterized protein LOC105779155 [Gossypium raimondii]
          Length = 832

 Score =  111 bits (278), Expect = 4e-25
 Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
 Frame = +1

Query: 40   TNFKPLFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKE 219
            T  K L + N+L VP I KNLLS+SQF +DN  + EFH + C++KD  T + LL G +++
Sbjct: 526  TQSKSLRMSNVLCVPSIQKNLLSVSQFARDNGVFFEFHPTHCVIKDAVTQETLLTGRIRD 585

Query: 220  GLYQLDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCS 399
            GLYQ  +                 +    +S + S +  C+V       LWHN L HP +
Sbjct: 586  GLYQFSV--------PVVSHSTNVDPFVAHSQVPSSVDDCSV-----FALWHNRLSHPSA 632

Query: 400  ATLQNVLKQLNLSGSVHSL-SFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHV 576
            + ++ +L + N+  S +     C +C+ G+ H + F S  T    PF+++ SD+W PA V
Sbjct: 633  SVVKTILNKCNIVSSKNKFDGVCTACQKGRSHKLLF-SPSTTRYQPFELVVSDLWGPASV 691

Query: 577  S 579
            +
Sbjct: 692  A 692


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score =  110 bits (276), Expect = 6e-25
 Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
 Frame = +1

Query: 55  LFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTL-KEGLYQ 231
           L L N+LYVP ITKNL+S+SQF KDN  + EFH +FCLVK + +++ LL G +  +GLYQ
Sbjct: 28  LTLHNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFCLVKSQDSNETLLLGVVGPDGLYQ 87

Query: 232 LDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVN--LWHNMLGHPCSAT 405
                                SL      ++ LP+ +   + +V+   WH+ LGH  +  
Sbjct: 88  FP-------------------SLLLPRHPSAVLPSAHTVSSNSVSYATWHSRLGHAHNDV 128

Query: 406 LQNVLKQLNLSGSVHSLS-FCDSCKLGKQHAMHFPSVPTKTT--TPFQIIQSDVWSPAHV 576
           +++V K  N      S+S FC SC LGK H +  PS  +KT   TPF++I SD+W PA V
Sbjct: 129 IKSVFKLCNFPIINKSVSDFCTSCCLGKSHKL--PSQLSKTVYHTPFELIYSDLWGPAPV 186

Query: 577 SSN 585
            S+
Sbjct: 187 LSD 189


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score =  110 bits (276), Expect = 6e-25
 Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
 Frame = +1

Query: 55  LFLKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTL-KEGLYQ 231
           L L N+LYVP ITKNL+S+SQF KDN  + EFH +FCLVK + +++ LL G +  +GLYQ
Sbjct: 49  LTLHNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFCLVKSQDSNETLLLGVVGPDGLYQ 108

Query: 232 LDLXXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVN--LWHNMLGHPCSAT 405
                                SL      ++ LP+ +   + +V+   WH+ LGH  +  
Sbjct: 109 FP-------------------SLLLPRHPSAVLPSAHTVSSNSVSYATWHSRLGHAHNDV 149

Query: 406 LQNVLKQLNLSGSVHSLS-FCDSCKLGKQHAMHFPSVPTKTT--TPFQIIQSDVWSPAHV 576
           +++V K  N      S+S FC SC LGK H +  PS  +KT   TPF++I SD+W PA V
Sbjct: 150 IKSVFKLCNFPIINKSVSDFCTSCCLGKSHKL--PSQLSKTVYHTPFELIYSDLWGPAPV 207

Query: 577 SSN 585
            S+
Sbjct: 208 LSD 210


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score =  110 bits (275), Expect = 9e-25
 Identities = 56/174 (32%), Positives = 89/174 (51%)
 Frame = +1

Query: 61  LKNILYVPYITKNLLSISQFTKDNYAYIEFHDSFCLVKDKRTHKVLLQGTLKEGLYQLDL 240
           L+ +L+VP I  NL+S+SQF  DN  + EFH  F  VKD+ T K+LLQG+L+ GLY+   
Sbjct: 86  LRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPA 145

Query: 241 XXXXXXXXXXXXXXXXCNSLFKNSVIASHLPACNVAQNFNVNLWHNMLGHPCSATLQNVL 420
                                   V +S+  + N++      LWH+ LGHP    L+++L
Sbjct: 146 RFVPSPTAF---------------VSSSYDRSSNISLTTITTLWHSRLGHPADNILKHIL 190

Query: 421 KQLNLSGSVHSLSFCDSCKLGKQHAMHFPSVPTKTTTPFQIIQSDVWSPAHVSS 582
              N+S   H  + C +C+  K H + F    ++ + PF ++ +D+W P  + S
Sbjct: 191 TSCNISHQCHKNNVCCACQFAKSHKLPFNVSVSRASHPFALLHADLWGPTSIPS 244