BLASTX nr result

ID: Rehmannia28_contig00049104 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00049104
         (306 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011102078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    55   5e-07
ref|XP_002312040.1| RNA recognition motif-containing family prot...    54   1e-06
ref|XP_011027014.1| PREDICTED: RNA-binding protein 24-like isofo...    54   1e-06
ref|XP_002315274.1| RNA recognition motif-containing family prot...    54   1e-06
emb|CBI31519.3| unnamed protein product [Vitis vinifera]               53   3e-06
ref|XP_010658454.1| PREDICTED: RNA-binding protein 38 isoform X2...    53   4e-06
ref|XP_011032750.1| PREDICTED: RNA-binding protein 24-like isofo...    53   4e-06

>ref|XP_011102078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 38-like
           [Sesamum indicum]
          Length = 271

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -1

Query: 300 AAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           +AGP+PT PALMSKPTS+APPNAVCLAVE
Sbjct: 243 SAGPIPTGPALMSKPTSIAPPNAVCLAVE 271


>ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 251

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -1

Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           P  AGPM TVP +MSKP S+APPNAVCLAVE
Sbjct: 221 PNTAGPMTTVPTIMSKPPSIAPPNAVCLAVE 251


>ref|XP_011027014.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus
           euphratica]
          Length = 253

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -1

Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           PT AGPM TVP +MSKP S+APP+AVCLAVE
Sbjct: 223 PTTAGPMTTVPTIMSKPPSIAPPSAVCLAVE 253


>ref|XP_002315274.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|118481097|gb|ABK92502.1| unknown
           [Populus trichocarpa] gi|222864314|gb|EEF01445.1| RNA
           recognition motif-containing family protein [Populus
           trichocarpa]
          Length = 253

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -1

Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           PT AGPM TVP +MSKP S+APP+AVCLAVE
Sbjct: 223 PTTAGPMTTVPTIMSKPPSIAPPSAVCLAVE 253


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -1

Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           PT  GPMPTVPA++SKPTSMA PN VCLAVE
Sbjct: 187 PTTVGPMPTVPAIISKPTSMA-PNTVCLAVE 216


>ref|XP_010658454.1| PREDICTED: RNA-binding protein 38 isoform X2 [Vitis vinifera]
          Length = 247

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -1

Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           PT  GPMPTVPA++SKPTSMA PN VCLAVE
Sbjct: 218 PTTVGPMPTVPAIISKPTSMA-PNTVCLAVE 247


>ref|XP_011032750.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus
           euphratica] gi|743779784|ref|XP_011033518.1| PREDICTED:
           RNA-binding protein 24-like isoform X2 [Populus
           euphratica]
          Length = 251

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -1

Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214
           P AAGPM TVP +MSK  S+APPNAVCLAVE
Sbjct: 221 PNAAGPMTTVPTIMSKTPSIAPPNAVCLAVE 251


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