BLASTX nr result
ID: Rehmannia28_contig00049104
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00049104 (306 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011102078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 55 5e-07 ref|XP_002312040.1| RNA recognition motif-containing family prot... 54 1e-06 ref|XP_011027014.1| PREDICTED: RNA-binding protein 24-like isofo... 54 1e-06 ref|XP_002315274.1| RNA recognition motif-containing family prot... 54 1e-06 emb|CBI31519.3| unnamed protein product [Vitis vinifera] 53 3e-06 ref|XP_010658454.1| PREDICTED: RNA-binding protein 38 isoform X2... 53 4e-06 ref|XP_011032750.1| PREDICTED: RNA-binding protein 24-like isofo... 53 4e-06 >ref|XP_011102078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 38-like [Sesamum indicum] Length = 271 Score = 55.5 bits (132), Expect = 5e-07 Identities = 25/29 (86%), Positives = 28/29 (96%) Frame = -1 Query: 300 AAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 +AGP+PT PALMSKPTS+APPNAVCLAVE Sbjct: 243 SAGPIPTGPALMSKPTSIAPPNAVCLAVE 271 >ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 251 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = -1 Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 P AGPM TVP +MSKP S+APPNAVCLAVE Sbjct: 221 PNTAGPMTTVPTIMSKPPSIAPPNAVCLAVE 251 >ref|XP_011027014.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus euphratica] Length = 253 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/31 (77%), Positives = 27/31 (87%) Frame = -1 Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 PT AGPM TVP +MSKP S+APP+AVCLAVE Sbjct: 223 PTTAGPMTTVPTIMSKPPSIAPPSAVCLAVE 253 >ref|XP_002315274.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1| unknown [Populus trichocarpa] gi|222864314|gb|EEF01445.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 253 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/31 (77%), Positives = 27/31 (87%) Frame = -1 Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 PT AGPM TVP +MSKP S+APP+AVCLAVE Sbjct: 223 PTTAGPMTTVPTIMSKPPSIAPPSAVCLAVE 253 >emb|CBI31519.3| unnamed protein product [Vitis vinifera] Length = 216 Score = 52.8 bits (125), Expect = 3e-06 Identities = 25/31 (80%), Positives = 27/31 (87%) Frame = -1 Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 PT GPMPTVPA++SKPTSMA PN VCLAVE Sbjct: 187 PTTVGPMPTVPAIISKPTSMA-PNTVCLAVE 216 >ref|XP_010658454.1| PREDICTED: RNA-binding protein 38 isoform X2 [Vitis vinifera] Length = 247 Score = 52.8 bits (125), Expect = 4e-06 Identities = 25/31 (80%), Positives = 27/31 (87%) Frame = -1 Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 PT GPMPTVPA++SKPTSMA PN VCLAVE Sbjct: 218 PTTVGPMPTVPAIISKPTSMA-PNTVCLAVE 247 >ref|XP_011032750.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus euphratica] gi|743779784|ref|XP_011033518.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus euphratica] Length = 251 Score = 52.8 bits (125), Expect = 4e-06 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = -1 Query: 306 PTAAGPMPTVPALMSKPTSMAPPNAVCLAVE 214 P AAGPM TVP +MSK S+APPNAVCLAVE Sbjct: 221 PNAAGPMTTVPTIMSKTPSIAPPNAVCLAVE 251