BLASTX nr result

ID: Rehmannia28_contig00047467 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047467
         (381 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073904.1| PREDICTED: pentatricopeptide repeat-containi...   149   1e-39
ref|XP_012843017.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-24
gb|EYU32757.1| hypothetical protein MIMGU_mgv1a000976mg [Erythra...    84   2e-16

>ref|XP_011073904.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Sesamum indicum]
          Length = 984

 Score =  149 bits (377), Expect = 1e-39
 Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
 Frame = +3

Query: 81  SKRVLKSAVFSPAPLLHSFKSFNRFFSTDNGLEGLIAHQEISDSIDTP-HNSSAQHFSAQ 257
           S RVLKSAVFSPAPLLHS KSFNRF S++N LEGLIA QEISDSID P H+ +AQ F++Q
Sbjct: 3   STRVLKSAVFSPAPLLHSLKSFNRFLSSENSLEGLIADQEISDSIDAPNHHPAAQCFTSQ 62

Query: 258 DLAFFRESFSDTKVADIEAGKCLTDAFSIINAIKNYNDGLG 380
           DLAF R+S SD KVAD E+ KCLTDAFSII+AIKN+NDGLG
Sbjct: 63  DLAFLRDSSSDAKVADFESRKCLTDAFSIISAIKNFNDGLG 103


>ref|XP_012843017.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Erythranthe guttata]
          Length = 990

 Score =  106 bits (264), Expect = 2e-24
 Identities = 65/109 (59%), Positives = 79/109 (72%), Gaps = 8/109 (7%)
 Frame = +3

Query: 78  MSKRVLKSA--VFSPAPLLHSFKSFNRFFSTDNG-LEGLIAHQEI---SDSIDTP-HNSS 236
           MSK VLKSA  VFSPAP  +SFK F RFF+TDN  L+GL + QEI   +DSID P HN  
Sbjct: 1   MSKTVLKSAAVVFSPAPFFNSFKHFTRFFTTDNYFLQGLTSDQEIITTADSIDAPPHNQ- 59

Query: 237 AQHFSAQDLAFFRESFSDT-KVADIEAGKCLTDAFSIINAIKNYNDGLG 380
              FS++DL+F  ES SD  KVAD ++ KC +DA SIINA+++YNDGLG
Sbjct: 60  ---FSSRDLSFLEESISDAAKVADFDSVKCSSDAVSIINAVRSYNDGLG 105


>gb|EYU32757.1| hypothetical protein MIMGU_mgv1a000976mg [Erythranthe guttata]
          Length = 924

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = +3

Query: 78  MSKRVLKSA--VFSPAPLLHSFKSFNRFFSTDNGLEGLIAHQEISDSIDTPHNSSAQHFS 251
           MSK VLKSA  VFSPAP  +SFK F RFF+TDN                         + 
Sbjct: 1   MSKTVLKSAAVVFSPAPFFNSFKHFTRFFTTDN-------------------------YF 35

Query: 252 AQDLAFFRESFSDT-KVADIEAGKCLTDAFSIINAIKNYNDGLG 380
            QDL+F  ES SD  KVAD ++ KC +DA SIINA+++YNDGLG
Sbjct: 36  LQDLSFLEESISDAAKVADFDSVKCSSDAVSIINAVRSYNDGLG 79


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