BLASTX nr result
ID: Rehmannia28_contig00047462
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00047462
(602 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR86717.1| zinc finger protein [Populus euphratica] 243 7e-79
gb|AMQ23375.1| cytochrome c biogenesis Fc (mitochondrion) [Oryza... 192 5e-54
emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera] 135 6e-37
gb|KOM25335.1| hypothetical protein LR48_Vigan98s000200 [Vigna a... 110 5e-30
gb|EEF42355.1| conserved hypothetical protein [Ricinus communis] 115 2e-28
ref|XP_013442840.1| cytochrome C biogenesis protein CcmFC protei... 88 7e-25
gb|EEF39436.1| conserved hypothetical protein [Ricinus communis] 99 2e-24
emb|CDY45516.1| BnaCnng12750D [Brassica napus] 68 2e-11
emb|CDY17588.1| BnaC01g27120D [Brassica napus] 68 2e-11
>gb|AAR86717.1| zinc finger protein [Populus euphratica]
Length = 218
Score = 243 bits (620), Expect = 7e-79
Identities = 135/197 (68%), Positives = 143/197 (72%), Gaps = 2/197 (1%)
Frame = -1
Query: 587 TNANGCKLRCSETPSADHTERHESAGNASWRSGVKHS*RYEKRGRDDIIYVRTAPRGVDP 408
TNANGCKLRCSETPSADHTERHESAGNASWRSGVKH RYEKRGRDDIIYVRTAPRGVDP
Sbjct: 2 TNANGCKLRCSETPSADHTERHESAGNASWRSGVKHPMRYEKRGRDDIIYVRTAPRGVDP 61
Query: 407 ASNQVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARAGVSIVE*RGRP*CCVGKANFLGF 228
AS QVFDQGTG+FPLPLAGQPGRERGGNGLPKKPA G +G V A +
Sbjct: 62 ASTQVFDQGTGKFPLPLAGQPGRERGGNGLPKKPA-PGRGQHRMKGMALTNVVSALPTSW 120
Query: 227 --GRRKADVGTRVGAQRN*ESHSI*GFPKWAGPGGLVSEPIGQXXXXXXXXXXXLPRNGM 54
G +ADVGTRVGAQ N ESHSI G +WAG GLVS+ GQ GM
Sbjct: 121 VTGGERADVGTRVGAQPNEESHSILGETEWAGTSGLVSD--GQTTTTSFIRLVLPAYPGM 178
Query: 53 GWNRKNAKG*RNRVGFF 3
WNR+NAK R R+GFF
Sbjct: 179 KWNRRNAK--RYRIGFF 193
>gb|AMQ23375.1| cytochrome c biogenesis Fc (mitochondrion) [Oryza minuta]
Length = 768
Score = 192 bits (489), Expect = 5e-54
Identities = 116/201 (57%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Frame = -3
Query: 600 ELWMN*CEWV*ASLLGNTQC*PH*ETRKRR*RQLAKWR*AFLAVRKERS**YHLRPYRSS 421
ELWMN CEWV ASLLGNTQC PH ETRKRR QLAKWR A LAVRKERS YHLRPYRSS
Sbjct: 310 ELWMNLCEWVLASLLGNTQCSPHSETRKRRLCQLAKWRLASLAVRKERSSSYHLRPYRSS 369
Query: 420 WSRSRIQPSL*S-GNGRIPTTAGRPAGP*ARWERASQKAGPGRGQHSRMKGTALMLCWQS 244
W RSRIQP+L S GNGRIPTTAGRPAGP ARWERASQKA PG GQHS M GTALMLCW
Sbjct: 370 WRRSRIQPTLFSPGNGRIPTTAGRPAGPSARWERASQKASPGPGQHS-MGGTALMLCWPG 428
Query: 243 QLLGFRAEKXXXXXXXXXXX*LREPFHLGLPKMGRPGRSGVRAXXXXXXXXXXXXX*PTP 64
+A+ PF + GR + P P
Sbjct: 429 -CGRIKADVGTRVGAQRYLDLRAIPF--WARQNGRAQAVWCPSRLVRRRLPHILYLPPIP 485
Query: 63 EWNGME*KERERLAQQGRFFC 1
EW GME KERE ++ C
Sbjct: 486 EWAGMELKEREATSKGSALCC 506
>emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]
Length = 194
Score = 135 bits (341), Expect = 6e-37
Identities = 95/196 (48%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Frame = -2
Query: 583 MRMGVSFAARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTSVPLLVE*IPH 404
MRMGVS ARKHPVLTTLRDTKAQVTPVGE + +I+ + P V+
Sbjct: 1 MRMGVSLDARKHPVLTTLRDTKAQVTPVGE---------RGRDHIINVRTAPRGVD---- 47
Query: 403 PTKSLIRERENSHYRWQASRAVSAVGTG-FPKSRPG-PGSA**NEGDGPNVVLAKPTSWV 230
AS V GTG FP G PG G A PTSWV
Sbjct: 48 ----------------PASNQVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARAGPTSWV 91
Query: 229 SGGEKRTWGLGSGRSVTKRAIPFRASQNGPARAVWCPSXXXXXXXXXXXXXLAYPGMEWD 50
+GGE++TWGLGSGRSVTKRAIPFRA QNG ARAVWCPS
Sbjct: 92 AGGEEQTWGLGSGRSVTKRAIPFRARQNGRARAVWCPSRLVRRRLPTH------------ 139
Query: 49 GIERTRKASATGSVFL 2
IERTR ASA GSVFL
Sbjct: 140 -IERTRSASAIGSVFL 154
>gb|KOM25335.1| hypothetical protein LR48_Vigan98s000200 [Vigna angularis]
Length = 372
Score = 110 bits (276), Expect(2) = 5e-30
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -1
Query: 473 RYEKRGRDDIIYVRTAPRGVDPASNQVFDQGTGEFPLPLAGQPGRERGGNGLPKKPA 303
RYEKRGRDDIIYVRTAP GVD ASNQVFDQGTGEFPLPL GQPGRERG NGLPKKPA
Sbjct: 276 RYEKRGRDDIIYVRTAPCGVDLASNQVFDQGTGEFPLPLEGQPGRERGRNGLPKKPA 332
Score = 47.8 bits (112), Expect(2) = 5e-30
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = -3
Query: 315 QKAGPGRGQHSRMKGTALML-CWQSQLLGFRAEK 217
+K PG G+H RMKGTALML CWQSQLLG R EK
Sbjct: 329 KKPAPGWGRH-RMKGTALMLLCWQSQLLGLRVEK 361
>gb|EEF42355.1| conserved hypothetical protein [Ricinus communis]
Length = 231
Score = 115 bits (287), Expect = 2e-28
Identities = 57/83 (68%), Positives = 62/83 (74%)
Frame = -1
Query: 539 DHTERHESAGNASWRSGVKHS*RYEKRGRDDIIYVRTAPRGVDPASNQVFDQGTGEFPLP 360
+HTERHESAGN SWRSGVKH RYEKRGRDDIIY+ PRGV+P+S QVFDQ TGEFPL
Sbjct: 70 NHTERHESAGNTSWRSGVKHLKRYEKRGRDDIIYICITPRGVNPSSKQVFDQRTGEFPLL 129
Query: 359 LAGQPGRERGGNGLPKKPARAGV 291
LAGQ G PK A AG+
Sbjct: 130 LAGQLAVSVVGTDFPKSQAPAGL 152
Score = 67.0 bits (162), Expect = 3e-10
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +2
Query: 317 EARSHRAHGPAGLPAVVGILPFPDQRLGWMRDLLHEERYGRR*YHHDLSFRTARNA*RHF 496
E SH AHGP LP V+G PFP QRLGWMR+LLHEER H + R+ +H
Sbjct: 31 EVHSHHAHGPTSLPTVMGTFPFPSQRLGWMRNLLHEERVNHTERHESAGNTSWRSGVKHL 90
Query: 497 ANW 505
+
Sbjct: 91 KRY 93
>ref|XP_013442840.1| cytochrome C biogenesis protein CcmFC protein [Medicago truncatula]
gi|657370804|gb|KEH16865.1| cytochrome C biogenesis
protein CcmFC protein [Medicago truncatula]
Length = 860
Score = 87.8 bits (216), Expect(2) = 7e-25
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -2
Query: 562 AARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTSVPLL 422
AARKHPVLTTLR+TKAQV PVGEVALSIPSGTKREVVMISSTSVPLL
Sbjct: 298 AARKHPVLTTLRETKAQVMPVGEVALSIPSGTKREVVMISSTSVPLL 344
Score = 53.5 bits (127), Expect(2) = 7e-25
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -3
Query: 372 IPTTAGRPAGP*ARWERASQKAGPGRGQHSRMKGTALMLCWQSQLLGFRAEK 217
+P GR G +K PG+G+H RMKG ALMLCWQSQLLG RAEK
Sbjct: 341 VPLLPGRERGG----NGLPKKPAPGQGRH-RMKGMALMLCWQSQLLGLRAEK 387
>gb|EEF39436.1| conserved hypothetical protein [Ricinus communis]
Length = 58
Score = 99.4 bits (246), Expect = 2e-24
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 574 GVSFAARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTSVPLLVE 416
GVSF+ARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISST VPLLVE
Sbjct: 6 GVSFSARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTFVPLLVE 58
>emb|CDY45516.1| BnaCnng12750D [Brassica napus]
Length = 114
Score = 67.8 bits (164), Expect = 2e-11
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 577 MGVSFAARKHPVLTTLRDTKAQVTPVGEVALSIPSG 470
MGVSFAARKHPVLTTLRDTKA+VT VGEVALSIPSG
Sbjct: 1 MGVSFAARKHPVLTTLRDTKARVTLVGEVALSIPSG 36
Score = 55.5 bits (132), Expect(2) = 2e-11
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = -3
Query: 315 QKAGPGRGQHSRMKGTALMLCWQSQLLGFRAEK 217
+K PGRGQH RMKGTALMLCWQSQLL RAEK
Sbjct: 49 KKPAPGRGQH-RMKGTALMLCWQSQLLRLRAEK 80
Score = 40.4 bits (93), Expect(2) = 2e-11
Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -1
Query: 377 GEFPLPL-AGQPGRERGGNGLPKKPA 303
GE L + +GQPG ERGGNGLPKKPA
Sbjct: 27 GEVALSIPSGQPGHERGGNGLPKKPA 52
>emb|CDY17588.1| BnaC01g27120D [Brassica napus]
Length = 128
Score = 55.5 bits (132), Expect(2) = 2e-11
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = -3
Query: 315 QKAGPGRGQHSRMKGTALMLCWQSQLLGFRAEK 217
+K PGRGQH RMKGTALMLCWQSQLL RAEK
Sbjct: 49 KKPAPGRGQH-RMKGTALMLCWQSQLLRLRAEK 80
Score = 40.4 bits (93), Expect(2) = 2e-11
Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -1
Query: 377 GEFPLPL-AGQPGRERGGNGLPKKPA 303
GE L + +GQPG ERGGNGLPKKPA
Sbjct: 27 GEVALSIPSGQPGHERGGNGLPKKPA 52
Score = 67.8 bits (164), Expect = 2e-11
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 577 MGVSFAARKHPVLTTLRDTKAQVTPVGEVALSIPSG 470
MGVSFAARKHPVLTTLRDTKA+VT VGEVALSIPSG
Sbjct: 1 MGVSFAARKHPVLTTLRDTKARVTLVGEVALSIPSG 36