BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047345
         (442 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092259.1| PREDICTED: pentatricopeptide repeat-containi...   140   3e-36
ref|XP_012843730.1| PREDICTED: pentatricopeptide repeat-containi...   108   8e-25
gb|EYU32118.1| hypothetical protein MIMGU_mgv1a019324mg, partial...    75   4e-13
ref|XP_009621687.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-11
gb|EYU38963.1| hypothetical protein MIMGU_mgv1a023355mg, partial...    67   2e-10
ref|XP_009762816.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-10
ref|XP_004231185.2| PREDICTED: pentatricopeptide repeat-containi...    66   7e-10
ref|XP_010670405.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-10
gb|KJB49478.1| hypothetical protein B456_008G121600 [Gossypium r...    65   1e-09
emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]    65   1e-09
ref|XP_010661790.1| PREDICTED: putative pentatricopeptide repeat...    65   1e-09
ref|XP_007051809.1| Basic helix-loop-helix DNA-binding superfami...    63   8e-09
ref|XP_015071511.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-08
ref|XP_015168109.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06

>ref|XP_011092259.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Sesamum indicum]
           gi|747045081|ref|XP_011092267.1| PREDICTED:
           pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Sesamum indicum]
           gi|747045083|ref|XP_011092276.1| PREDICTED:
           pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Sesamum indicum]
          Length = 639

 Score =  140 bits (353), Expect = 3e-36
 Identities = 70/94 (74%), Positives = 78/94 (82%)
 Frame = +2

Query: 161 MSNVGRSRSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWT 340
           MSNV R RSAH+LFDKVTKR  ASQTS NCK    LCRKR NLVD FEYF +ND+ KSWT
Sbjct: 1   MSNVVRCRSAHKLFDKVTKRRQASQTSPNCKANISLCRKRLNLVDPFEYFNQNDLPKSWT 60

Query: 341 SRMSSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           S++SSLVRE R QEA+ LFKAML+NE+RPNFVTV
Sbjct: 61  SKISSLVREYRPQEAMGLFKAMLVNEQRPNFVTV 94


>ref|XP_012843730.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Erythranthe guttata]
           gi|848886980|ref|XP_012843731.1| PREDICTED:
           pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Erythranthe guttata]
          Length = 637

 Score =  108 bits (270), Expect = 8e-25
 Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = +2

Query: 161 MSNVGRSR-SAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSW 337
           M+N  RS  SAH+LFDK+TKRH AS    NCK      RKR N+VD  EYF++NDI +SW
Sbjct: 1   MTNAVRSGISAHKLFDKITKRHTASP---NCKPLIASRRKRLNMVDPVEYFEQNDIPRSW 57

Query: 338 TSRMSSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           + R+SSLV ENRS+EAI LFKAML++ +RPNFVTV
Sbjct: 58  SFRISSLVSENRSEEAIGLFKAMLVSGDRPNFVTV 92


>gb|EYU32118.1| hypothetical protein MIMGU_mgv1a019324mg, partial [Erythranthe
           guttata]
          Length = 499

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 35/52 (67%), Positives = 45/52 (86%)
 Frame = +2

Query: 287 LVDTFEYFKENDIVKSWTSRMSSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           +VD  EYF++NDI +SW+ R+SSLV ENRS+EAI LFKAML++ +RPNFVTV
Sbjct: 1   MVDPVEYFEQNDIPRSWSFRISSLVSENRSEEAIGLFKAMLVSGDRPNFVTV 52


>ref|XP_009621687.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana tomentosiformis]
           gi|697135271|ref|XP_009621688.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana tomentosiformis]
           gi|697135273|ref|XP_009621689.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana tomentosiformis]
          Length = 652

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 41/95 (43%), Positives = 61/95 (64%)
 Frame = +2

Query: 158 HMSNVGRSRSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSW 337
           +M ++G +  +++LF K++KR  +S  S N + R +        VD  + F E   V+SW
Sbjct: 14  YMKSIGEN--SYKLFAKMSKRRYSSGISLNVRERSFF-------VDPIK-FAEKQNVRSW 63

Query: 338 TSRMSSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           TS++S+LVREN+S EAI  FK ML NE +PN+VTV
Sbjct: 64  TSKISNLVRENQSIEAINFFKTMLRNEHKPNYVTV 98


>gb|EYU38963.1| hypothetical protein MIMGU_mgv1a023355mg, partial [Erythranthe
           guttata]
          Length = 365

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = +2

Query: 287 LVDTFEYFKENDIVKSWTSRMSSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           +VD  EYFK  DI +SW+ R+ SLVREN S+EAI LFKAML++ ER NFV V
Sbjct: 1   MVDPVEYFKHKDIPRSWSFRIFSLVRENTSEEAIGLFKAMLVSGERRNFVNV 52


>ref|XP_009762816.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana sylvestris]
          Length = 629

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 38/87 (43%), Positives = 53/87 (60%)
 Frame = +2

Query: 182 RSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWTSRMSSLV 361
           ++A++LF K  KR+ +S+ S N +   +              F     V+SWTS++SSLV
Sbjct: 6   KNAYKLFTKFPKRNYSSRISLNMRESSFFLHPLK--------FAGKQNVRSWTSKISSLV 57

Query: 362 RENRSQEAICLFKAMLINEERPNFVTV 442
           REN+S EAI LFK ML NE +PN+VTV
Sbjct: 58  RENQSIEAIYLFKTMLRNEHKPNYVTV 84


>ref|XP_004231185.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Solanum lycopersicum]
          Length = 612

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 39/85 (45%), Positives = 57/85 (67%)
 Frame = +2

Query: 188 AHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWTSRMSSLVRE 367
           A++LF K++KR  +S+ S   +   +        VD  + F E   V++WTS++SSLVRE
Sbjct: 38  AYKLFVKMSKRSYSSRISLTFRESSFF-------VDPIK-FAEKQNVRAWTSQISSLVRE 89

Query: 368 NRSQEAICLFKAMLINEERPNFVTV 442
           N+S EAI LFKAML +E++PN+VTV
Sbjct: 90  NQSIEAINLFKAMLKDEQKPNYVTV 114


>ref|XP_010670405.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Beta vulgaris subsp. vulgaris]
           gi|870869738|gb|KMT20483.1| hypothetical protein
           BVRB_1g004700 [Beta vulgaris subsp. vulgaris]
          Length = 641

 Score = 65.5 bits (158), Expect = 9e-10
 Identities = 36/88 (40%), Positives = 52/88 (59%)
 Frame = +2

Query: 179 SRSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWTSRMSSL 358
           SR+AH LFD++T R    QT         +    + L D  E + E   V  WTS +S L
Sbjct: 11  SRNAHNLFDQITNRRIFIQTPLCSFCCSKVYHTNSFLKDPIENYGEYKEVVYWTSIISGL 70

Query: 359 VRENRSQEAICLFKAMLINEERPNFVTV 442
           V++NR ++AI  FK ML++E+RPN+VT+
Sbjct: 71  VKQNRPKDAIAKFKLMLLSEQRPNYVTL 98


>gb|KJB49478.1| hypothetical protein B456_008G121600 [Gossypium raimondii]
          Length = 629

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
 Frame = +2

Query: 176 RSRSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKEND-IVKSWTSRMS 352
           +SR+A +LF ++T+R  +S T    +    L  + ++  DT E   END ++ SWTS++S
Sbjct: 4   QSRNARKLFAEITQRIKSSPT----RISATLFHRNSSHDDTVEPNAENDHVLVSWTSKLS 59

Query: 353 SLVRENRSQEAICLFKAMLI--NEERPNFVTV 442
            LV++ + +EAICLFK ML+  + +RPN+VT+
Sbjct: 60  KLVKQGQPEEAICLFKRMLLLKSNQRPNYVTI 91


>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +2

Query: 182 RSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWTSRMSSLV 361
           R+A+++F+++T+R+   + S        +    A   +  E+  E D V SWTS++SSLV
Sbjct: 6   RNAYKVFEEITQRNVFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLV 65

Query: 362 RENRSQEAICLFKAMLINEERPNFVTV 442
           ++N+S+ A+ LFK ML+ E+RPN VTV
Sbjct: 66  KQNQSELAVGLFKMMLMTEQRPNHVTV 92


>ref|XP_010661790.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580 [Vitis vinifera]
          Length = 868

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +2

Query: 182 RSAHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWTSRMSSLV 361
           R+A+++F+++T+R+   + S        +    A   +  E+  E D V SWTS++SSLV
Sbjct: 6   RNAYKVFEEITQRNVFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLV 65

Query: 362 RENRSQEAICLFKAMLINEERPNFVTV 442
           ++N+S+ A+ LFK ML+ E+RPN VTV
Sbjct: 66  KQNQSELAVGLFKMMLMTEQRPNHVTV 92


>ref|XP_007051809.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao] gi|508704070|gb|EOX95966.1| Basic
           helix-loop-helix DNA-binding superfamily protein
           [Theobroma cacao]
          Length = 1279

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +2

Query: 176 RSRSAHQLFDKVTKRHPASQTSRNCKTREY--LCRKRANLVDTFEYFKENDIVKSWTSRM 349
           R  +  +LF ++T R   S T  +     Y  LC +  N  D  + + + D V SWTS +
Sbjct: 650 RVATRQKLFAEITHRTRNSPTRISVALSRYSTLCYRNPNHDDPVDPYADKDHVISWTSVL 709

Query: 350 SSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           S LVR+ + +EAI LFK ML++ +RPN+VT+
Sbjct: 710 SKLVRQGQPEEAIGLFKTMLMSNQRPNYVTI 740


>ref|XP_015071511.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Solanum pennellii]
           gi|969995604|ref|XP_015071595.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g30700-like [Solanum pennellii]
          Length = 577

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 36/85 (42%), Positives = 56/85 (65%)
 Frame = +2

Query: 188 AHQLFDKVTKRHPASQTSRNCKTREYLCRKRANLVDTFEYFKENDIVKSWTSRMSSLVRE 367
           A+++F K++KR  +S+ S   +   +        VD  + F E   V++WTS++SSLVRE
Sbjct: 3   AYKMFVKMSKRCYSSRISSTFRESSFF-------VDPIK-FAEKQNVRAWTSQISSLVRE 54

Query: 368 NRSQEAICLFKAMLINEERPNFVTV 442
            +S EAI LFKAML +E++PN++TV
Sbjct: 55  KQSIEAINLFKAMLKDEQKPNYITV 79


>ref|XP_015168109.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Solanum tuberosum]
          Length = 615

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = +2

Query: 272 RKRANLVDTFEYFKENDIVKSWTSRMSSLVRENRSQEAICLFKAMLINEERPNFVTV 442
           R+ +  VD  + F E   V++WTS++SSLVREN+S EAI LFK ML +E +PN VTV
Sbjct: 15  RESSFFVDPIK-FAEKQNVRAWTSQISSLVRENQSIEAINLFKTMLKDEHKPNHVTV 70