BLASTX nr result

ID: Rehmannia28_contig00047209 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047209
         (705 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01486.1| hypothetical protein Ccrd_020244 [Cynara carduncu...    65   8e-09
gb|KVH89830.1| hypothetical protein Ccrd_008176, partial [Cynara...    63   1e-08
gb|KVI11426.1| hypothetical protein Ccrd_010161 [Cynara carduncu...    63   7e-08
gb|KVI07837.1| hypothetical protein Ccrd_013809, partial [Cynara...    60   2e-07
gb|KVI03235.1| hypothetical protein Ccrd_018472 [Cynara carduncu...    59   1e-06
gb|KVI07904.1| hypothetical protein Ccrd_013731, partial [Cynara...    57   6e-06

>gb|KVI01486.1| hypothetical protein Ccrd_020244 [Cynara cardunculus var. scolymus]
          Length = 320

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
 Frame = -3

Query: 439 QQMVAKWMFEKTGAYEEELVYKVGDRSLWRREMESLRHGEYVSVDVVSVWSMILNARESL 260
           ++ +  W+    G   E +      +++  + M+SL     VS +++ VWSM+LN  E L
Sbjct: 100 ERKLQNWILRGIGGTLEPVFMTTKGKTMTCQTMQSLVSQSVVSTEIIDVWSMVLNKEERL 159

Query: 259 RSESAPTRFFATAYSTTYSIVVP-----KYRLDDKSALAIFSTSFDAEVGVETTAKLQKI 95
           RS  +P R+F     + ++I+         R D          + D E+       ++ +
Sbjct: 160 RSNESPRRYFVQTDISIHAIIRDGDLNVNQRYDRFRKNITSCMNNDKEL-----ISMRNV 214

Query: 94  ELFFFPICKSEHLFVIVFDIKRRNCHILDN 5
           +L FFP+ +    +V+VFD+KR +  ILD+
Sbjct: 215 DLVFFPVVEPSFYYVLVFDLKRPSIAILDS 244


>gb|KVH89830.1| hypothetical protein Ccrd_008176, partial [Cynara cardunculus var.
           scolymus]
          Length = 227

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
 Frame = -3

Query: 439 QQMVAKWMFEKTGAYEEELVYKVGDRSLWRREMESLRHGEYVSVDVVSVWSMILNARESL 260
           ++ +  W+    G   E +      +++ R+ +++      VS +++ VWSM+LN  E L
Sbjct: 66  ERKLQDWILRGIGGNLEPVFMTTKGKTVTRQTLQTFVSQNIVSTEIIDVWSMVLNREERL 125

Query: 259 RSESAPTRFFATAYSTTYSIVVPKYRLDDKSALAIFSTSFDAEVGVE-TTAKLQKIELFF 83
           RS  +P R+F      +   ++    L+       F  +  + +  +     ++ ++L F
Sbjct: 126 RSNESPRRYFVQT-DISMDAIIRNEGLNVNQRYDRFRKNITSCMNTDKELISMRNVDLVF 184

Query: 82  FPICKSEHLFVIVFDIKRRNCHILDN 5
           FP+ +    +V+VFD+KR +  ILD+
Sbjct: 185 FPVVEPSFYYVLVFDLKRPSIAILDS 210


>gb|KVI11426.1| hypothetical protein Ccrd_010161 [Cynara cardunculus var. scolymus]
          Length = 828

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 39/145 (26%), Positives = 69/145 (47%)
 Frame = -3

Query: 439 QQMVAKWMFEKTGAYEEELVYKVGDRSLWRREMESLRHGEYVSVDVVSVWSMILNARESL 260
           ++ +  W+    G   E +      +++ R+ M+SL     VS +++ VWSM+LN  E L
Sbjct: 545 ERKLQDWILRGIGGTLEPVFMTTKGKTVTRQTMQSLVSQSVVSTEIIDVWSMVLNREERL 604

Query: 259 RSESAPTRFFATAYSTTYSIVVPKYRLDDKSALAIFSTSFDAEVGVETTAKLQKIELFFF 80
           RS  +P R+F  A      + V   R D          + D E+       ++ ++L FF
Sbjct: 605 RSNESPRRYFMDAIIMDEDLNV-NQRYDRFRKNITSCMNNDKEL-----ISMRNVDLVFF 658

Query: 79  PICKSEHLFVIVFDIKRRNCHILDN 5
            + +    +V+VFD+K  +  ILD+
Sbjct: 659 SVVEPSFYYVLVFDLKHPSIAILDS 683


>gb|KVI07837.1| hypothetical protein Ccrd_013809, partial [Cynara cardunculus var.
           scolymus]
          Length = 269

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
 Frame = -3

Query: 439 QQMVAKWMFEKTGAYEEELVYKVGDRSLWRREMESLRHGEYVSVDVVSVWSMILNARESL 260
           ++ +  W+    G   E +      +++ R+ M+SL     V  +++ VWSM+LN  E +
Sbjct: 77  ERKLQDWILRGVGGIFEPVFMTTKGKAITRQTMQSLISQSVVGSEIIDVWSMVLNREERM 136

Query: 259 RSESAPTRFFATAYSTTYSIVVPKYRLDDKSALAIFSTSFDAEVGVE-TTAKLQKIELFF 83
           RS  +P R+F      +   ++    L+       F  +    +  +     ++ ++L F
Sbjct: 137 RSNESPRRYFVPT-DISMDAIIRDEDLNANQRYDRFRKNITCCMNNDIKLISMRNVDLVF 195

Query: 82  FPICKSEHLFVIVFDIKRRNCHILDN 5
           FPI +    +V++FD+K  +  I+D+
Sbjct: 196 FPIVEPSFYYVVLFDLKHPSIAIIDS 221


>gb|KVI03235.1| hypothetical protein Ccrd_018472 [Cynara cardunculus var. scolymus]
          Length = 362

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
 Frame = -3

Query: 418 MFEKTGAYEEELVYKVGDRSLWRREMESLRHGEYVSVDVVSVWSMILNARESLRSESAPT 239
           MF+ T    E +     +++L  + M+SL     V  +V+  W+ +LN  E LRS  +P 
Sbjct: 84  MFDVTSDESEPVFMTPNEKTLTHQTMQSLATQSVVCKEVLDGWATVLNREERLRSNESPR 143

Query: 238 RFFATAYSTTYSIVVPKYRLDDKSALAIFS------TSFDAEVGVETTAKLQKIELFFFP 77
           R+F     T    ++    LD       F       T+ D E+       ++ I+L FFP
Sbjct: 144 RYF---IPTDMDHIIRDQGLDVHQRYESFKKNVTSCTNNDKEL-----ISMRNIDLVFFP 195

Query: 76  ICKSEHLFVIVFDIKRRNCHILDN 5
           I ++   +++VF++KR +  I+D+
Sbjct: 196 IVETSFFYIVVFNLKRPSIVIIDS 219


>gb|KVI07904.1| hypothetical protein Ccrd_013731, partial [Cynara cardunculus var.
           scolymus]
          Length = 826

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = -3

Query: 391 EELVYKVGDRSLWRREMESLRHGEYVSVDVVSVWSMILNARESLRSESAPTRFFATAYST 212
           ++ V     R+L R+ M+SL     V  DV+  W  +LN  E LRS  +  R+F     +
Sbjct: 564 DKFVVTPNGRTLTRKAMQSLASQSVVCRDVLDGWLTVLNREERLRSHDSSRRYFYPTDVS 623

Query: 211 TYSIVVPKYRLDDKSALAIFSTSFDA-EVGVETTAKLQKIELFFFPICKSEHLFVIVFDI 35
              I+  +Y LD       F  +  +  +  +    +  I+L FFPI +    +++VFD+
Sbjct: 624 MNRIIRDRY-LDVHQRYESFKNNVSSYTINDKGLISMHNIDLIFFPIVEDTFYYMVVFDL 682

Query: 34  KRRNCHILDNS 2
           K  +  I+D++
Sbjct: 683 KHPSIVIIDST 693


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