BLASTX nr result

ID: Rehmannia28_contig00046939 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046939
         (357 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMS96128.1| hypothetical protein BVRB_001970 [Beta vulgaris s...    67   2e-11
gb|KMT17680.1| hypothetical protein BVRB_2g036260 [Beta vulgaris...    65   3e-11
gb|KMS99793.1| hypothetical protein BVRB_1g020850 [Beta vulgaris...    66   1e-10

>gb|KMS96128.1| hypothetical protein BVRB_001970 [Beta vulgaris subsp. vulgaris]
          Length = 179

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
 Frame = -1

Query: 336 IEKVPESGKNRLLGR-----GTKREKQPSKSGVLIPDEVLQPYKVQIVKETFGEVMKFLK 172
           + K+ +S   R LGR     G K E   +  GV+IPDE L+PYK QI+K+T GEVMK  K
Sbjct: 91  VMKIDDSDNQRQLGRCSTIKGKKSEGTSAVGGVIIPDEFLKPYKDQIIKDTVGEVMKMFK 150

Query: 171 DQIPSETLAYIASSLNEHS 115
           +++P +T A +  SL   S
Sbjct: 151 EKLPPKTFANLTRSLGNMS 169


>gb|KMT17680.1| hypothetical protein BVRB_2g036260 [Beta vulgaris subsp. vulgaris]
          Length = 126

 Score = 65.1 bits (157), Expect = 3e-11
 Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
 Frame = -1

Query: 336 IEKVPESGKNRLLGR-----GTKREKQPSKSGVLIPDEVLQPYKVQIVKETFGEVMKFLK 172
           +  +  S K R L R     G K E   +  GV+IPDE L+ YK QI+K+T GEVMK  K
Sbjct: 19  VMNIDNSDKQRQLERCSTIKGKKSEGTSAVGGVIIPDEFLKSYKDQIIKDTVGEVMKMFK 78

Query: 171 DQIPSETLAYIASSL---------NEHSFGGINYKEQCQDDTEGHDG 58
           +Q+P ET A +  SL          EH     N +E  QDD  G++G
Sbjct: 79  EQLPLETFANLTRSLGDVSSDLEITEHPSKDTNEQELQQDD--GNNG 123


>gb|KMS99793.1| hypothetical protein BVRB_1g020850 [Beta vulgaris subsp. vulgaris]
          Length = 252

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
 Frame = -1

Query: 336 IEKVPESGKNRLLGR-----GTKREKQPSKSGVLIPDEVLQPYKVQIVKETFGEVMKFLK 172
           + K+      R LGR     G K E   +  GV+IPDE ++PYK QI+K+T GEVMK  K
Sbjct: 130 VMKIDNLDNQRQLGRCSTIKGKKSEGTSAVGGVIIPDEFMKPYKDQIIKDTVGEVMKMFK 189

Query: 171 DQIPSETLAYIASSLNEHSFGGINYKEQCQDDTEGHDGANNDDDDIEGNKEKNEDED 1
           +Q+P E+ A +  SL++ S            D E  +  + D ++ E  +  NED +
Sbjct: 190 EQLPPESFANLTRSLDDVS-----------SDLEITEHPSKDTNEQELQQVCNEDNN 235


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