BLASTX nr result

ID: Rehmannia28_contig00046696 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046696
         (337 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010468460.1| PREDICTED: uncharacterized protein LOC104748...    50   7e-06

>ref|XP_010468460.1| PREDICTED: uncharacterized protein LOC104748533 [Camelina sativa]
          Length = 318

 Score = 50.1 bits (118), Expect(2) = 7e-06
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
 Frame = +3

Query: 87  IVTNPRGI*QGDPISSYLFIILFEVFSNLFHQPRLHLCFFGLKICKIAPSI--------T 242
           +VT  RG+ QG+P+SSYLFI+  EV S L  Q +       +K+C+ +PSI        T
Sbjct: 79  LVTPSRGLRQGEPLSSYLFILCTEVLSGLCVQAQNQGLLPDIKVCRASPSINHLLIVDDT 138

Query: 243 LFFCR 257
           +FFC+
Sbjct: 139 MFFCK 143



 Score = 26.6 bits (57), Expect(2) = 7e-06
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 19  IRACVCSVSFSFNISGQVYGYVT 87
           I  CV SVS+SF I+G   G VT
Sbjct: 59  ILTCVSSVSYSFLINGTPQGLVT 81


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