BLASTX nr result
ID: Rehmannia28_contig00046648
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00046648
(635 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010243.1| Pentatricopeptide repeat-containing protein ... 50 4e-11
ref|XP_012447968.1| PREDICTED: pentatricopeptide repeat-containi... 45 2e-09
ref|XP_015057317.1| PREDICTED: pentatricopeptide repeat-containi... 46 5e-09
ref|XP_015170781.1| PREDICTED: pentatricopeptide repeat-containi... 45 7e-09
ref|XP_009780195.1| PREDICTED: pentatricopeptide repeat-containi... 45 3e-08
ref|XP_010242606.1| PREDICTED: pentatricopeptide repeat-containi... 45 3e-08
ref|XP_009618316.1| PREDICTED: pentatricopeptide repeat-containi... 45 2e-07
ref|XP_011102135.1| PREDICTED: pentatricopeptide repeat-containi... 59 6e-07
gb|EYU37193.1| hypothetical protein MIMGU_mgv1a021143mg [Erythra... 56 6e-06
ref|XP_012837736.1| PREDICTED: pentatricopeptide repeat-containi... 56 7e-06
>ref|XP_007010243.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
gi|508727156|gb|EOY19053.1| Pentatricopeptide
repeat-containing protein [Theobroma cacao]
Length = 671
Score = 49.7 bits (117), Expect(2) = 4e-11
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +1
Query: 55 AFIFVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
+FI+V N VLDF+ K G L++ +T +MD HD++SWN+LI
Sbjct: 337 SFIYVGNAVLDFYSKCGLLQEALRTFEDMDGHDMVSWNSLI 377
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 233 MILEGFSP*SFDVF*SLTIYSNL*PFGDLPETVWGEQTHCCVLKPGLSSKVVAEGPPLTR 412
M+ +G+ P + L I S D+P WG+QTHCC++KP S VV +
Sbjct: 396 MLFQGYKPNLYTYSSILNICS------DVPAIEWGKQTHCCIIKPAFDSNVVVGSALIDM 449
Query: 413 FG--FVIYTAQKSFEY 454
+ V+ A+K F+Y
Sbjct: 450 YAKCGVLNAARKVFDY 465
>ref|XP_012447968.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Gossypium raimondii]
gi|823230485|ref|XP_012447969.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like [Gossypium raimondii]
gi|823230487|ref|XP_012447970.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like [Gossypium raimondii]
gi|763793388|gb|KJB60384.1| hypothetical protein
B456_009G302600 [Gossypium raimondii]
gi|763793389|gb|KJB60385.1| hypothetical protein
B456_009G302600 [Gossypium raimondii]
gi|763793390|gb|KJB60386.1| hypothetical protein
B456_009G302600 [Gossypium raimondii]
Length = 699
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 55 AFIFVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
+F+ V N+VLDF+ K G L++ ++ ++D HD +SWN+LI
Sbjct: 337 SFLVVRNSVLDFYSKCGFLQESLRSFEDIDEHDTVSWNSLI 377
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 230 NMILEGFSP*SFDVF*SLTIYSNL*PFGDLPETVWGEQTHCCVLKPGLSSKVV 388
NM+ +G+ P + L+I S D P WG+QTHCC++KP S V+
Sbjct: 395 NMLFQGYKPNLYTYSIILSISS------DFPAIEWGKQTHCCIIKPAFDSNVI 441
>ref|XP_015057317.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum pennellii]
Length = 702
Score = 46.2 bits (108), Expect(2) = 5e-09
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 MILEGFSP*SFDVF*SLTIYSNL*PF-GDLPETVWGEQTHCCVLKPGLSSKVVAE 394
M+LEGF P SL YS++ GDLP WG+QTHC VLK L S VV +
Sbjct: 397 MLLEGFEP-------SLYTYSSILSICGDLPAIEWGKQTHCRVLKSRLDSNVVVD 444
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 55 AFIFVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
+F FV N +LDF+ K E+ K EM HD++SWN LI
Sbjct: 338 SFSFVCNALLDFYSKSDLFEESLKLFQEMKEHDVVSWNTLI 378
>ref|XP_015170781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum tuberosum]
Length = 512
Score = 44.7 bits (104), Expect(2) = 7e-09
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 MILEGFSP*SFDVF*SLTIYSNL*PF-GDLPETVWGEQTHCCVLKPGLSSKVVAE 394
M+LEGF P SL YS++ GDLP WG+QTHC VLK S VV +
Sbjct: 207 MLLEGFEP-------SLYTYSSILSICGDLPAIEWGKQTHCRVLKSRFDSNVVVD 254
Score = 42.7 bits (99), Expect(2) = 7e-09
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 55 AFIFVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
+F FV N +LDF+ K EK K EM HD++SWN LI
Sbjct: 148 SFSFVCNALLDFYSKSELFEKSLKLFQEMKEHDVVSWNTLI 188
>ref|XP_009780195.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Nicotiana sylvestris]
Length = 698
Score = 45.4 bits (106), Expect(2) = 3e-08
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 MILEGFSP*SFDVF*SLTIYSNL*PF-GDLPETVWGEQTHCCVLKPGLSSKVV 388
M+LEGF SL YS++ GDLP WG+Q+HC VLKPG S VV
Sbjct: 396 MLLEGFEA-------SLYTYSSILSICGDLPAIEWGKQSHCRVLKPGFDSNVV 441
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 55 AFIFVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
+F FV N ++DF K E+ K EM HD++SWN LI
Sbjct: 337 SFSFVCNALMDFFSKSDLFEESLKLFQEMKEHDVVSWNTLI 377
>ref|XP_010242606.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Nelumbo nucifera]
Length = 697
Score = 45.1 bits (105), Expect(2) = 3e-08
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 206 KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL*PFGDLPETVWGEQTHCCVLKPGLSSKV 385
K+ + L M+LEG +P + T S L G +P WG+Q HCC++KPG + V
Sbjct: 386 KEAIELLDKMVLEGLNPSPY------TYSSILSICGTIPAIEWGKQIHCCIIKPGFDTNV 439
Query: 386 V 388
V
Sbjct: 440 V 440
Score = 40.0 bits (92), Expect(2) = 3e-08
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 64 FVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
FV N++LD + K G LE+ K E+ D++SWNA+I
Sbjct: 339 FVVNSILDLYSKCGLLEESSKVFEEIKGKDVVSWNAMI 376
>ref|XP_009618316.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Nicotiana tomentosiformis]
Length = 698
Score = 45.4 bits (106), Expect(2) = 2e-07
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 MILEGFSP*SFDVF*SLTIYSNL*PF-GDLPETVWGEQTHCCVLKPGLSSKVV 388
M+LEGF SL YS++ GDLP WG+Q+HC VLKPG S VV
Sbjct: 396 MLLEGFEA-------SLYTYSSILSICGDLPAIEWGKQSHCRVLKPGFDSNVV 441
Score = 37.4 bits (85), Expect(2) = 2e-07
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 55 AFIFVSNTVLDFHGKIGHLEKPDKTSHEMDLHDIISWNALI 177
+F FV N ++D + K ++ K EM HD++SWN LI
Sbjct: 337 SFSFVCNALMDLYSKSDLFDESLKLFQEMKEHDVVSWNTLI 377
>ref|XP_011102135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Sesamum indicum]
Length = 588
Score = 59.3 bits (142), Expect = 6e-07
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 2 EIQGGMRFHCLIMKIRFELLYLFQIQYWIFTEKLATLRSPTRL--------LMRWICMIL 157
EIQGG + HC I+K+ FE F K+ L ++ ++ W +I
Sbjct: 259 EIQGGAQLHCSIIKMGFESFTFVCNAALDFYAKIDCLDESFKIFCGMDVNDIVSWNALI- 317
Query: 158 LAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL*PFGDLPETVWG 337
AG + G+ + + +M+L+GF P D++ T L GDLP T WG
Sbjct: 318 -AGYV---NSGHY---EAAIGFIRSMLLQGFHP---DIY---TYSILLSVCGDLPATEWG 364
Query: 338 EQTHCCVLKPGLSSKVV 388
+QTHCC++KPGL S VV
Sbjct: 365 KQTHCCIIKPGLDSNVV 381
>gb|EYU37193.1| hypothetical protein MIMGU_mgv1a021143mg [Erythranthe guttata]
Length = 605
Score = 56.2 bits (134), Expect = 6e-06
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Frame = +2
Query: 2 EIQGGMRFHCLIMKIRFELLYLFQIQYWIFTEKLATLRSPTRL--------LMRWICMIL 157
E + G++ HCLI+K+ F+ L F K+ L + ++ W L
Sbjct: 276 ETRHGIQIHCLIIKLGFQSFTLVSNATSDFYAKIGCLDESFKTFCEMEVHDIVSW--NTL 333
Query: 158 LAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL*PFGDLPETVWG 337
+AG L + + + NM+L+GF P + T S L GDLP WG
Sbjct: 334 IAGFLNYGRY------ELAIKFIENMLLDGFDPNIY------TYSSILSVCGDLPAAEWG 381
Query: 338 EQTHCCVLKPGLSSKVV 388
+QTHC V+KPGL S VV
Sbjct: 382 KQTHCRVIKPGLDSNVV 398
>ref|XP_012837736.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Erythranthe guttata]
Length = 648
Score = 56.2 bits (134), Expect = 7e-06
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Frame = +2
Query: 2 EIQGGMRFHCLIMKIRFELLYLFQIQYWIFTEKLATLRSPTRL--------LMRWICMIL 157
E + G++ HCLI+K+ F+ L F K+ L + ++ W L
Sbjct: 319 ETRHGIQIHCLIIKLGFQSFTLVSNATSDFYAKIGCLDESFKTFCEMEVHDIVSW--NTL 376
Query: 158 LAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL*PFGDLPETVWG 337
+AG L + + + NM+L+GF P + T S L GDLP WG
Sbjct: 377 IAGFLNYGRY------ELAIKFIENMLLDGFDPNIY------TYSSILSVCGDLPAAEWG 424
Query: 338 EQTHCCVLKPGLSSKVV 388
+QTHC V+KPGL S VV
Sbjct: 425 KQTHCRVIKPGLDSNVV 441