BLASTX nr result

ID: Rehmannia28_contig00046581 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046581
         (390 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EID19495.1| hypothetical protein HMPREF1043_0707 [Streptococc...    51   3e-10
gb|EFE68559.1| LOW QUALITY PROTEIN: conserved hypothetical prote...    57   3e-08
gb|EFE80053.1| LOW QUALITY PROTEIN: conserved hypothetical prote...    57   5e-08
gb|ADI18015.1| hypothetical protein [uncultured delta proteobact...    50   9e-06

>gb|EID19495.1| hypothetical protein HMPREF1043_0707 [Streptococcus anginosus
           subsp. whileyi CCUG 39159]
          Length = 191

 Score = 50.8 bits (120), Expect(2) = 3e-10
 Identities = 29/62 (46%), Positives = 33/62 (53%)
 Frame = +2

Query: 2   DRLGILYLTT*VGLGYGRLEPR*KIFLAA*DHPASRIRGHYQVSGYVSCGFAYSSPYTLG 181
           DRL ILYLTT VGLGYG+ EP    FL +   P     G      + + GF Y  PYTL 
Sbjct: 48  DRLSILYLTTCVGLGYGQFEPHADAFLGSIGSPDHPPCGRPSGLRHTAGGFTYRQPYTLR 107

Query: 182 RG 187
            G
Sbjct: 108 PG 109



 Score = 40.4 bits (93), Expect(2) = 3e-10
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 243 PDRVTRSTTNLHPKVSARGFRRLASKGSSWAVLRRFRNINRMSIDYACR 389
           P +V RS +    K      R ++  GS+W VL  + NIN +SIDYACR
Sbjct: 130 PVQVPRSPSPTPSKTRFGMVRAVSITGSTWTVLHWYGNINPLSIDYACR 178


>gb|EFE68559.1| LOW QUALITY PROTEIN: conserved hypothetical protein, partial
           [Streptomyces ghanaensis ATCC 14672]
          Length = 91

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 36/84 (42%), Positives = 41/84 (48%)
 Frame = +2

Query: 35  VGLGYGRLEPR*KIFLAA*DHPASRIRGHYQVSGYVSCGFAYSSPYTLGRGLPSPRGGYL 214
           VG GYG      + FL +     S     ++VS  V  GFAY + YTL  G P P    L
Sbjct: 1   VGFGYGPPCNSLEAFLDSIGSSTSPQSARHRVSDDVPGGFAYLTSYTLTPGQPPPGLDCL 60

Query: 215 PASLHRLTTTRSGHALHH*PPPEG 286
           PAS H   T R G  LHH P PEG
Sbjct: 61  PASPHHSPTNRLGRRLHHSPSPEG 84


>gb|EFE80053.1| LOW QUALITY PROTEIN: conserved hypothetical protein, partial
           [Streptomyces albus J1074]
          Length = 104

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = +2

Query: 149 GFAYSSPYTLGRGLPSPRGGYLPASLHRLTTTRSGHALHH*PPPEGVST 295
           GF Y + YTL  G P P   YLPAS H   TT SGH LHH P PEG  T
Sbjct: 52  GFTYRTAYTLTPGQPPPGMDYLPASPHHSPTTSSGHRLHHFPFPEGSGT 100


>gb|ADI18015.1| hypothetical protein [uncultured delta proteobacterium
           HF0200_19J16]
          Length = 66

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = -2

Query: 194 MVVHVQGCRASCRQIRSSHSL-RPDSDRVC-GKQGDPMLPRKSSSEVRAARTPNRLRWLG 21
           M + VQG R   +     HS  R D +R+C  K+  P    K  S  RA RTPNR RW+G
Sbjct: 1   MDIPVQGIRRKFQANPGLHSTPRADDERLCFAKRSIPHCQEKLLSIARANRTPNRHRWVG 60

Query: 20  REYQG 6
           REYQG
Sbjct: 61  REYQG 65


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