BLASTX nr result

ID: Rehmannia28_contig00046522 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046522
         (817 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009109961.1| PREDICTED: uncharacterized protein LOC103835...    49   1e-06
ref|XP_012080090.1| PREDICTED: uncharacterized protein LOC105640...    42   8e-06

>ref|XP_009109961.1| PREDICTED: uncharacterized protein LOC103835530 [Brassica rapa]
          Length = 427

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
 Frame = -3

Query: 440 IWQAANQKIFEDXXXXXXXXXXSACLSLSTFRQAHLWPERPLEDL*ASPLRSDAP---AG 270
           IW   NQ IFE+           A      +++A L  +     +     RS+A    AG
Sbjct: 232 IWTTRNQLIFENRVFSPLETLTKAICLAREWQEAQLHGKVQDSTIPVLNRRSNATNTFAG 291

Query: 269 THVFFDGVISSSGNCAGIGVCLLNNEGQFIQGFAKCFPSISNPDVAKALALREAISLARN 90
             V+ D       N AG+G    ++ G  I   +K    +S+P +A+ LA+REA+  AR 
Sbjct: 292 VSVYTDASWKEGSNNAGLGWIFTDHLGSIIIKESKLEEFVSSPLMAEGLAIREALLQARR 351

Query: 89  SQCAQLSFLSDSSNIILAASRISDAHP 9
              + L+  SD+  ++ A   I+D  P
Sbjct: 352 QGYSTLTVFSDAQTLVRA---INDRKP 375



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -1

Query: 676 LPCPVNLVGRHMPHCEVCSLCNANDISSAHLFFHFYVSSQVWYMAGLLEL 527
           LP   NL  R +     C  C   + ++AHLF H   +++VW MA LL +
Sbjct: 144 LPLGENLEKRSILSVSKCIHCGQQE-TAAHLFLHCSFATKVWEMAPLLHV 192


>ref|XP_012080090.1| PREDICTED: uncharacterized protein LOC105640399 [Jatropha curcas]
          Length = 340

 Score = 41.6 bits (96), Expect(2) = 8e-06
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
 Frame = -3

Query: 338 HLWPERPLEDL*A-SPLRSDAPAGTHVF------FDGVISSSGNCAGIGVCLLNNEGQFI 180
           H W E  L DL A SP+ S+       F       D     +    GIG  + N+  +FI
Sbjct: 161 HAWKEAKLHDLGAPSPVFSNHTWSPPPFNWLKVNTDASTGVASGYVGIGTVVRNSASEFI 220

Query: 179 QGFAKCFPSISNPDVAKALALREAISLARNSQCAQLSFLSDSSNI 45
              A  FP   N  VA+A+A+REA+S  ++     +   +DS ++
Sbjct: 221 ASKAWRFPGYFNAKVAEAIAVREALSWIKDHGWNYILLETDSQSV 265



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = -1

Query: 676 LPCPVNLVGRHMPHCEVCSLCNANDISSAHLFFHFYVSSQVWYMAGL-------LELANQ 518
           LPC  NL  R +   ++C LC  +  ++ H+  +   S QVW ++ +       L     
Sbjct: 51  LPCRRNLCSRKVDIQDICPLCLGHSETNLHVLINCPFSRQVWTLSHIGFRWSSALSFGEW 110

Query: 517 FAQASGELWCRDIFSHTLLIC 455
           F QAS  L   ++ S+  ++C
Sbjct: 111 FQQASTSLTLENL-SYVSMVC 130


Top