BLASTX nr result

ID: Rehmannia28_contig00045742 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00045742
         (615 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBJ23364.1| hypothetical protein (mitochondrion) [Beta vulga...    59   9e-08
gb|AGC78848.1| hypothetical protein (mitochondrion) [Vicia faba]       59   2e-07

>emb|CBJ23364.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 169

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 34/115 (29%), Positives = 64/115 (55%)
 Frame = +1

Query: 19  AGGLNQPPAPSGDSVFFPISQSDEGEEQPAGTSEIEKAKAKRESLNRFPKPHPPNIAFEN 198
           +GG + PP P  D  F PI++  E ++ P      E + +KR+           +  F N
Sbjct: 60  SGGSSTPPGPFEDPSFIPINE--ENQQLP------ETSNSKRDYRQELLTDKSLSRQFRN 111

Query: 199 ALIRQDHIMEKMANILKDQGIHLEDPLDIKRGVDLFLHDIMQMESRTRSTQLRKI 363
           AL++Q+ I + MA +L ++   +ED   I+ GVD++L + M++E ++R+ +L ++
Sbjct: 112 ALVKQEEISQVMAELLNNRDSTMED---IRAGVDIYLTETMELEGKSRNKKLHRL 163


>gb|AGC78848.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 245

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
 Frame = +1

Query: 19  AGGLNQPPAPSGDSVFFPISQSDEGEEQPAGTSE-IEKAKAKRESLNRFPKPHPPNIAFE 195
           +GG NQPP+P G    F  +Q   G     G    +    ++  ++    +    ++++ 
Sbjct: 103 SGGFNQPPSPEGALPAFHETQDQPGPSASEGEGRAVRDFSSELRNIESLREDKSLDVSYR 162

Query: 196 NALIRQDHIMEKMANILKDQGIHLEDPLDIKRGVDLFLHDIMQMESRTRSTQLRKILTSL 375
           NALI+Q+ I+ +M   L   G  + D  DI+RGVD +L   M +    R  +L  I   L
Sbjct: 163 NALIKQESIVIEMKKFLLP-GNPITDE-DIQRGVDSYLTATMGLSVNYRRKKLSDIHRDL 220

Query: 376 SDHGAQSPFYAELLAQINSFRG 441
           +D G+ S +   ++ +I S  G
Sbjct: 221 TDRGSASTYLNAIIKEIESMNG 242


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