BLASTX nr result
ID: Rehmannia28_contig00045667
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00045667
(309 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EJZ85023.1| hypothetical protein HMPREF9241_01603 [Actinomyce... 100 6e-26
gb|EFE70734.1| LOW QUALITY PROTEIN: retrotransposon protein, par... 91 3e-22
gb|EFE80055.1| retrotransposon protein [Streptomyces albus J1074... 91 3e-22
gb|EFE67886.1| retrotransposon protein [Streptomyces ghanaensis ... 82 5e-19
gb|EDX22401.1| retrotransposon protein [Streptomyces sp. Mg1] 81 2e-18
gb|ACJ83969.1| unknown [Medicago truncatula] 81 6e-18
gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group] 77 2e-16
gb|EFE68557.1| predicted protein [Streptomyces ghanaensis ATCC 1... 69 2e-13
gb|EZY42791.1| hypothetical protein V052_02628, partial [Staphyl... 69 2e-13
ref|WP_003957150.1| MULTISPECIES: hypothetical protein [Streptom... 67 4e-13
gb|EDX25830.1| hypothetical protein SSAG_05517 [Streptomyces sp.... 67 4e-13
gb|EDY45008.1| hypothetical protein SSBG_02845 [Streptomyces sp.... 67 5e-13
gb|AIG89822.1| hypothetical protein (mitochondrion) [Capsicum an... 68 9e-13
gb|ACO03284.1| conserved hypothetical protein [Persephonella mar... 51 1e-12
gb|ADI18134.1| hypothetical protein [uncultured Verrucomicrobial... 66 2e-12
gb|ACO03644.1| conserved hypothetical protein [Persephonella mar... 49 3e-12
ref|WP_026390740.1| hypothetical protein [Acholeplasma axanthum] 63 4e-11
gb|EUT77524.1| hypothetical protein O310_02010, partial [Staphyl... 62 5e-11
gb|ADI17935.1| hypothetical protein [uncultured Desulfobacterale... 54 1e-10
gb|KAE34487.1| hypothetical protein W610_02615, partial [Staphyl... 61 2e-10
>gb|EJZ85023.1| hypothetical protein HMPREF9241_01603 [Actinomyces turicensis
ACS-279-V-Col4] gi|404390283|gb|EJZ85352.1| hypothetical
protein HMPREF9241_01352 [Actinomyces turicensis
ACS-279-V-Col4] gi|404393425|gb|EJZ88479.1| hypothetical
protein HMPREF9241_00001 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 92
Score = 100 bits (250), Expect = 6e-26
Identities = 54/76 (71%), Positives = 62/76 (81%)
Frame = +3
Query: 3 WIGVKGQSNTVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTEISQTPNAGKCSVAVRR 182
W+GVKGQSN+VIAGSPRNAFRCSV L+EVE A +T++SQTPNA + S+AVR
Sbjct: 17 WVGVKGQSNSVIAGSPRNAFRCSVVCCLVEVELLDGRWALWVTDVSQTPNAIRLSMAVRL 76
Query: 183 RGISFVVERETAQIIS 230
RGISFVVERETAQIIS
Sbjct: 77 RGISFVVERETAQIIS 92
>gb|EFE70734.1| LOW QUALITY PROTEIN: retrotransposon protein, partial [Streptomyces
ghanaensis ATCC 14672]
Length = 53
Score = 90.5 bits (223), Expect = 3e-22
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 3 WIGVKGQSNTVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTEISQTPNAGK 161
W+GVKGQSN+VIAGSPRNAFRCSV FL EVEHW+ G YR+T++SQTPNAGK
Sbjct: 1 WLGVKGQSNSVIAGSPRNAFRCSVVCFLPEVEHWIGDGPYRVTDLSQTPNAGK 53
>gb|EFE80055.1| retrotransposon protein [Streptomyces albus J1074]
gi|291355074|gb|EFE81976.1| retrotransposon protein
[Streptomyces albus J1074] gi|292831587|gb|EFF89936.1|
hypothetical protein SSTG_00254 [Streptomyces sp. e14]
gi|297148195|gb|EFH28879.1| retrotransposon protein
[Streptomyces sviceus ATCC 29083]
Length = 54
Score = 90.5 bits (223), Expect = 3e-22
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 3 WIGVKGQSNTVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTEISQTPNAGK 161
W+GVKGQSN+VIAGSPRNAFRCSV FL EVEHW+ G YR+T++SQTPNAGK
Sbjct: 2 WLGVKGQSNSVIAGSPRNAFRCSVVCFLPEVEHWIGDGPYRVTDLSQTPNAGK 54
>gb|EFE67886.1| retrotransposon protein [Streptomyces ghanaensis ATCC 14672]
Length = 50
Score = 82.0 bits (201), Expect = 5e-19
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +3
Query: 12 VKGQSNTVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTEISQTPNAGK 161
+KGQSN+VIAGSPRNAFRCSV FL EVEHW+ G YR+T++SQTPNAGK
Sbjct: 1 MKGQSNSVIAGSPRNAFRCSVVCFLPEVEHWIGDGPYRVTDLSQTPNAGK 50
>gb|EDX22401.1| retrotransposon protein [Streptomyces sp. Mg1]
Length = 56
Score = 80.9 bits (198), Expect = 2e-18
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 3 WIGVKGQSNTVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTEISQTPNAGK 161
W +GQSN+VIAGSPRNAFRCSV FL EVEHW+ G YR+T++SQTPNAGK
Sbjct: 4 WGWGEGQSNSVIAGSPRNAFRCSVVCFLPEVEHWIGDGPYRVTDLSQTPNAGK 56
>gb|ACJ83969.1| unknown [Medicago truncatula]
Length = 102
Score = 80.9 bits (198), Expect = 6e-18
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Frame = +2
Query: 20 PIKHRDSWFSPKCI*VQRCVVLVGGRALDGLGGLSAYRNQPNSEC---WQV*RGSETAGD 190
P++ R SWFSPKC+ Q+ +G + G G S +++ W+V SE GD
Sbjct: 2 PLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYPWRVKSASEAMGD 61
Query: 191 KLRRREGNSPDHQLRPLSVC*VGKDVELRRQPGGWLGSS 307
KL RREGNSPDHQLRPL+ V K+V ++RQPGG SS
Sbjct: 62 KLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSS 100
>gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group]
Length = 109
Score = 77.0 bits (188), Expect = 2e-16
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Frame = +2
Query: 20 PIKHRDSWFSPKCI*VQRCVVLVGGRALDGLGGLSAYRNQP------NSECWQV*RGSET 181
P++ R SWFSPKC+ Q+ +G + G G S +++ + + V SET
Sbjct: 2 PLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVRSASET 61
Query: 182 AGDKLRRREGNSPDHQLRPLSVC*VGKDVELRRQPGGWLGSS 307
GDKL RREGNSPDHQLRPL+ V K+V ++RQPGG SS
Sbjct: 62 MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSS 103
>gb|EFE68557.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length = 67
Score = 68.6 bits (166), Expect = 2e-13
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -2
Query: 164 TLASIRSLADFGKPISPLDHPVLYLQQEPRNAAPKCISGRTSYHGV 27
+LA IRSLA P+ P+ +PVLYL+QE +AAPKCISGRTSYHGV
Sbjct: 22 SLAGIRSLAKVSNPVGPIAYPVLYLRQETHDAAPKCISGRTSYHGV 67
>gb|EZY42791.1| hypothetical protein V052_02628, partial [Staphylococcus aureus
MSSA-93] gi|613236462|gb|EZY42792.1| hypothetical
protein V052_02627, partial [Staphylococcus aureus
MSSA-93]
Length = 74
Score = 68.6 bits (166), Expect = 2e-13
Identities = 32/58 (55%), Positives = 38/58 (65%)
Frame = -2
Query: 296 ANLLVVYATPHPFPLSTRLGALADDLGCFPLDDEAYPPPSHCHATLASIRSLADFGKP 123
AN+LVV+ATPHPFPL+ G LA LGCFP + Y P S L IRSL++FG P
Sbjct: 1 ANILVVWATPHPFPLNIYFGTLAGGLGCFPFEHGPYHPCSDSQVKLIGIRSLSEFGNP 58
>ref|WP_003957150.1| MULTISPECIES: hypothetical protein [Streptomyces]
gi|197705719|gb|EDY51531.1| hypothetical protein
SSCG_04411 [Streptomyces clavuligerus ATCC 27064]
gi|289698920|gb|EFD66349.1| conserved hypothetical
protein [Streptomyces lividans TK24]
gi|289701155|gb|EFD68584.1| conserved hypothetical
protein [Streptomyces lividans TK24]
gi|289701448|gb|EFD68877.1| conserved hypothetical
protein [Streptomyces lividans TK24]
gi|292833482|gb|EFF91831.1| hypothetical protein
SSTG_02150 [Streptomyces sp. e14]
gi|292835113|gb|EFF93462.1| hypothetical protein
SSTG_03781 [Streptomyces sp. e14]
gi|780960477|dbj|GAO13069.1| hypothetical protein
TPA0598_20_00020 [Streptomyces sp. NBRC 110027]
gi|913348736|dbj|GAP48813.1| predicted protein
[Streptomyces azureus]
Length = 67
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = -2
Query: 164 TLASIRSLADFGKPISPLDHPVLYLQQEPRNAAPKCISGRTSYHGV 27
+L IRSLA P+ P+ +PVLYL+QE +AAPKCISGRTSYHGV
Sbjct: 22 SLTGIRSLAKVSNPVGPIAYPVLYLRQETHDAAPKCISGRTSYHGV 67
Score = 34.3 bits (77), Expect(2) = 4e-13
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 226 MIWAVSLSTTKLIPRRLTATLHL 158
M+WAVSLST +LIP LTA L L
Sbjct: 1 MLWAVSLSTMELIPHSLTAALSL 23
>gb|EDX25830.1| hypothetical protein SSAG_05517 [Streptomyces sp. Mg1]
gi|302444024|gb|EFL15840.1| conserved hypothetical
protein [Streptomyces sp. C] gi|302444666|gb|EFL16482.1|
conserved hypothetical protein [Streptomyces sp. C]
Length = 67
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = -2
Query: 164 TLASIRSLADFGKPISPLDHPVLYLQQEPRNAAPKCISGRTSYHGV 27
+L IRSLA P+ P+ +PVLYL+QE +AAPKCISGRTSYHGV
Sbjct: 22 SLTGIRSLAKVSNPVGPIAYPVLYLRQETHDAAPKCISGRTSYHGV 67
Score = 34.3 bits (77), Expect(2) = 4e-13
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 226 MIWAVSLSTTKLIPRRLTATLHL 158
M+WAVSLST +LIP LTA L L
Sbjct: 1 MLWAVSLSTMELIPHSLTAVLSL 23
>gb|EDY45008.1| hypothetical protein SSBG_02845 [Streptomyces sp. SPB074]
gi|302426771|gb|EFK98586.1| conserved hypothetical
protein [Streptomyces sp. SPB78]
gi|302427152|gb|EFK98967.1| conserved hypothetical
protein [Streptomyces sp. SPB78]
gi|302430313|gb|EFL02129.1| conserved hypothetical
protein [Streptomyces sp. SPB78]
Length = 67
Score = 66.6 bits (161), Expect(2) = 5e-13
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = -2
Query: 164 TLASIRSLADFGKPISPLDHPVLYLQQEPRNAAPKCISGRTSYHGV 27
+L IRSLA P+ P+ +PVLYL+QE +AAPKCISGRTSYHGV
Sbjct: 22 SLTGIRSLAKVSNPVRPIAYPVLYLRQETHDAAPKCISGRTSYHGV 67
Score = 34.3 bits (77), Expect(2) = 5e-13
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 226 MIWAVSLSTTKLIPRRLTATLHL 158
M+WAVSLST +LIP LTA L L
Sbjct: 1 MLWAVSLSTMELIPHSLTAVLSL 23
>gb|AIG89822.1| hypothetical protein (mitochondrion) [Capsicum annuum]
Length = 107
Score = 67.8 bits (164), Expect = 9e-13
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Frame = +2
Query: 20 PIKHRDSWFSPKCI*VQRCVVLVGGRALDGLGGLSAYRNQPNSECWQV*R--------GS 175
P++ R SWFSPKC+ Q+ +G + G G S +++ + S
Sbjct: 2 PLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYGLKIKKEGSKSAS 61
Query: 176 ETAGDKLRRREGNSPDHQLRPLSVC*VGKDVELRRQPGGWLGSS 307
ET GDKL RRE SPDHQLRPL+ V K+V ++RQPGG SS
Sbjct: 62 ETMGDKLHRREETSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSS 105
>gb|ACO03284.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 159
Score = 50.8 bits (120), Expect(2) = 1e-12
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1
Query: 105 SSALPPTRTTQRCT*MHFGENQLSRCLIGLSPLST 1
S +LPP R +RCT MHFGEN+LSR IG SPLST
Sbjct: 47 SVSLPPGRNERRCTSMHFGENELSRNAIGFSPLST 81
Score = 48.9 bits (115), Expect(2) = 1e-12
Identities = 24/48 (50%), Positives = 27/48 (56%)
Frame = -2
Query: 242 LGALADDLGCFPLDDEAYPPPSHCHATLASIRSLADFGKPISPLDHPV 99
+G LA DLGCFPL A P +HC +T IRSL FG P L V
Sbjct: 1 MGTLAGDLGCFPLVHGADPSWTHCRSTFPGIRSLVGFGTPFGALAQSV 48
>gb|ADI18134.1| hypothetical protein [uncultured Verrucomicrobiales bacterium
HF0200_39L05]
Length = 76
Score = 65.9 bits (159), Expect = 2e-12
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +2
Query: 80 VLVGGRALDGLGGLSAYRNQPNSECW-QV*RGSETAGDKLRRREGNSPDHQLR 235
VL GGRAL GLG L+ Y+NQ NSEC GS++A DK+RRREGN+PDH+LR
Sbjct: 17 VLRGGRALIGLGSLTGYQNQLNSECLGSHYPGSQSASDKIRRREGNNPDHRLR 69
>gb|ACO03644.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 159
Score = 49.3 bits (116), Expect(2) = 3e-12
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -1
Query: 105 SSALPPTRTTQRCT*MHFGENQLSRCLIGLSPLST 1
S +LPP R +RCT MHFGEN+LS+ IG SPLST
Sbjct: 47 SVSLPPGRNERRCTSMHFGENELSQNAIGFSPLST 81
Score = 48.9 bits (115), Expect(2) = 3e-12
Identities = 24/48 (50%), Positives = 27/48 (56%)
Frame = -2
Query: 242 LGALADDLGCFPLDDEAYPPPSHCHATLASIRSLADFGKPISPLDHPV 99
+G LA DLGCFPL A P +HC +T IRSL FG P L V
Sbjct: 1 MGTLAGDLGCFPLVHGADPSWTHCRSTFPGIRSLVGFGTPFGALAQSV 48
>ref|WP_026390740.1| hypothetical protein [Acholeplasma axanthum]
Length = 74
Score = 62.8 bits (151), Expect = 4e-11
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +2
Query: 113 GGLSAYRNQPNSECWQV*RGSETAGDKLRRREGNSPDHQLRPLSVC*VGKDVELRRQPGG 292
G S Y Q N EC + S+T GDK+ ++GNSPD QLR + C V K+VE+ +Q GG
Sbjct: 4 GPTSGYWTQLNFECHKSEISSQTVGDKVHGQKGNSPDRQLRSQNSCWVEKEVEMHKQLGG 63
Query: 293 WLGSS 307
WL SS
Sbjct: 64 WLRSS 68
>gb|EUT77524.1| hypothetical protein O310_02010, partial [Staphylococcus aureus
M0125] gi|580047013|gb|EVA80172.1| hypothetical protein
O597_00904, partial [Staphylococcus aureus M0549]
Length = 70
Score = 62.4 bits (150), Expect = 5e-11
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -2
Query: 284 VVYATPHPFPLSTRLGALADDLGCFPLDDEAYPPPSHCHATLASIRSLADFGKP 123
VV+ATPHPFPL+ G LA LGCFP + Y P S L IRSL++FG P
Sbjct: 1 VVWATPHPFPLNIYFGTLAGGLGCFPFEHGPYHPCSDSQVKLIGIRSLSEFGNP 54
>gb|ADI17935.1| hypothetical protein [uncultured Desulfobacterales bacterium
HF0200_07G10]
Length = 81
Score = 53.9 bits (128), Expect(2) = 1e-10
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +2
Query: 80 VLVGGRALDGLGGLSAYRNQPNSECWQV*RGSETAGDKLRRREGNSPDHQLRPLS 244
+ GGRALDGLG Y+ QP E S+T GDK++ R+G SPDHQLR S
Sbjct: 4 IACGGRALDGLGASPGYQTQPIFEFHMWYCRSQTLGDKVQGRKGKSPDHQLRSQS 58
Score = 39.3 bits (90), Expect(2) = 1e-10
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3
Query: 249 AKWERMWSCVDNQEVGLEAA 308
AKWER+W DNQEVGLEAA
Sbjct: 60 AKWERLWEYTDNQEVGLEAA 79
>gb|KAE34487.1| hypothetical protein W610_02615, partial [Staphylococcus aureus
VET0363R] gi|616636821|gb|KAE36074.1| hypothetical
protein W610_02168, partial [Staphylococcus aureus
VET0363R] gi|616640433|gb|KAE39600.1| hypothetical
protein W610_00790, partial [Staphylococcus aureus
VET0363R]
Length = 69
Score = 60.8 bits (146), Expect = 2e-10
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = -2
Query: 281 VYATPHPFPLSTRLGALADDLGCFPLDDEAYPPPSHCHATLASIRSLADFGKP 123
V+ATPHPFPL+ G LA LGCFP + Y P S L IRSL++FG P
Sbjct: 1 VWATPHPFPLNIYFGTLAGGLGCFPFEHGPYHPCSDSQVKLIGIRSLSEFGNP 53