BLASTX nr result
ID: Rehmannia28_contig00045587
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00045587 (1140 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo... 97 2e-18 tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo... 97 3e-18 tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo... 96 6e-18 gb|KQL11580.1| hypothetical protein SETIT_007835mg [Setaria ital... 95 1e-17 emb|CAD40174.2| OSJNBa0061A09.13 [Oryza sativa Japonica Group] 94 3e-17 gb|KQL09745.1| hypothetical protein SETIT_008772mg, partial [Set... 93 7e-17 gb|KQL01322.1| hypothetical protein SETIT_015224mg [Setaria ital... 92 9e-17 gb|KQL01323.1| hypothetical protein SETIT_014964mg [Setaria ital... 92 1e-16 ref|XP_006386682.1| hypothetical protein POPTR_0002s18640g, part... 83 2e-15 gb|ADV58678.1| P194 [Rice tungro bacilliform virus] 89 2e-15 emb|CAC15488.1| polyprotein [Rice tungro bacilliform virus] 86 7e-15 emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus] 87 9e-15 gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus] 86 1e-14 dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]... 86 1e-14 ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform v... 86 1e-14 gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacillifo... 86 2e-14 emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform... 85 3e-14 gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacillifo... 85 4e-14 gb|AFQ62092.1| P194 [Rice tungro bacilliform virus] 84 5e-14 gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus] 84 7e-14 >tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus] Length = 1718 Score = 97.4 bits (241), Expect = 2e-18 Identities = 97/374 (25%), Positives = 177/374 (47%), Gaps = 14/374 (3%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 ++ ++D+ + ++Q ++ ++ I+ +QIY + ++ + + Sbjct: 32 IDELEDIAEVDKQLERYQRDTLRAIRPQQIYCMGFFENKNGLYRISREVELSVLTKPVEL 91 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 KIV K E R G K L+ L D+R + LG Sbjct: 92 KIVAKEFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGAKVLITLLDKRWDTIDKAALGFL 151 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ G +T+GY+ +G NL++ FI +L TN Sbjct: 152 EGDMNENM-LITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFKG-TNLLVSIEFIGRL-TN 208 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + ND IE SKGI + +K SSEE G+EW I I+++ P + Sbjct: 209 RSA-SKYKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYIS 267 Query: 696 YENPRGSISIRFQDYR-WINDNNETESTLGSIEETDNRMNREEELPEYMSNPDFKFLIAK 872 Y+N +G+ SIRF +Y+ D+ ETE++ +I + NR + E+M D + ++ Sbjct: 268 YQNSKGNTSIRFINYKPRTTDDLETEASDRNIID-----NRRHSVSEFMEKLDQE---SE 319 Query: 873 IKFENDRILKQVKIIY-DTFKKRYPEATDEIMEY--QIKRVYNINQDTKECIKIEDSYTN 1043 IK+ ++ LK++ Y ++ K +P+ D+ + + ++ RV + ++ ++I + Sbjct: 320 IKYYENK-LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQ-- 376 Query: 1044 LGKEKILGIKIEEQ 1085 + KI IK +EQ Sbjct: 377 --ETKIEQIKRKEQ 388 >tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus] Length = 1718 Score = 97.1 bits (240), Expect = 3e-18 Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 14/374 (3%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 ++ ++D+ + ++Q ++ ++ I+ +QIY + ++ + + Sbjct: 32 IDELEDIAEVDKQLERYQRDTLRAIRPQQIYCMGFFENKNGLYRISREVELSVLTKPVEL 91 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 KIV K E R G K L+ L D+R + LG Sbjct: 92 KIVAKEFENGLKYSGYKYIHQGMYXIGIKGMTRKKLGAKVLITLLDKRWDTIDKAALGFL 151 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ G +T+GY+ +G NL++ FI +L TN Sbjct: 152 EGDMNENM-LITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFKG-TNLLVSIEFIGRL-TN 208 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + ND IE SKGI + +K SSEE G+EW I I+++ P + Sbjct: 209 RSA-SKYKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYIS 267 Query: 696 YENPRGSISIRFQDYR-WINDNNETESTLGSIEETDNRMNREEELPEYMSNPDFKFLIAK 872 Y+N +G+ SIRF +Y+ D+ ETE++ +I + NR + E+M D + ++ Sbjct: 268 YQNSKGNTSIRFINYKPRTTDDLETEASDRNIID-----NRRHSVSEFMXKLDQE---SE 319 Query: 873 IKFENDRILKQVKIIYD-TFKKRYPEATDEIMEY--QIKRVYNINQDTKECIKIEDSYTN 1043 IK+ ++ LK++ Y+ + K +P+ D+ + + ++ RV + ++ ++I + Sbjct: 320 IKYYENK-LKEINEEYNKSIKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQ-- 376 Query: 1044 LGKEKILGIKIEEQ 1085 + KI IK +EQ Sbjct: 377 --ETKIEQIKRKEQ 388 >tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus] Length = 1711 Score = 96.3 bits (238), Expect = 6e-18 Identities = 97/375 (25%), Positives = 171/375 (45%), Gaps = 12/375 (3%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 ++ ++DV + ++Q ++ ++ I+ +Q+Y + ++ + + Sbjct: 29 IDELKDVAQVDKQLERYQRDTLRAIRPQQVYCMGFFENKNGLYRISREVELSVLTKPVEL 88 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 KIV K E R G K L+ L D+R + LG Sbjct: 89 KIVAKEFENSLKYSGYKYIHQGMYIIGIKGMTRKKLGAKVLITLLDKRWDTINKASLGYL 148 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ + I+ G +T+GY+ +G NL+I FI +L TN Sbjct: 149 EGDMNENM-LITYIAPDLMMPVNEFIDKMSFGFQTKGYEEFKG-TNLLISIEFIGRL-TN 205 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + ND IE SKGI+ + + SEE G++W I FIK + P + Sbjct: 206 RSA-SKYKINVNDVIEKMHSKGIKFMSPLXIDSEERAGEKWPISEFIKNKTLSQPENFIS 264 Query: 696 YENPRGSISIRFQDYRW-INDNNETESTLGSIEETDNRMNREEELPEYMSNPDFKFLIAK 872 Y++ +G++SIRF +Y+ +D+ + ES+ I DNR + EL E + + ++ Sbjct: 265 YQDSKGNVSIRFTNYKTRASDDLDAESSDRBI--IDNRRHSISELMEKLDHE------SE 316 Query: 873 IKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQIKRVYNINQDTKE-CIKIEDSYTNLG 1049 IK+ D++ ++ K +P+ D+ + Y + + I + KE + IE T Sbjct: 317 IKYYEDKLRDIADEYNNSMKSEWPKIRDKEL-YFYRELSRIKKQKKEKSLAIETPRTQ-- 373 Query: 1050 KEKILGIKIEEQTDQ 1094 + KI IK EE ++ Sbjct: 374 EIKIEQIKSEEPREE 388 >gb|KQL11580.1| hypothetical protein SETIT_007835mg [Setaria italica] Length = 897 Score = 95.1 bits (235), Expect = 1e-17 Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 25/384 (6%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 +E ++++I+ E+ ++ ++ I+ +QIY+ + ++ + + Sbjct: 37 IENLEEMIEVERDLERYQRDTLRKIRPQQIYQMGWFENKNGLYRISREVELSVLTEPVQL 96 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 +IV K E R G K L+ L D+R + LG Sbjct: 97 RIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWDSVNKAALGFL 156 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ IG +T+GY+ +G NL++ F+ +L TN Sbjct: 157 EGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVSIEFVGRL-TN 213 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + N+ IE SKGI+ + +K SSEE G+EWNI + I+ + P V Sbjct: 214 RSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPKILKQPKDYVS 272 Query: 696 YENPRGSISIRFQDY--RWINDNNETESTLGSIEETDNRMNREEELPEYMSNPD------ 851 YEN +G SIRF +Y R ++D N + S +IEE R + E+M D Sbjct: 273 YENSKGKTSIRFVNYKERSLDDLNVSTSE-SNIEEA-----RRHSVCEFMEKLDIDNEIK 326 Query: 852 -FKFLIAKIKFEND------RILKQVKIIYDTFKKRYPEATDEIMEYQIKRVYNINQDTK 1010 ++ ++K++ E + RI K+++ + K++ E +++I + + Sbjct: 327 HYEKKLSKVQDEYNTSMIYSRIQKELENNKERVKEKEEVVISEEDQWEINNKILLESYEE 386 Query: 1011 ECIKIEDSYTNLGKEKILGIKIEE 1082 E + I + +++ + I + EE Sbjct: 387 EAVDIIEIHSSKSESHIPSLGNEE 410 >emb|CAD40174.2| OSJNBa0061A09.13 [Oryza sativa Japonica Group] Length = 1342 Score = 94.0 bits (232), Expect = 3e-17 Identities = 95/374 (25%), Positives = 176/374 (47%), Gaps = 14/374 (3%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 ++ ++D+ + ++Q ++ ++ I+ +QIY ++ + + Sbjct: 32 IDELEDIAEVDKQLERYQRDTLRAIRPQQIYCMGFFKNKNGLYRISREVELSVLTKPVEL 91 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXXRSYQG-------EKTLVILHDERHTDLGHGILGTF 344 KIV K E +G K L+ L D+R + LG Sbjct: 92 KIVAKEFENGLKYSGYKYIHQGMYIIGIKGMTRKKLEAKVLITLLDKRWDTIDKAALGFL 151 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ G +T+GY+ +G NL++ FI +L TN Sbjct: 152 EGDMNENM-LITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFKG-TNLLVSIEFIGRL-TN 208 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + ND IE SKGI + +K SSEE G+EW I I+++ P + Sbjct: 209 RSA-SKYKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYIS 267 Query: 696 YENPRGSISIRFQDYR-WINDNNETESTLGSIEETDNRMNREEELPEYMSNPDFKFLIAK 872 Y+N +G+ SIRF +Y+ D+ ETE++ + + R NR + E+M D + ++ Sbjct: 268 YQNSKGNTSIRFINYKPRTTDDLETEAS-----DRNIRDNRRHSVSEFMEKLDQE---SE 319 Query: 873 IKFENDRILKQVKIIY-DTFKKRYPEATDEIMEY--QIKRVYNINQDTKECIKIEDSYTN 1043 IK+ ++ LK++ Y ++ K +P+ ++ + + ++ RV + ++ ++I + Sbjct: 320 IKYYENK-LKEINEEYNNSMKCEWPKIRNKELYFYRELARVKKVKKNEDMAVEIFKNQ-- 376 Query: 1044 LGKEKILGIKIEEQ 1085 + KI IK +EQ Sbjct: 377 --ETKIEQIKRKEQ 388 >gb|KQL09745.1| hypothetical protein SETIT_008772mg, partial [Setaria italica] Length = 898 Score = 92.8 bits (229), Expect = 7e-17 Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 14/350 (4%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 +E ++++I E+ ++ ++ I+ +QIY+ + ++ + + Sbjct: 37 IENLEEMIDVERDLERYQRDTLRKIRPQQIYQMGWFENKNRLYRISREVELSVLTEPVQL 96 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 +IV K E R G K L+ L D+R + LG Sbjct: 97 RIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWDSVNKAALGFL 156 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ IG +T+GY+ +G NL++ F+ +L TN Sbjct: 157 EGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVSIEFVGRL-TN 213 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + N+ IE SKGI+ + +K SSEE G+EWNI + I+ + P V Sbjct: 214 RSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPKILKQPKDYVS 272 Query: 696 YENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN----REEELPEYMSNPDFKFL 863 YEN +G SIRF +Y+ E +L +E + + N R + E+M D Sbjct: 273 YENSKGKTSIRFVNYK--------ERSLDDLEVSTSESNIGEARRHSVCEFMEKLDIDNE 324 Query: 864 IAKIKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQIKRVYNINQDTKE 1013 I ++ L V+ Y+T A E Y + +Y +N+ KE Sbjct: 325 IK----HYEKKLSNVQDEYNTSMICEWSAIREKELYFRRELYRLNKIKKE 370 >gb|KQL01322.1| hypothetical protein SETIT_015224mg [Setaria italica] Length = 869 Score = 92.4 bits (228), Expect = 9e-17 Identities = 92/350 (26%), Positives = 155/350 (44%), Gaps = 14/350 (4%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 +E ++++I E+ ++ ++ I+ +QIY+ + ++ + + Sbjct: 37 IENLEEMIDVERDLERYQRDTLRKIRPQQIYQMGWFENKNGLYRISREVELSVLTEPVQL 96 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 +IV K E R G K L+ L D+R + LG Sbjct: 97 RIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWDSVNKAALGFL 156 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ IG +T+GY+ +G NL++ F+ +L TN Sbjct: 157 EGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVSIEFVGRL-TN 213 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + N+ IE SKGI+ + +K SSEE G+EWNI + I+ + P V Sbjct: 214 RSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPKIFKQPKDYVS 272 Query: 696 YENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN----REEELPEYMSNPDFKFL 863 YEN +G SIRF +Y+ E +L +E + + N R + E+M D Sbjct: 273 YENSKGKTSIRFVNYK--------ERSLDDLEVSTSESNIGEARRHSVCEFMEKLDIDNE 324 Query: 864 IAKIKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQIKRVYNINQDTKE 1013 I ++ L +V+ Y+T A E Y + +Y +N+ KE Sbjct: 325 IK----HYEKKLSKVQDEYNTSMICEWTAIREKELYFRRELYRLNKIKKE 370 >gb|KQL01323.1| hypothetical protein SETIT_014964mg [Setaria italica] Length = 1151 Score = 92.4 bits (228), Expect = 1e-16 Identities = 92/350 (26%), Positives = 155/350 (44%), Gaps = 14/350 (4%) Frame = +3 Query: 6 VERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXXSVAKEDQQLNF 185 +E ++++I E+ ++ ++ I+ +QIY+ + ++ + + Sbjct: 37 IENLEEMIDVERDLERYQRDTLRKIRPQQIYQMGWFENKNGLYRISREVELSVLTEPVQL 96 Query: 186 KIVEKTKEXXXXXXXXXXXXXXXXX-------RSYQGEKTLVILHDERHTDLGHGILGTF 344 +IV K E R G K L+ L D+R + LG Sbjct: 97 RIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWDSVNKAALGFL 156 Query: 345 EIDMTKNNGKIIYFCPDYLIDAKD-IEYKKIGIKTRGYKFQEGINNLIIKTGFIEKLCTN 521 E DM +N I Y PD ++ K+ I+ IG +T+GY+ +G NL++ F+ +L TN Sbjct: 157 EGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVSIEFVGRL-TN 213 Query: 522 CNVICNLKSDKNDQIEV--SKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + K + N+ IE SKGI+ + +K SSEE G+EWNI + I+ + P V Sbjct: 214 RSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPKIFKQPKDYVS 272 Query: 696 YENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN----REEELPEYMSNPDFKFL 863 YEN +G SIRF +Y+ E +L +E + + N R + E+M D Sbjct: 273 YENSKGKTSIRFVNYK--------ERSLDDLEVSTSESNIGEARRHSVCEFMEKLDIDNE 324 Query: 864 IAKIKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQIKRVYNINQDTKE 1013 I ++ L +V+ Y+T A E Y + +Y +N+ KE Sbjct: 325 IK----HYEKKLSKVQDEYNTSMICEWTAIREKELYFRRELYRLNKIKKE 370 >ref|XP_006386682.1| hypothetical protein POPTR_0002s18640g, partial [Populus trichocarpa] gi|550345323|gb|ERP64479.1| hypothetical protein POPTR_0002s18640g, partial [Populus trichocarpa] Length = 153 Score = 82.8 bits (203), Expect = 2e-15 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Frame = +3 Query: 345 EIDMTKNNGKIIYFC--PDYLIDAKDI-EYKKIGIKTRGYKFQEGINNLIIKTGFIEKLC 515 E+D+ +N G + C PD+L+D KD ++ KIGI+T+G++ +G NNL++ GF+ K+ Sbjct: 9 ELDLNENRG---FLCCSPDFLLDMKDFTDHIKIGIQTKGFEQFKG-NNLLLCIGFLGKMG 64 Query: 516 TNCNVICNLKSDKNDQIEVSKGIQAIPRIKYSSEENTGQEWNIESFIKTEEKLIPHKNVM 695 + N +S ++ I KYS+E+ G EW ++ FIK E L P + Sbjct: 65 RSSNTRYRFES-----------LKMIKPTKYSAEDLAGLEWKLDDFIKRESILAPQSPLT 113 Query: 696 YENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN 812 Y+N G S+RF DY + S +ETD MN Sbjct: 114 YKNNIGETSVRFTDY-----TKTLARDIDSDQETDIEMN 147 >gb|ADV58678.1| P194 [Rice tungro bacilliform virus] Length = 1674 Score = 88.6 bits (218), Expect = 2e-15 Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 6/280 (2%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +V+ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL I I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQISSQGITMVAPMEIDSSHLD 246 Query: 627 GQEWNIESF-IKTEEKLIPHKNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDN 803 G EWN+ F I+ +P K ++Y+N RG S+RF +Y ++ TE + S E+ D Sbjct: 247 GNEWNLSKFMIQEGTSRVPSKALIYQNLRGGESLRFSNYAQTKMHDPTE--INSDEDEDL 304 Query: 804 RMNREEELPEYMSNPDFKFLIAKIKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQ-IK 980 ++ L E ++ F ++ + +RI ++ K + + + E + ++ I+ Sbjct: 305 KI-----LGEQLNAKMATFQEETLEQKLERIKEEKKQLLAKLEAKKKEIESKSLKMAVIE 359 Query: 981 RVYNINQDTKECIKIEDSYTNLGKEKI--LGIKIEEQTDQ 1094 +N N + ++DSY+ L + LG+ E DQ Sbjct: 360 DDFNPNNE-----YLDDSYSELEDLEFEQLGLTGWEDLDQ 394 >emb|CAC15488.1| polyprotein [Rice tungro bacilliform virus] Length = 531 Score = 86.3 bits (212), Expect = 7e-15 Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 8/282 (2%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +V+ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 22 GTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 80 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL I I +L T N+ K + D +E S+GI + ++ Sbjct: 81 YENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQISSQGITMVAPMEIDPSHLD 137 Query: 627 GQEWNIESF-IKTEEKLIPHKNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDN 803 G EWN+ F I+ +P+K ++Y+N G S+RF +Y ++ TE + S E+ D Sbjct: 138 GNEWNLSKFMIQEGTSRVPNKALIYQNLHGGESLRFSNYTQTKMHDPTE--INSDEDEDL 195 Query: 804 RMNREEELPEYMSNPDFKFL---IAKIKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQ 974 ++ E+L M+ + L + +IK E ++L +++ KK+ EA M Sbjct: 196 KI-LGEQLNAKMATFQEETLEQKLERIKEEKKQLLAKLEA-----KKKEIEAKSLNMAV- 248 Query: 975 IKRVYNINQDTKECIKIEDSYTNLGKEKI--LGIKIEEQTDQ 1094 I+ +N N + ++DSY+ L + LG+ E DQ Sbjct: 249 IEDDFNPNNE-----YLDDSYSELEDLEFEQLGLTGWEDLDQ 285 >emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus] Length = 1674 Score = 86.7 bits (213), Expect = 9e-15 Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 8/282 (2%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +V+ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL I I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQISSQGITMVAPMEIDSSHLD 246 Query: 627 GQEWNIESF-IKTEEKLIPHKNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDN 803 G EWN+ F I+ +P K ++Y+N G S+RF +Y ++ TE + S E+ D Sbjct: 247 GNEWNLSKFMIQEGTSRVPSKALIYQNLHGGESLRFSNYTQTKMHDPTE--INSDEDEDL 304 Query: 804 RMNREEELPEYMSNPDFKFL---IAKIKFENDRILKQVKIIYDTFKKRYPEATDEIMEYQ 974 ++ E+L M+ + L + +IK E ++L +++ KK E+ M Sbjct: 305 KI-LGEQLNAKMATLQEETLEQKLERIKREKKQVLAKLEA-----KKNEIESNPYKMAV- 357 Query: 975 IKRVYNINQDTKECIKIEDSYTNLGKEKI--LGIKIEEQTDQ 1094 I+ +N N + ++DSY+ L + LG+ E DQ Sbjct: 358 IEDDFNPNNE-----YLDDSYSELEDLEFEQLGLTGWEDLDQ 394 >gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus] Length = 1675 Score = 86.3 bits (212), Expect = 1e-14 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 19/253 (7%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +++ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMIMFYDDSFGKAREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL + I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSVAIKTIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLD 246 Query: 627 GQEWNIESFIKTEE-KLIPHKNVMYENPRGSISIRFQDYRWI-------NDNNETESTLG 782 G EW++ F+ E +P K ++Y+N +G S+RF +Y+ N+++E E Sbjct: 247 GNEWDLSKFLNHENTSRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKI 306 Query: 783 SIEETDNRMNR-------EEELPEYMS--NPDFKFLIAKIKFENDRILKQVKIIYDTFKK 935 E+ + +M R EEEL E + + + +IAK++ + K + I+ D F Sbjct: 307 LGEQLNIKMARFYTMQTPEEELREVIQQLEREKQAMIAKLEAKMKESSK-MAIVEDNFNP 365 Query: 936 RYPEATDEIMEYQ 974 D EY+ Sbjct: 366 NNEYLEDTYSEYE 378 >dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus] gi|229052|prf||1817177A capsid protein Length = 1675 Score = 86.3 bits (212), Expect = 1e-14 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 19/253 (7%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +++ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMIMFYDDSFGKAREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL + I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSVAIKTIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLD 246 Query: 627 GQEWNIESFIKTEE-KLIPHKNVMYENPRGSISIRFQDYRWI-------NDNNETESTLG 782 G EW++ F+ E +P K ++Y+N +G S+RF +Y+ N+++E E Sbjct: 247 GNEWDLSKFLNHENTSRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKI 306 Query: 783 SIEETDNRMNR-------EEELPEYMS--NPDFKFLIAKIKFENDRILKQVKIIYDTFKK 935 E+ + +M R EEEL E + + + +IAK++ + K + I+ D F Sbjct: 307 LGEQLNIKMARFYTMQTPEEELREVIQQLEREKQAMIAKLEAKMKESSK-MAIVEDNFNP 365 Query: 936 RYPEATDEIMEYQ 974 D EY+ Sbjct: 366 NNEYLEDTYSEYE 378 >ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform virus] gi|130653|sp|P27502.1|POL_RTBVP RecName: Full=Polyprotein P3; AltName: Full=P194 protein; Contains: RecName: Full=Putative movement protein; Short=MP; Contains: RecName: Full=Capsid protein; AltName: Full=Coat protein; Short=CP; Contains: RecName: Full=Protease; Short=PR; Contains: RecName: Full=Reverse transcriptase/Ribonuclease H; Short=RT; AltName: Full=p55; Flags: Precursor gi|61913|emb|CAA40997.1| ORF P194 [Rice tungro bacilliform virus] Length = 1675 Score = 86.3 bits (212), Expect = 1e-14 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 19/253 (7%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +++ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMIMFYDDSFGKAREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL + I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSVAIKTIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLD 246 Query: 627 GQEWNIESFIKTEE-KLIPHKNVMYENPRGSISIRFQDYRWI-------NDNNETESTLG 782 G EW++ F+ E +P K ++Y+N +G S+RF +Y+ N+++E E Sbjct: 247 GNEWDLSKFLNHENTSRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKI 306 Query: 783 SIEETDNRMNR-------EEELPEYMS--NPDFKFLIAKIKFENDRILKQVKIIYDTFKK 935 E+ + +M R EEEL E + + + +IAK++ + K + I+ D F Sbjct: 307 LGEQLNIKMARFYTMQTPEEELREVIQQLEREKQAMIAKLEAKMKESSK-MAIVEDNFNP 365 Query: 936 RYPEATDEIMEYQ 974 D EY+ Sbjct: 366 NNEYLEDTYSEYE 378 >gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacilliform virus] Length = 1675 Score = 85.9 bits (211), Expect = 2e-14 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 19/253 (7%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +++ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMIMFYDDSFGKARKASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL + I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSVAIKTIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLD 246 Query: 627 GQEWNIESFIKTEE-KLIPHKNVMYENPRGSISIRFQDYRWI-------NDNNETESTLG 782 G EW++ F+ E +P K ++Y+N +G S+RF +Y+ N+++E E Sbjct: 247 GNEWDLSKFLNHENTSRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKI 306 Query: 783 SIEETDNRMNR-------EEELPEYMS--NPDFKFLIAKIKFENDRILKQVKIIYDTFKK 935 E+ + +M R EEEL E + + + +IAK++ + K + I+ D F Sbjct: 307 LGEQLNIKMARFYTMQTPEEELREVIQQLEREKQAMIAKLEAKMKESSK-MAIVEDNFNP 365 Query: 936 RYPEATDEIMEYQ 974 D EY+ Sbjct: 366 NNEYLEDTYSEYE 378 >emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform virus] Length = 1674 Score = 85.1 bits (209), Expect = 3e-14 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 17/251 (6%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +V+ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL I I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQISSQGITMVAPMEIDSSHLD 246 Query: 627 GQEWNIESFIKTE-EKLIPHKNVMYENPRGSISIRFQDYRWI---------NDNNETEST 776 G EWN+ F+ E +P K ++Y+N G S+RF +Y +D +E Sbjct: 247 GNEWNLSKFMTQEGTSRVPSKALIYQNLHGGESLRFSNYSQTKMHDPAEINSDEDEDLKI 306 Query: 777 LGSIEETDNRMNREEELPEYMS--NPDFKFLIAKIKFENDRILK---QVKIIYDTFKKRY 941 LG +EE L + + + K L+AK++ + I ++ +I D F Sbjct: 307 LGEQLNVKMATFQEETLEQKLERIKEEKKQLLAKLEAKKKEIESKSLKMAVIEDDFNPNN 366 Query: 942 PEATDEIMEYQ 974 D E + Sbjct: 367 EYLDDSYSELE 377 >gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacilliform virus] Length = 1677 Score = 84.7 bits (208), Expect = 4e-14 Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 19/253 (7%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +++ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMIMFYDDSFGKAREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL + I +L T N+ K + D +E S+GI + ++ S Sbjct: 190 YENYEG-KNLSVAIKTIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLD 246 Query: 627 GQEWNIESFIKTEE-KLIPHKNVMYENPRGSISIRFQDYRW------INDNNETESTLGS 785 G EW++ F+ E +P K ++Y+N +G S+RF +Y+ I +N++ + L Sbjct: 247 GNEWDLSKFLNHENTSRVPTKALIYQNLQGGESLRFSNYKQTRMHDPIENNSDEDENLKI 306 Query: 786 I-EETDNRMNR-------EEELPEYMS--NPDFKFLIAKIKFENDRILKQVKIIYDTFKK 935 + E+ + +M R EEEL E + + + +I K++ + K + I+ D F Sbjct: 307 LGEQLNIKMARFYTMQTPEEELLEVIQQLEREKQAMIEKLEAKMKESSK-MAIVEDNFNP 365 Query: 936 RYPEATDEIMEYQ 974 D EY+ Sbjct: 366 NNEYLEDTYSEYE 378 >gb|AFQ62092.1| P194 [Rice tungro bacilliform virus] Length = 1674 Score = 84.3 bits (207), Expect = 5e-14 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 1/184 (0%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +V+ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 131 GTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 189 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIEVSKGIQAIPRIKYSSEENTGQ 632 Y+ EG NL I I +L TN + + S+GI + ++ S G Sbjct: 190 YENYEG-KNLSIAIKTIGRLTTNIQARYKMNVKNIVEQISSQGITMVAPMEIDSSHLDGN 248 Query: 633 EWNIESF-IKTEEKLIPHKNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRM 809 EWN+ F I+ +P K ++Y+N G S+RF +Y ++ TE + S E+ D ++ Sbjct: 249 EWNLSKFMIQEGTSRVPSKALIYQNLHGGESLRFSNYTQTKMHDPTE--INSDEDEDLKI 306 Query: 810 NREE 821 E+ Sbjct: 307 LGEQ 310 >gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus] Length = 1677 Score = 84.0 bits (206), Expect = 7e-14 Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 3/186 (1%) Frame = +3 Query: 273 GEKTLVILHDERHTDLGHGILGTFEIDMTKNNGKIIYFCPDYLIDAKDIEYKKIGIKTRG 452 G K +++ +D+ +G+ E+DM G + Y CPD+ KD+ + KIGI+T G Sbjct: 134 GTKVMIMFYDDSFGKAREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLG 192 Query: 453 YKFQEGINNLIIKTGFIEKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPRIKYSSEENT 626 Y+ EG NL + I +L T N+ K + D +E S+GI + ++ S Sbjct: 193 YENYEG-KNLSVAIKTIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLD 249 Query: 627 GQEWNIESFIKTEE-KLIPHKNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDN 803 G EW++ F+ E +P K ++Y+N G S+RF +Y+ ++ TE+ S E+ D Sbjct: 250 GNEWDLSKFLNQENTSRVPTKALIYQNLHGGESLRFSNYKQTRMHDPTEN--NSDEDEDL 307 Query: 804 RMNREE 821 ++ E+ Sbjct: 308 KILGEQ 313