BLASTX nr result

ID: Rehmannia28_contig00045160 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00045160
         (823 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ30045.1| conserved hypothetical protein [Magnetospirillum...    62   6e-08
gb|EAS50136.1| hypothetical protein SI859A1_01496 [Aurantimonas ...    57   5e-07
gb|KIS04702.1| hypothetical protein N594_01555 [Streptococcus eq...    47   8e-06
emb|CCG06603.1| unnamed protein product, partial [Pararhodospiri...    54   9e-06

>emb|CAJ30045.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1] gi|566555979|emb|CDK99198.1| protein of unknown
           function [Magnetospirillum gryphiswaldense MSR-1 v2]
          Length = 259

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = +1

Query: 394 PLSVCS*LDHLVSGLIFLTLCFFQTRFYYAYIFQFKLAKKINSLTHYTKGTXXXXXXXXX 573
           P S C  +DH VSGL+  T    QTRF  AY ++ KLA   NSLTHYTKGT         
Sbjct: 27  PPSTCPWIDHSVSGLMHATRRPIQTRFRCAYTYRLKLAAYTNSLTHYTKGTPSPFKRAPT 86

Query: 574 XXKYSISNSISL 609
             ++S+S ++SL
Sbjct: 87  ACRHSVSGTVSL 98


>gb|EAS50136.1| hypothetical protein SI859A1_01496 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 100

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = +1

Query: 400 SVCS*LDHLVSGLIFLTLCFFQTRFYYAYIFQFKLAKKINSLTHYTKGT 546
           S CS LDH VSGLI  T    QTRF YA  ++ KLA++  SLTHYTKGT
Sbjct: 7   STCSWLDHSVSGLIRRTERPVQTRFRYASTYRLKLARQTKSLTHYTKGT 55


>gb|KIS04702.1| hypothetical protein N594_01555 [Streptococcus equi subsp.
           zooepidemicus Sz16]
          Length = 149

 Score = 46.6 bits (109), Expect(2) = 8e-06
 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
 Frame = +1

Query: 373 PSNKLHQPLSVCS*LDHLVSGLIFLTLCFFQTRFYYAYIFQFKLAKKINSLTHYTKGTXX 552
           P  +L  P S CS + H+VSGL   T    +  F  A   Q  LA+K NS  H TKGT  
Sbjct: 54  PPVRLTAP-STCSWVGHMVSGLRPRTYALLRLGFPSAPSLQLNLARKRNSPVHSTKGT-- 110

Query: 553 XXXXXXXXXKYSISNSISLAY-----ALFTFPSRYFFTL 654
                    +  +     + +      LFTFPSRY+FT+
Sbjct: 111 --LSPINGLELLVGTRFQVLFHSPPGVLFTFPSRYWFTI 147



 Score = 31.6 bits (70), Expect(2) = 8e-06
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +2

Query: 221 PAPIQSFTFNNFYNYTLPT*ISQKTSYL*V*LAFHP*SQIILVYCHIHKFDPP 379
           P+P Q  T    Y    P  IS++TSYL V L F    Q+I    ++  F PP
Sbjct: 3   PSPKQCSTSKRLYIDASPKAISERTSYLQVRLEFLRYPQVIQALFNVPWFGPP 55


>emb|CCG06603.1| unnamed protein product, partial [Pararhodospirillum photometricum
           DSM 122]
          Length = 114

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 29/51 (56%), Positives = 34/51 (66%)
 Frame = +1

Query: 394 PLSVCS*LDHLVSGLIFLTLCFFQTRFYYAYIFQFKLAKKINSLTHYTKGT 546
           P S C  LDH VSGLI  T    +TRF  A  ++ KLA++I SLTHYTKGT
Sbjct: 21  PPSTCPWLDHPVSGLIRRTRRPLKTRFRCASTYRLKLARQIKSLTHYTKGT 71


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