BLASTX nr result

ID: Rehmannia28_contig00043531 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00043531
         (385 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001892072.1| T-cell receptor beta chain ANA 11 [Brugia ma...    52   2e-06
emb|CDQ94941.1| unnamed protein product [Oncorhynchus mykiss]          54   3e-06
ref|XP_003151341.1| hypothetical protein LOAG_15806 [Loa loa] gi...    51   7e-06
ref|XP_002460685.1| hypothetical protein SORBIDRAFT_02g033135, p...    50   7e-06

>ref|XP_001892072.1| T-cell receptor beta chain ANA 11 [Brugia malayi]
          Length = 90

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 24/51 (47%), Positives = 32/51 (62%)
 Frame = +2

Query: 191 RLTLRSHTHTLIYTHELTHTQ*DTHDLNIHTHTKYHILSVLHSLTHTHTYI 343
           +++  +HTHT  +TH  THT   TH  + HTHT  H  +  H+ THTHTYI
Sbjct: 14  KISTHTHTHTHTHTHTHTHTHTHTHT-HTHTHTHTHTHTHTHTHTHTHTYI 63


>emb|CDQ94941.1| unnamed protein product [Oncorhynchus mykiss]
          Length = 193

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +2

Query: 206 SHTHTLIYTHELTHTQ*DTHDLNIHTHTKYHILSVLHSLTHTHTY 340
           +HTHT  +TH  THT  DTHD + HTHT  H  +  H+ THTHT+
Sbjct: 125 THTHTHTHTHTHTHTH-DTHDTHTHTHTHTHTHTHTHTHTHTHTH 168


>ref|XP_003151341.1| hypothetical protein LOAG_15806 [Loa loa]
           gi|307753494|gb|EFO12728.1| hypothetical protein
           LOAG_15806 [Loa loa]
          Length = 103

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 22/47 (46%), Positives = 28/47 (59%)
 Frame = +2

Query: 200 LRSHTHTLIYTHELTHTQ*DTHDLNIHTHTKYHILSVLHSLTHTHTY 340
           + +HTHT  +TH  THT    H  N HTH   HI + +H  THTHT+
Sbjct: 57  IHTHTHTHTHTHTHTHTHIHIHTHNTHTHIHIHIHTHIHIHTHTHTH 103


>ref|XP_002460685.1| hypothetical protein SORBIDRAFT_02g033135, partial [Sorghum
           bicolor]
          Length = 88

 Score = 50.4 bits (119), Expect = 7e-06
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = +2

Query: 206 SHTHTLIYTHELTHTQ*DTHDLNIHTHTKYHILSVLHSLTHTHTY 340
           +HTHT  +TH  THT   TH  + HTHT  H  +  H+ THTHT+
Sbjct: 21  THTHTHTHTHTHTHTHTHTHTPHTHTHTHTHTHTHTHTHTHTHTH 65


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