BLASTX nr result
ID: Rehmannia28_contig00041321
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00041321
(423 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP01068.1| unnamed protein product [Coffea canephora] 60 4e-08
ref|XP_011100983.1| PREDICTED: uncharacterized protein LOC105179... 59 9e-08
ref|XP_004292014.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 58 2e-07
ref|XP_012857182.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 58 3e-07
ref|XP_011079711.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 58 3e-07
gb|KVH98557.1| Plant organelle RNA recognition domain-containing... 58 3e-07
ref|XP_008219467.1| PREDICTED: uncharacterized protein LOC103319... 55 1e-06
ref|XP_015072848.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 56 2e-06
ref|XP_004237920.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 56 2e-06
ref|XP_009776065.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 55 2e-06
ref|XP_009613133.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 55 3e-06
ref|XP_007222730.1| hypothetical protein PRUPE_ppa006492mg [Prun... 54 7e-06
ref|XP_008383993.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT... 54 1e-05
>emb|CDP01068.1| unnamed protein product [Coffea canephora]
Length = 413
Score = 60.5 bits (145), Expect = 4e-08
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +TQ L PH E IL RD +FR +KT +YLSKQP QVLLLD+ K
Sbjct: 61 KKRKKKESPRTKLVQTQPNLSPHLENILHRDAHFRFLTKTKEYLSKQPQQVLLLDEAGKL 120
Query: 302 SPQLGF 319
QLGF
Sbjct: 121 HQQLGF 126
>ref|XP_011100983.1| PREDICTED: uncharacterized protein LOC105179086 [Sesamum indicum]
Length = 392
Score = 59.3 bits (142), Expect = 9e-08
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Frame = +2
Query: 56 HFLHRLPLLYFFPHHQNQEI*-------------EKVQERRKTTNQTCSNPETQSKLVPH 196
H L + L+ F PHH I + ++R+K + + +TQ ++PH
Sbjct: 5 HHLSKTSLIPFRPHHVFSAISHFSTSFLITKTPKKFKKKRKKKDSPRTTLVQTQPNIIPH 64
Query: 197 FETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKTSPQLGF 319
FE IL RD +FR +K ++LSKQP VL LDD K QLGF
Sbjct: 65 FENILLRDAHFRFLTKAKEFLSKQPHHVLRLDDAGKLHQQLGF 107
>ref|XP_004292014.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Fragaria vesca
subsp. vesca]
Length = 411
Score = 58.2 bits (139), Expect = 2e-07
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +2
Query: 122 KVQERRKTTNQTCSNP-ETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDG 292
K ++RRK + + P +TQ L+PH E I+ RD +FR +KT YLSKQP +VL LDD
Sbjct: 47 KFKKRRKKQDSPRTKPVQTQPNLLPHLERIVTRDAHFRFLTKTKDYLSKQPHRVLRLDDA 106
Query: 293 KKTSPQLGF 319
K +LGF
Sbjct: 107 GKLHRELGF 115
>ref|XP_012857182.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Erythranthe
guttata]
Length = 391
Score = 57.8 bits (138), Expect = 3e-07
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +T+ L+ HFE+IL RD +FR +KT +YLSKQP Q+L LDD K
Sbjct: 45 KKRKKKESPRTKLVQTEPNLISHFESILTRDAHFRFLTKTKEYLSKQPQQILRLDDAGKL 104
Query: 302 SPQLGF 319
LGF
Sbjct: 105 HQPLGF 110
>ref|XP_011079711.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Sesamum
indicum] gi|747042674|ref|XP_011079719.1| PREDICTED:
protein ROOT PRIMORDIUM DEFECTIVE 1-like [Sesamum
indicum] gi|747042676|ref|XP_011079727.1| PREDICTED:
protein ROOT PRIMORDIUM DEFECTIVE 1-like [Sesamum
indicum] gi|747042678|ref|XP_011079735.1| PREDICTED:
protein ROOT PRIMORDIUM DEFECTIVE 1-like [Sesamum
indicum]
Length = 392
Score = 57.8 bits (138), Expect = 3e-07
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + + +TQ ++PHFE IL RD +FR +KT ++LSKQP +VL LDD K
Sbjct: 42 KKRKKKDSPRTTLVQTQPSIIPHFENILLRDSHFRFLTKTKEFLSKQPHEVLRLDDAGKL 101
Query: 302 SPQLGF 319
+LGF
Sbjct: 102 HQRLGF 107
>gb|KVH98557.1| Plant organelle RNA recognition domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 405
Score = 57.8 bits (138), Expect = 3e-07
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFRS--KTMKYLSKQPLQVLLLDDGKKT 301
++R+K + + + +S+ +PHFE +L RD +FR KT +YLSKQP QVL LDD K
Sbjct: 59 KKRKKKESARTKHVQHESECIPHFEKVLHRDNHFRFFIKTKEYLSKQPQQVLCLDDAGKL 118
Query: 302 SPQLGF 319
+LGF
Sbjct: 119 HRELGF 124
>ref|XP_008219467.1| PREDICTED: uncharacterized protein LOC103319675, partial [Prunus
mume]
Length = 189
Score = 55.1 bits (131), Expect = 1e-06
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +TQ L+PHFE I+ RD +FR +K+ +LSKQP +VL LDD K
Sbjct: 51 KKRKKDESPRTKLVQTQPNLIPHFEHIVERDAHFRFLTKSRDFLSKQPHRVLRLDDAGKL 110
Query: 302 SPQLGF 319
+LGF
Sbjct: 111 HRELGF 116
>ref|XP_015072848.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii]
Length = 409
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +TQ + PHFE IL RD +FR +KT ++LSKQP VL LDD K
Sbjct: 57 KKRKKKESPRTKLVQTQPNINPHFENILFRDTHFRFLTKTKEFLSKQPHHVLPLDDAGKL 116
Query: 302 SPQLGF 319
QLGF
Sbjct: 117 HQQLGF 122
>ref|XP_004237920.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum
lycopersicum]
Length = 409
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +TQ + PHFE IL RD +FR +KT ++LSKQP VL LDD K
Sbjct: 57 KKRKKKESPRTKLVQTQPNINPHFENILFRDTHFRFLTKTKEFLSKQPHHVLPLDDAGKL 116
Query: 302 SPQLGF 319
QLGF
Sbjct: 117 HQQLGF 122
>ref|XP_009776065.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
sylvestris]
Length = 403
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K +TQ ++P+FE IL RD +FR +KT ++LSKQP VL LDD K
Sbjct: 51 KKRKKKDFPRTKLVQTQPNIIPYFENILVRDTHFRFLTKTKEFLSKQPHHVLRLDDAGKL 110
Query: 302 SPQLGF 319
QLGF
Sbjct: 111 HQQLGF 116
>ref|XP_009613133.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
tomentosiformis]
Length = 390
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + + +TQ ++P+FE IL RD + R +KT ++LSKQP VL LDD K
Sbjct: 47 KKRKKKESPRTTLVQTQPNIIPYFENILVRDTHLRFLTKTKEFLSKQPHHVLRLDDAGKL 106
Query: 302 SPQLGF 319
QLGF
Sbjct: 107 HQQLGF 112
>ref|XP_007222730.1| hypothetical protein PRUPE_ppa006492mg [Prunus persica]
gi|462419666|gb|EMJ23929.1| hypothetical protein
PRUPE_ppa006492mg [Prunus persica]
Length = 409
Score = 53.9 bits (128), Expect = 7e-06
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +TQ L+PHFE I+ RD ++R +K+ +LSKQP +VL LDD K
Sbjct: 57 KKRKKDESPRTKLVQTQPNLIPHFEHIVERDAHYRFLTKSRDFLSKQPHRVLRLDDAGKL 116
Query: 302 SPQLGF 319
+LGF
Sbjct: 117 HRELGF 122
>ref|XP_008383993.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE
1, partial [Malus domestica]
Length = 440
Score = 53.5 bits (127), Expect = 1e-05
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 QERRKTTNQTCSNPETQSKLVPHFETILPRDVNFR--SKTMKYLSKQPLQVLLLDDGKKT 301
++R+K + +TQ L+PHFE I+ RD FR +K+ +LSKQP +VL LDD K
Sbjct: 79 KKRKKDESPRTKLVQTQPNLIPHFEHIVERDAYFRFLTKSKDFLSKQPHRVLRLDDAGKL 138
Query: 302 SPQLGF 319
+LGF
Sbjct: 139 YRELGF 144